Comp11OSS 24 Weeks P1...1 Comp11OSS 24 Weeks P1...2 Comp11OSS 24 Weeks P1...3 Comp11OSS 24 Weeks P1...4 Comp11OSS 24 Weeks P1...5 Comp11OSS 24 Weeks P1...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus mutans (SP100) 0.615509733568573 1.79034789942478 0.343793367627783 0.731001688419346 1 FALSE GranulicatellaGranulicatella adiacens (SP107) -1.89723326314043 1.15259761745634 -1.64604996089391 0.0997534733607208 1 FALSE GranulicatellaGranulicatella paradiacens (SP108) -2.2821620696684 1.11101205949004 -2.05412898102648 0.0399632097613909 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) -1.80229615500302 1.18765822414117 -1.51752088131778 0.129135225525928 1 FALSE VeillonellaVeillonella sp._HMT_780 (SP113) -0.190050815164956 0.909524622693709 -0.208956206817237 0.834482425802293 1 FALSE ActinomycesActinomyces sp._HMT_896 (SP115) 0.317797898146093 1.33532245779235 0.23799337477743 0.811886232754772 1 FALSE HaemophilusHaemophilus haemolyticus (SP117) -0.28244279663427 0.904227763321416 -0.312358023156466 0.754768448149076 1 FALSE CatonellaCatonella morbi (SP118) 1.54348717429395 0.810344119074191 1.90473051875464 0 0 TRUE PrevotellaPrevotella oris (SP12) -0.481429874713009 0.798146728622618 -0.603184674506934 0.546385841764583 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.405176743863279 1.22121102764012 0.331782742452175 0.740053316381142 1 FALSE CampylobacterCampylobacter showae (SP122) 0.933780093518613 0.767488658791799 1.21666956615176 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_212 (SP125) -0.137481010594393 1.01849996151874 -0.134983815207404 0.892624670800736 1 FALSE CapnocytophagaCapnocytophaga sp._HMT_864 (SP127) 0.436712885812147 1.35272123955728 0.322840266746367 0.746816216009848 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 1.01879310019003 1.31737242496946 0.773352379995083 0.439313864163972 1 FALSE PeptococcusPeptococcus sp._Oral_Taxon_167 (SP133) -0.0793322100116131 0.821746424167113 -0.0965409859763258 0.923090923824984 1 FALSE PrevotellaPrevotella saccharolytica (SP137) -0.262290641856718 0.758844977652 -0.345644564543725 0.729609850176619 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) -0.307676071043498 0.898569891541495 -0.34240638812823 0.732045081702721 1 FALSE BergeyellaBergeyella sp._HMT_900 (SP14) -0.121515833154114 0.465687855543297 -0.260938376871234 0.794140029288592 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) -0.921708194435106 1.40447515487061 -0.656265218532841 0.51165349245976 1 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) -0.392416127057966 0.938515934148359 -0.418124096544038 0.675856387906942 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) 0.388736137112759 1.20027966781921 0.323871300610343 0.746035472677935 1 FALSE ActinomycesActinomyces viscosus (SP147) -0.0866554007676537 1.09564401604639 -0.079090835616798 0.936960372797773 1 FALSE StreptococcusStreptococcus cristatus (SP15) -0.788255121627958 1.02698539049761 -0.767542682614032 0.442758926021962 1 FALSE AggregatibacterAggregatibacter aphrophilus (SP150) 0.912577127274002 0.70520254194361 1.29406386533838 0 0 TRUE CardiobacteriumCardiobacterium valvarum (SP151) 1.14009248618555 0.848280617143847 1.34400393353821 0 0 TRUE PorphyromonasPorphyromonas endodontalis (SP155) -0.578268188452882 0.786031929470199 -0.73568027808062 0.461925294624102 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) -0.40796246228743 0.85773157404482 -0.475629526337236 0.634338336208056 1 FALSE PrevotellaPrevotella sp._HMT_306 (SP159) -0.182803296508333 0.86973729704213 -0.210182197693516 0.833525473416293 1 FALSE PrevotellaPrevotella marshii (SP16) -0.324019606572867 0.822389824443027 -0.393997587205451 0.693582820594318 1 FALSE ScardoviaScardovia wiggsiae (SP166) 1.19208232786844 0.951253356443177 1.25317016733139 0 0 TRUE StreptococcusStreptococcus sanguinis (SP17) 1.08692827105178 1.42026763249995 0.765298205901218 0.44409399213837 1 FALSE ActinomycesActinomyces odontolyticus (SP170) 0.0708366790110191 1.05111119994971 0.0673921836380472 0.946269491597159 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) 0.509819185319771 1.55941380763939 0.326930018717435 0.743720815907822 1 FALSE ActinomycesActinomyces naeslundii (SP172) 0.651117429644719 1.37373821444089 0.47397489769164 0.635517807864057 1 FALSE FusobacteriumFusobacterium periodonticum (SP173) -0.660138845919774 1.1606592555656 -0.568761971055909 0.569517685653775 1 FALSE PrevotellaPrevotella histicola (SP174) -0.168118751923289 1.11658836928917 -0.150564663350662 0.880319138107786 1 FALSE StreptococcusStreptococcus anginosus (SP175) -0.426130995119343 1.37169261486637 -0.310660705249082 0.756058572746184 1 FALSE KingellaKingella oralis (SP176) 1.78725953655626 1.0305525318792 1.73427310231067 0.0828696376247387 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) 0.891483641594713 1.52626268576854 0.584095811230432 0.559155852831636 1 FALSE GemellaGemella haemolysans (SP183) -1.42768229935227 1.15987021652503 -1.23089831863224 0.218360896544948 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) 0.453185706626492 1.2669161839334 0.357707725557255 0.720562051005355 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) -1.07440929268681 1.27456323887646 -0.842962718455545 0.399249294718537 1 FALSE LeptotrichiaLeptotrichia sp._HMT_221 (SP191) -0.0358786659366193 1.04139016760958 -0.0344526643832021 0.97251618826799 1 FALSE RothiaRothia dentocariosa (SP193) 0.502683738642195 1.30783993116777 0.384361821857931 0.700710293042584 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.821104635651839 0.804334766242738 1.02084936535497 0 0 TRUE EikenellaEikenella corrodens (SP200) 0.961685584235314 0.757765730592837 1.26910672442648 0 0 TRUE ActinomycesActinomyces sp._str._ChDCB197 (SP201) -1.17311276621075 1.81952062138994 -0.64473727443364 0.51909745664044 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) -0.745778299452527 1.4408412790186 -0.517599204237472 0.604737937112649 1 FALSE CampylobacterCampylobacter gracilis (SP205) 2.40490725571624 1.13534647092401 2.11821441058339 0.0341569132952784 1 FALSE SelenomonasSelenomonas sputigena (SP21) -0.121127784860848 1.25499229824816 -0.0965167555449787 0.923110167050407 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) 0.262487504998959 1.1815142550878 0.222161945036755 0.824187817320493 1 FALSE NeisseriaNeisseria sicca (SP215) -2.11010791032456 0.850478641585026 -2.48108277756626 0 0 TRUE TannerellaTannerella sp._HMT_286 (SP218) 1.20201974559096 0.916141416379606 1.31204607072682 0 0 TRUE StreptococcusStreptococcus australis (SP219) -0.302133594305493 1.24466785004037 -0.24274234631809 0.808205000733259 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 0.652085376337602 0.594707816470699 1.0964802517771 0.272868660956594 1 FALSE NeisseriaNeisseria flavescens|subflava (SP240) -1.6933059339648 1.39240769759504 -1.21609923364362 0.223947122451927 1 FALSE CardiobacteriumCardiobacterium hominis (SP242) 1.01362095078562 0.724185565374602 1.39967019400794 0 0 TRUE LautropiaLautropia mirabilis (SP245) -0.543657637631929 1.33624882012904 -0.406853596008736 0.684115519691712 1 FALSE ActinomycesActinomyces oris (SP249) 1.38832232909248 1.19247613811839 1.1642348930211 0.244328833268428 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) 0.608485578598827 1.10920959608239 0.548575833411406 0.583296574273184 1 FALSE ActinomycesActinomyces johnsonii (SP26) -0.332151300601106 1.04965829545274 -0.316437551191689 0.751670418407332 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) -2.1480980613008 1.36619908024712 -1.57231701613519 0.115877048663609 1 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 1.37746710212476 1.18973938285676 1.15778894266509 0.246950176826876 1 FALSE CapnocytophagaCapnocytophaga sp._HMT_338 (SP269) 0.871852834113199 0.679304726959065 1.28344879626568 0 0 TRUE AlloprevotellaAlloprevotella tannerae (SP27) -0.931401436039235 0.996500866573167 -0.934671978000581 0.34995737235659 1 FALSE DialisterDialister invisus (SP28) -0.856645174480759 0.936284539456166 -0.914941065862664 0.360222569934141 1 FALSE ActinomycesActinomyces dentalis (SP286) 0.492449017635308 1.52720585634987 0.32245097515033 0.747111072041924 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) -0.479834966210317 0.904135527410806 -0.530711327741353 0.595618835052204 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) -0.209120468082635 0.885022582227259 -0.236288284934334 0.81320897686442 1 FALSE ParvimonasParvimonas micra (SP31) -1.57859251803431 1.1293930025016 -1.39773534503733 0.162192556181963 1 FALSE RothiaRothia mucilaginosa (SP318) -0.888751829692041 1.75717416338027 -0.505784712872371 0.613007791352997 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) -0.235079556317507 0.771807247878509 -0.304583245316337 0.760683582355443 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) 0.521208775879704 1.00864743841587 0.516740295993107 0.605337462576729 1 FALSE GemellaGemella morbillorum (SP332) 0.160201278021004 0.978772305606373 0.163675736535838 0.869986419365059 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) -0.818204508796202 0.979167733180035 -0.835612205213223 0.403373100208952 1 FALSE CapnocytophagaCapnocytophaga sp._HMT_902 (SP349) -0.103315951159948 0.99608759345275 -0.103721752824792 0.917390163503845 1 FALSE PrevotellaPrevotella loescheii (SP36) -0.2127985264165 1.09367706820973 -0.194571626855847 0.845728316994632 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) 1.6486933718335 2.13347025284497 0.772775420531397 0.439655302384112 1 FALSE StreptococcusStreptococcus salivarius (SP374) -1.44662325963442 1.59369760963356 -0.907715021274989 0.364028805576247 1 FALSE ButyrivibrioButyrivibrio sp._HMT_080 (SP392) -0.462410990251772 0.739679591128283 -0.625150397277321 0.531872353704482 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) -0.284621476895496 0.881389890613168 -0.322923464322343 0.746753205564611 1 FALSE SchaaliaSchaalia odontolytica (SP404) -0.40695482066784 1.03215755692275 -0.394275871874762 0.693377374980914 1 FALSE RothiaRothia aeria (SP465) -0.811032387863854 1.12550500164418 -0.720594210313654 0.471159217043296 1 FALSE LeptotrichiaLeptotrichia wadei (SP49) 1.71932595404332 1.57078363525595 1.09456574123473 0.273706931286194 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) -0.899368451769168 1.77307373023322 -0.507236916566843 0.611988595261122 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) 1.91418506057896 1.22476305951391 1.56290234728231 0.118075565487049 1 FALSE StreptococcusStreptococcus mitis (SP52) -0.708025580798225 1.47508044070235 -0.47999116608251 0.631233674535807 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) 1.5762844831882 1.2338880908271 1.27749387882623 0.201427940110507 1 FALSE StreptococcusStreptococcus oralis_subsp._dentisani_clade_058 (SP563) -1.63925920673558 0.996843878457759 -1.64444928856033 0 0 TRUE StreptococcusStreptococcus oralis (SP58) 0.672071976065424 1.50005833568922 0.448030559929279 0.654131141604283 1 FALSE PrevotellaPrevotella denticola (SP60) -1.31559744822704 1.26996484728199 -1.03593217642419 0.300233785158505 1 FALSE GemellaGemella sanguinis (SP61) 0.0522620222748249 1.33896984583775 0.0390315154872859 0.968865262025777 1 FALSE TreponemaTreponema socranskii (SP63) -0.417288904562104 0.921327389167203 -0.452921414763644 0.650605330020492 1 FALSE StreptococcusStreptococcus gordonii (SP64) 0.230797465319681 1.54300451057131 0.149576662763109 0.881098621434135 1 FALSE CampylobacterCampylobacter concisus (SP67) -1.26368114925397 1.26328495927428 -1.00031361885281 0.317158758500303 1 FALSE CorynebacteriumCorynebacterium durum (SP68) -0.825361058022049 1.50164969309684 -0.549636217964998 0.582568912161153 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) -0.155115484696005 1.06223786604076 -0.146027071388596 0.883900017615138 1 FALSE PrevotellaPrevotella melaninogenica (SP79) -0.0256035990426536 1.05811164482555 -0.0241974456739627 0.980695115591924 1 FALSE SelenomonasSelenomonas noxia (SP8) -0.154936501756235 1.46627418424859 -0.105666800534741 0.915846722175779 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) 0.1970844166116 1.29384436680228 0.152324670314631 0.878930867863629 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) 0.116238047567804 1.35971234300792 0.0854872342415202 0.931874043918172 1 FALSE StreptococcusStreptococcus infantis (SP87) -1.64275269828595 1.46945699274278 -1.1179317982078 0.263596122988921 1 FALSE VeillonellaVeillonella parvula (SP88) 1.12980295366595 1.08343464029194 1.04279751786551 0.297042081179786 1 FALSE PrevotellaPrevotella oulorum (SP9) 0.551920693990209 1.2161561771223 0.453823862734617 0.649955606912604 1 FALSE StreptococcusStreptococcus intermedius (SP94) 1.12392794268641 1.20798746444553 0.930413581073293 0.352156989484239 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) -1.9822897948857 1.05481560013439 -1.87927614516996 0 0 TRUE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) 0.945087224369232 0.715124620294742 1.3215699719298 0 0 TRUE ActinomycesActinomyces sp._Oral_Taxon_171_nov_97.974% (SPN109) -0.0941319912722345 1.09526405580871 -0.0859445635716863 0.931510485935165 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) -0.440637036757218 1.46945136590087 -0.299865001988056 0.76428013090072 1 FALSE ActinomycesActinomyces israelii_nov_96.679% (SPN522) -0.550425841009021 0.895359769976355 -0.614753822392039 0.538717309352979 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) -0.18580638075878 1.10015905544151 -0.168890470736718 0.865882794775895 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) -0.00127210514024498 1.20919089998609 -0.00105203003120484 0.999160601635437 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 2.45203724891128 1.3198544606006 1.85780881309859 0.063196169160164 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) -1.19814179330852 1.11701777602197 -1.07262553831101 0.283439161589152 1 FALSE