SubgroupSmoker 12 Weeks P1...1 SubgroupSmoker 12 Weeks P1...2 SubgroupSmoker 12 Weeks P1...3 SubgroupSmoker 12 Weeks P1...4 SubgroupSmoker 12 Weeks P1...5 SubgroupSmoker 12 Weeks P1...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Actinomyces sp._HMT_897 (SP1) -0.150638118723638 0.467682334731801 -0.322094951074053 0.747380763098727 1 FALSE Capnocytophaga endodontalis (SP101) -0.106509204096082 0.350590428354979 -0.30379952069952 0.761280631918396 1 FALSE Prevotella veroralis (SP102) -0.217126026096621 0.416051045856687 -0.521873525517858 0.601758392506181 1 FALSE Selenomonas artemidis (SP103) 0.357377304946053 0.275446808446028 1.29744580074189 0.194477842284881 1 FALSE Filifactor alocis (SP107) 0.197086026204463 0.385403095599539 0.511376344546152 0.6090875558057 1 FALSE Actinomyces israelii (SP109) 0.657026682589695 0.505112558529654 1.30075301335261 0.193343009800597 1 FALSE Prevotella pleuritidis (SP11) 0.387468857564657 0.473529932572437 0.818256314779816 0.413210845018258 1 FALSE Prevotella oulorum (SP111) -0.666683325006523 0.500126822379008 -1.33302853431303 0.182522439989016 1 FALSE Parvimonas sp._HMT_110 (SP112) 0.367268339319242 0.445683306473465 0.824056755065177 0.409907310408002 1 FALSE Treponema sp._HMT_231 (SP114) -0.626332076099054 0.400612552214991 -1.5634359748242 0.117950084046953 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP116) -0.396611880968147 0.326144866326319 -1.21606047470735 0.223961885759498 1 FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP117) -0.904903620855897 0.577620183502272 -1.5666066503584 0.117206662422187 1 FALSE Prevotella sp._HMT_317 (SP118) -0.211367463441735 0.501993213649454 -0.421056416091981 0.673713886292577 1 FALSE Prevotella loescheii (SP119) -0.0476538941914613 0.437866677872487 -0.108831972377991 0.913335764139029 1 FALSE Streptococcus oralis (SP12) 0.0416744064612895 0.606010188585332 0.0687684914317597 0.945173898887261 1 FALSE Schaalia sp._HMT_180 (SP121) 0.436904712988013 0.433723665289741 1.00733427283971 0.313774165102988 1 FALSE Schaalia sp._HMT_178 (SP122) -0.33980588179773 0.453883783970515 -0.748662749801619 0.454060500709421 1 FALSE Streptococcus cristatus (SP123) -0.158866080386192 0.568598813009132 -0.279399247327729 0.779938448637662 1 FALSE Prevotella salivae (SP124) -0.043173259658021 0.40798933811586 -0.105819578171822 0.915725502870287 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP125) -0.229283132827904 0.475616468251545 -0.482075681001525 0.629752184879133 1 FALSE Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP128) -0.0569096166065602 0.294382873471514 -0.193318367795833 0.846709642229576 1 FALSE Prevotella maculosa (SP129) -0.49636344443641 0.415789461113209 -1.19378553537042 0.232561871232458 1 FALSE Selenomonas sputigena (SP13) -0.427699282388874 0.54130939554532 -0.790119820399581 0.429457795620151 1 FALSE Lautropia mirabilis (SP131) 0.807913453115631 0.49504492780201 1.6320002645068 0.102679430468337 1 FALSE Porphyromonas endodontalis (SP132) 0.778562426228888 0.501529230051168 1.55237696943298 0.120572050773463 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP135) -0.834233656038591 0.483467215742136 -1.72552270117844 0.0844333163026395 1 FALSE Olsenella sp._HMT_807 (SP136) 0.654939616576957 0.505268262052765 1.29622156340499 0.194899162536599 1 FALSE Actinomyces sp._HMT_525 (SP137) -0.203059954767292 0.511754759504777 -0.396791531482369 0.691521196101102 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP14) 0.0218675565776017 0.476162843224072 0.0459245337782714 0.963370399676512 1 FALSE Capnocytophaga sp._HMT_864 (SP140) -0.277073598070189 0.417445142001791 -0.66373654929011 0.506858942338686 1 FALSE Schaalia odontolytica (SP141) -0.70368295443258 0.463557553307286 -1.51800558401454 0.129012990974521 1 FALSE Actinomyces viscosus (SP146) 0.210373008702484 0.353820834520487 0.594574960481313 0.552127621681145 1 FALSE Streptococcus intermedius (SP147) 0.126496183006282 0.593528705578137 0.213125636245455 0.831228969142765 1 FALSE Campylobacter gracilis (SP151) 0.0209190038103979 0.552799669066812 0.037841925350121 0.969813716700505 1 FALSE Aggregatibacter aphrophilus (SP152) 0.597681778308548 0.307334575392392 1.94472677714654 0.0518078709728915 1 FALSE Actinomyces sp._HMT_448 (SP153) -0.172272437908601 0.694923715721378 -0.247901221402079 0.804210834858544 1 FALSE Streptococcus gordonii (SP155) -0.990938021161989 0.682672782916887 -1.4515563619337 0.146624999893287 1 FALSE Selenomonas sp._HMT_138 (SP159) -0.352927000161523 0.321461213845599 -1.09788361693625 0.272255312706761 1 FALSE Selenomonas noxia (SP161) -0.49617358026387 0.477750704057967 -1.03856169347197 0.299008629058452 1 FALSE Mogibacterium timidum (SP165) 0.324925192020872 0.409682261161434 0.793115110963605 0.427710759607326 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP166) 0.252566290394548 0.367490275466198 0.68727339811684 0.491910459071632 1 FALSE Leptotrichia hongkongensis (SP167) 0.587957290842932 0.440491315227319 1.33477612501738 0.181949629795203 1 FALSE Prevotella sp._HMT_314 (SP17) -0.562392992621039 0.408133262516026 -1.37796412170389 0.168214365730003 1 FALSE Capnocytophaga ochracea (SP172) -1.19143602105506 0.431126829823879 -2.76353949379996 0.00571781723435691 0.85195476791918 FALSE Actinomyces oris (SP173) 0.114061544379432 0.611071456174995 0.186658275765981 0.851928572163679 1 FALSE Actinomyces naeslundii (SP179) 0.409955088607567 0.451695509032235 0.907591686014106 0.364093988510343 1 FALSE Treponema sp._HMT_237 (SP18) 0.130377723751619 0.427664309239918 0.304859958932129 0.760472813068082 1 FALSE Streptococcus anginosus (SP180) -0.553123093999404 0.580712214403639 -0.952490890117461 0.340848083858977 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP183) -0.42711055845156 0.493791236030331 -0.864961804274154 0.387059753407638 1 FALSE Oribacterium sp._HMT_078 (SP186) 0.259475523025795 0.509244437106995 0.50953040253099 0.610380493541256 1 FALSE Actinomyces sp._HMT_171 (SP189) -0.258119973827811 0.554962923464415 -0.465112105537554 0.641851177374232 1 FALSE Catonella morbi (SP19) 0.244396700250787 0.451160303743226 0.541707012392392 0.588020358204463 1 FALSE Actinomyces sp._HMT_175 (SP190) -0.0221484183817604 0.579039543120229 -0.0382502691654024 0.969488141198512 1 FALSE Tannerella forsythia (SP193) 0.189091482692679 0.387642278188338 0.487798914959446 0.625692280039195 1 FALSE Alloprevotella rava (SP199) -0.0250307437435305 0.414275181420898 -0.0604205727644099 0.951820673892557 1 FALSE Granulicatella adiacens (SP2) -0.495922104352438 0.597132999454023 -0.830505272369597 0.406253168140993 1 FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP200) -0.196618341562911 0.34534581717371 -0.56933755031992 0.569127088484101 1 FALSE Peptostreptococcus stomatis (SP208) -0.293708144306376 0.420093096290119 -0.699150133387433 0.484458210671626 1 FALSE Tannerella sp._HMT_286 (SP212) 0.0456174121894609 0.32290699840396 0.1412710545604 0.887655815372959 1 FALSE Capnocytophaga sputigena (SP216) 0.398862448986921 0.377323699653667 1.05708294854795 0.290473732518085 1 FALSE Actinomyces sp._HMT_169 (SP22) -0.155493659728299 0.72293373627351 -0.215087015484737 0.8296994771425 1 FALSE Streptococcus constellatus (SP222) -0.0868747719695341 0.409631293456339 -0.212080408302091 0.832044303961643 1 FALSE Prevotella melaninogenica (SP223) 0.0776116119492394 0.436757260979479 0.177699648942725 0.858958860963614 1 FALSE Lachnoanaerobaculum orale (SP224) -0.311531779936681 0.373838043010656 -0.833333540449227 0.404656645150436 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP229) 0.269683527449262 0.35756088456725 0.754231066901111 0.450710486026931 1 FALSE Kingella oralis (SP232) 0.161530284444528 0.522530007668222 0.309131116058489 0.757221790415543 1 FALSE Arachnia propionica (SP235) -0.945875072207365 0.474639301583905 -1.99282922642713 0.0462801502496772 1 FALSE Scardovia wiggsiae (SP236) 0.00544031483443988 0.588108809100518 0.00925052430818127 0.992619254739756 1 FALSE Porphyromonas catoniae (SP24) -0.241859583159503 0.378200901659056 -0.639500281724702 0.522497530437051 1 FALSE Dialister invisus (SP25) -0.923592335434897 0.542609379567541 -1.70213116509523 0.0887307828905589 1 FALSE Peptidiphaga sp._HMT_183 (SP251) -0.62297767830005 0.512359809017707 -1.21589880262938 0.224023474278953 1 FALSE Actinomyces massiliensis (SP253) 0.494953146702972 0.304392970075838 1.62603343493661 0.103942542924431 1 FALSE Cardiobacterium hominis (SP257) -0.0379278594256462 0.405945512029082 -0.0934309120356255 0.92556123366424 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP26) -0.454800275229084 0.555652414980776 -0.818497792805991 0.413073001843314 1 FALSE Fretibacterium sp._HMT_360 (SP260) -0.0265069733759011 0.36073469592125 -0.0734805209357731 0.94142374420774 1 FALSE Alloprevotella sp._HMT_912 (SP269) 0.18051144994008 0.327706001698658 0.550833518472051 0.581747804590483 1 FALSE Mycoplasma faucium (SP271) 0.361872622554859 0.307014826409311 1.17868126040405 0.238525120397871 1 FALSE Peptidiphaga gingivicola (SP286) 0.358626943803586 0.407384551214907 0.880315521867692 0.378688406271252 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP292) 0.163552288392811 0.547946516143746 0.298482212358669 0.765335150221734 1 FALSE Neisseria elongata (SP295) 0.373257168194421 0.35459754472127 1.05262197595818 0.292514281119507 1 FALSE Mogibacterium neglectum (SP298) -0.354642088597671 0.386960105179358 -0.916482303604121 0.359413984949543 1 FALSE Stomatobaculum longum (SP3) -0.817316636918541 0.526244994410238 -1.55311052000505 0.120396733267107 1 FALSE Tannerella sp._HMT_808 (SP30) -0.0938425555533868 0.342017253747574 -0.274379594962327 0.783792922375784 1 FALSE Porphyromonas pasteri (SP31) 0.220632689464706 0.398008236735663 0.554342018834247 0.57934479879389 1 FALSE Neisseria sicca (SP318) 0.0889668419676146 0.40032814731187 0.222234790546232 0.824131112258706 1 FALSE Prevotella oris (SP32) -0.269244308922786 0.588012468797913 -0.457888774830249 0.647032351892517 1 FALSE Megasphaera micronuciformis (SP320) 0.195933668567715 0.383812494989121 0.510493199480827 0.609705977715655 1 FALSE Shuttleworthia satelles (SP326) -0.211369369309773 0.374010729533067 -0.565142528327079 0.571976823751866 1 FALSE Actinomyces dentalis (SP346) -0.137764671887119 0.564155775488486 -0.244196156226235 0.807078903859287 1 FALSE Cryptobacterium curtum (SP349) 0.102708676268434 0.337959024629136 0.30390866579504 0.761197475521017 1 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP351) 0.247302106277792 0.34870292641912 0.70920570933365 0.478196831022349 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_132 (SP352) -0.398235628913645 0.346881239905691 -1.14804602584422 0.250949563940534 1 FALSE Gemella haemolysans (SP354) -0.784892313053263 0.453976810140971 -1.72892600573482 0.0838223390138952 1 FALSE Alloprevotella tannerae (SP36) -0.78058288059199 0.543665805401901 -1.43577703956376 0.151065795253451 1 FALSE Streptococcus parasanguinis_clade_411 (SP37) -0.711840529830524 0.726483818834559 -0.97984361299674 0.327163320164054 1 FALSE Solobacterium moorei (SP371) -0.609895513934354 0.380163127675987 -1.60429949548965 0.108648052267824 1 FALSE Streptococcus mutans (SP4) -0.564974548030948 0.666878316667114 -0.847192859492786 0.396887632894013 1 FALSE Prevotella oralis (SP405) -0.514182493175691 0.395990268540505 -1.29847254850682 0.194125003503042 1 FALSE Rothia mucilaginosa (SP41) -0.392747092415975 0.519434294489519 -0.756105433511957 0.449585984515853 1 FALSE Lancefieldella rimae (SP42) 0.0551702277710389 0.56539868799267 0.0975775659595343 0.922267739249561 1 FALSE Fusobacterium nucleatum (SP43) 1.03530469290222 0.418426903680329 2.47427850311742 0.0133505577168415 1 FALSE Campylobacter concisus (SP44) -0.337776166929348 0.42779556852741 -0.789573786591727 0.429776722082023 1 FALSE Capnocytophaga sp._HMT_380 (SP45) -0.03226791999592 0.330138861454646 -0.0977404473188712 0.922138396987589 1 FALSE Campylobacter showae (SP46) 0.252526659493033 0.419385989502884 0.602134229119965 0.54708479157797 1 FALSE Peptococcus sp._HMT_167 (SP47) 0.37324322541765 0.413858694672596 0.901861505441906 0.367130442355652 1 FALSE Eikenella corrodens (SP48) 0.214134724373423 0.38900850857719 0.550462829609117 0.582001964848197 1 FALSE Actinomyces sp._HMT_170 (SP49) -0.206767490091499 0.471500553277917 -0.438530747533659 0.661001586116843 1 FALSE Schaalia meyeri (SP51) 0.0977193808126195 0.37938296907488 0.257574505916559 0.796735307281015 1 FALSE Veillonella parvula (SP52) -1.38316057547168 0.600228930789337 -2.3043883833669 0.0212008515169559 1 FALSE Streptococcus mitis (SP57) -1.61936794992038 0.607992435397805 -2.66346726643209 0.00773399360699019 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP58) 0.041132515772764 0.488951700024683 0.0841238833420306 0.932957935785961 1 FALSE Prevotella denticola (SP59) 0.491978501762976 0.584704846942518 0.841413414538262 0.400116373008048 1 FALSE Corynebacterium matruchotii (SP6) -0.280224086344073 0.594897325220312 -0.471046135970262 0.637607788892218 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP60) 0.262910312227604 0.373899621893204 0.703157470169089 0.481957620289697 1 FALSE Rothia aeria (SP61) 0.207657382181117 0.427318649859777 0.485954409547204 0.626999490267113 1 FALSE Leptotrichia sp._HMT_215 (SP62) 0.106639846870405 0.341336309660224 0.312418702178381 0.75472233890564 1 FALSE Haemophilus parainfluenzae (SP63) 0.779512829629602 0.665902892692145 1.17061036704338 0.241755428311246 1 FALSE Fretibacterium fastidiosum (SP65) 0.273988645412982 0.412764614651557 0.663789083868721 0.506825313308016 1 FALSE Rothia dentocariosa (SP66) -0.0836696053121708 0.709543931062982 -0.117920260676212 0.90613083955238 1 FALSE Lachnoanaerobaculum saburreum (SP67) -0.151946527270657 0.501585959355682 -0.3029321782967 0.7619415481002 1 FALSE Aggregatibacter sp._HMT_458 (SP68) -0.0221467985417951 0.326715963627877 -0.0677860925308807 0.945955914848876 1 FALSE Prevotella sp._HMT_300 (SP69) 0.119720530318328 0.458438759851019 0.261148360049736 0.793978099271171 1 FALSE Streptococcus sanguinis (SP7) -0.635008954718815 0.647840205816993 -0.980193802448559 0.326990463172822 1 FALSE Bergeyella sp._HMT_322 (SP70) 0.354141038399799 0.419231828956984 0.844737956277972 0.398257162293842 1 FALSE Treponema socranskii (SP72) 0.0836714486004792 0.514870567049427 0.162509675159674 0.870904509875124 1 FALSE Prevotella intermedia (SP73) 0.522698574845052 0.427063950616704 1.22393513685771 0.220976697335598 1 FALSE Gemella morbillorum (SP77) -0.32415847940698 0.508251866379938 -0.637791026161544 0.523609721913623 1 FALSE Anaeroglobus geminatus (SP79) 0.308883070141445 0.41874467283722 0.737640596233969 0.460732879152997 1 FALSE Veillonella atypica (SP80) 0.0438672612868189 0.404498688576457 0.108448463556705 0.913639959434791 1 FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP81) -0.511371758017594 0.4081408358857 -1.25292965823396 0.210231307249638 1 FALSE Capnocytophaga gingivalis (SP82) 0.671070147890286 0.471267900844061 1.42396744333398 0.154455896694433 1 FALSE Treponema denticola (SP84) -0.0281714260419562 0.427661417628731 -0.0658731998742352 0.947478777628436 1 FALSE Leptotrichia wadei (SP85) -0.269800170950356 0.583275963690039 -0.46256007061133 0.643679735098465 1 FALSE Porphyromonas gingivalis (SP86) -0.00669047901176896 0.390279512131725 -0.0171427881910204 0.986322703879544 1 FALSE Streptococcus salivarius (SP87) -0.771945641211869 0.583418632477561 -1.32314190572506 0.185788191077921 1 FALSE Streptococcus sp._HMT_064 (SP9) -0.473183490228264 0.486972380951683 -0.971684450160248 0.331207554968963 1 FALSE Treponema sp._HMT_262 (SP91) 0.222480893411369 0.334524856007849 0.665065358868725 0.506008690098082 1 FALSE Capnocytophaga leadbetteri (SP92) 0.402284838839442 0.465278844810867 0.864610208106428 0.38725276774906 1 FALSE Parvimonas micra (SP93) 0.25259843146613 0.579171915472213 0.436137224057523 0.662737171034346 1 FALSE Bifidobacterium dentium (SP95) -0.382688126283477 0.477819765565882 -0.800904763389726 0.423186782282467 1 FALSE Corynebacterium durum (SP96) 0.0566104299962964 0.406123697793861 0.139392087444822 0.889140324624794 1 FALSE Lancefieldella parvula (SP97) -1.25189102004339 0.561533643299235 -2.22941409652327 0.0257863651636981 1 FALSE Actinomyces naeslundii_nov_97.422% (SPN109) 0.396904074335572 0.445324514555036 0.891269313417776 0.37278470715296 1 FALSE Actinomyces sp._HMT_175_nov_97.633% (SPN133) -0.283126500752941 0.467183834762157 -0.606028033690594 0.544496137815178 1 FALSE Streptococcus sanguinis_nov_97.727% (SPN14) -0.655372917795543 0.559331240519744 -1.17170805118369 0.241314289481784 1 FALSE Actinomyces viscosus_nov_95.849% (SPN249) 0.728191872214983 0.369592221052336 1.97025757236343 0.0488088583042326 1 FALSE Actinomyces viscosus_nov_95.841% (SPN468) -0.143794555337129 0.386825870664553 -0.371729416882317 0.710094320518978 1 FALSE Prevotella veroralis_nov_96.402% (SPN608) -0.16051941879249 0.357779538197657 -0.448654553027598 0.653680873848647 1 FALSE Veillonella dispar_parvula (SPP13) -0.708746024827382 0.575583711577394 -1.23135177485314 0.218191325337719 1 FALSE