GroupFeces Periodontitis...1 GroupFeces Periodontitis...2 GroupFeces Periodontitis...3 GroupFeces Periodontitis...4 GroupFeces Periodontitis...5 GroupFeces Periodontitis...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance RoseburiaRoseburia intestinalis (SP103) -0.661771090542005 1.20837764861429 -0.54765254165442 0.583930504770146 1 FALSE HaemophilusHaemophilus parainfluenzae (SP108) 0.679397849718979 0.860543494835891 0.789498559684706 0.429820671260687 1 FALSE BacteroidesBacteroides fragilis (SP119) 0.813104857214516 0.993785642739294 0.818189378318301 0.413249059256225 1 FALSE ButyrivibrioButyrivibrio crossotus (SP126) 2.90145635074169 0.755894636937419 3.8384401859196 0 0 TRUE HoldemanellaHoldemanella biformis (SP160) 1.04299063231824 0.955434653830488 1.09163994432977 0.274991391668412 1 FALSE BacteroidesBacteroides caccae (SP164) -0.245405406816077 1.14708648868643 -0.213938015342765 0.830595394511527 1 FALSE BlautiaBlautia obeum (SP175) -1.22297924438842 1.05335717229378 -1.16102996832999 0.245629712419865 1 FALSE FusicatenibacterFusicatenibacter saccharivorans (SP185) -1.77099997163477 0.842200876002772 -2.10282371117949 0.0354811825197462 1 FALSE AgathobaculumAgathobaculum butyriciproducens (SP193) -2.36730376278296 0.972875973143212 -2.43330478718121 0.0149617007615659 1 FALSE BarnesiellaBarnesiella intestinihominis (SP207) -1.81332210717601 0.844841850110748 -2.14634503124851 0.0318454613813204 1 FALSE OdoribacterOdoribacter splanchnicus (SP224) 0.00944548053357702 0.938838534023983 0.0100608147101637 0.991972766693306 1 FALSE MethanobrevibacterMethanobrevibacter smithii (SP225) 3.11993939582085 1.00937281396463 3.09096832474247 0.00199504915117759 0.239405898141311 FALSE ParabacteroidesParabacteroides distasonis (SP238) -3.10601718082148 0.771531286121194 -4.025782540118 5.67861500240576e-05 0.00698469645295908 TRUE RuminococcusRuminococcus callidus (SP24) 1.1038401968758 1.02473553383236 1.07719519859685 0.28139306986205 1 FALSE ParabacteroidesParabacteroides merdae (SP240) -0.0395777495831109 1.11006395540811 -0.035653575985683 0.971558587991641 1 FALSE AlistipesAlistipes putredinis (SP243) -2.52307477636864 0.920936411412518 -2.739684027151 0.00614982756269948 0.713379997273139 FALSE MediterraneibacterMediterraneibacter faecis (SP254) 0.892106394681042 0.958946404724137 0.930298492476936 0.352216558150656 1 FALSE LactobacillusLactobacillus rogosae (SP259) -0.0844167212704625 1.09912588736354 -0.0768035056229565 0.938779861894788 1 FALSE EubacteriumEubacterium rectale (SP26) -0.602550761063085 1.20969069288306 -0.498103163567395 0.618411330891175 1 FALSE RomboutsiaRomboutsia timonensis (SP263) 1.4059189085383 0.967292907821986 1.45345726942623 0.146096835562191 1 FALSE CoprococcusCoprococcus eutactus (SP266) 3.01452140102011 1.04385065571395 2.88788571863119 0.0038784075626593 0.457652092393797 FALSE PrevotellaPrevotella copri (SP27) 4.37136332577452 1.27853957286977 3.41902856863687 0.000628451278422244 0.0760426046890915 FALSE BilophilaBilophila wadsworthia (SP270) -0.837094466259614 0.915536513490322 -0.914321224686429 0.360548081129905 1 FALSE DoreaDorea formicigenerans (SP273) -0.246670325562976 1.07286572157009 -0.22991723997108 0.81815607960189 1 FALSE BlautiaBlautia luti (SP28) -1.301682924678 1.19956809727659 -1.08512632807862 0.277865707981374 1 FALSE AlistipesAlistipes shahii (SP288) 1.29339752765639 0.826819825026659 1.56430396140379 0.11774620226872 1 FALSE LachnospiraLachnospira eligens (SP29) -0.200587847602842 1.37091059509623 -0.146317234924252 0.883670960776861 1 FALSE LacnoclostridiumLacnoclostridium sp._SS3/4 (SP295) 0.286502206203145 1.18296374248614 0.242190183784523 0.808632800879443 1 FALSE CoprococcusCoprococcus comes (SP297) 2.15944003220381 0.810294515644886 2.66500635325809 0.0076986868306729 0.885348985527384 FALSE RuminococcusRuminococcus bromii (SP301) -0.87544523495942 1.23374227708434 -0.70958517935231 0.477961412873999 1 FALSE RoseburiaRoseburia inulinivorans (SP307) 0.643322873701833 1.09601881321299 0.586963349484783 0.55722832187264 1 FALSE CatenibacteriumCatenibacterium mitsuokai (SP309) 2.7283592628122 1.17030798006338 2.33131731927901 0.0197366336422514 1 FALSE PhascolarctobacteriumPhascolarctobacterium faecium (SP341) -0.606843577894535 0.848083676065027 -0.715546820462566 0.474271220599801 1 FALSE CoprococcusCoprococcus catus (SP350) -0.403436563630283 1.03621323207536 -0.389337398078067 0.697026574752831 1 FALSE EubacteriumEubacterium ramulus (SP363) -0.991222855967774 1.12029690197909 -0.884785858299437 0.376272138097137 1 FALSE BifidobacteriumBifidobacterium bifidum (SP368) 0.966835151312663 1.056374720225 0.915238818955017 0.360066269746284 1 FALSE PrevotellaPrevotella stercorea (SP38) 1.64154049161805 1.16373824483626 1.41057535824908 0.158369861747226 1 FALSE EubacteriumEubacterium ventriosum (SP386) -1.16693740766665 1.02352279982334 -1.14011862546498 0.254236883250347 1 FALSE LacnoclostridiumLacnoclostridium sp._str._L2_50 (SP388) -0.594070968005405 1.09518740851215 -0.542437726537116 0.587516996129967 1 FALSE MassiliprevotellaMassiliprevotella massiliensis (SP40) 1.22096665654798 0.9122390582724 1.33842839272882 0.180756828523337 1 FALSE AlistipesAlistipes finegoldii (SP400) -0.567411054206339 1.07430235616668 -0.528167001542259 0.59738343039908 1 FALSE AkkermansiaAkkermansia muciniphila (SP403) 0.758444435392935 1.19619293394853 0.634048583525213 0.526049116309864 1 FALSE EubacteriumEubacterium siraeum (SP407) 1.18894779910727 0.927028625657111 1.28253623049073 0.199654603918018 1 FALSE PhocaeicolaPhocaeicola vulgatus (SP41) -1.81377699611634 1.19090721904373 -1.52302124557844 0.127753390193868 1 FALSE DuodenibacillusDuodenibacillus massiliensis (SP419) 2.20186371558808 0.902827947422111 2.43885196717179 0.0147340025743112 1 FALSE EubacteriumEubacterium hallii (SP439) -0.233707638930884 1.12994380434867 -0.206831205261221 0.836141684782851 1 FALSE FaecalibacteriumFaecalibacterium prausnitzii (SP53) 0.0623305701229813 0.304930047880114 0.204409406538666 0.838033580017084 1 FALSE DoreaDorea longicatena (SP77) 0.141580088097635 0.923002806947918 0.153390744894694 0.878090143021928 1 FALSE SubdoligranulumSubdoligranulum variabile (SP78) -1.16965385412511 0.890882048390789 -1.31291662710891 0.189211043467374 1 FALSE CollinsellaCollinsella aerofaciens (SP79) 1.95140368107768 1.13503004818801 1.71925288162454 0.0855683355303701 1 FALSE BlautiaBlautia faecis (SP86) -1.30828296637912 1.14402232924548 -1.14358167050985 0.252797166789874 1 FALSE BifidobacteriumBifidobacterium longum (SP93) 0.295684844715015 1.31131332556118 0.225487561936028 0.821600000380446 1 FALSE StreptococcusStreptococcus thermophilus (SP98) -1.03047063604468 0.990408302025859 -1.04045032128353 0.298130733082343 1 FALSE AcetanaerobacteriumAcetanaerobacterium elongatum_nov_92.081% (SPN109) 1.55628308132341 0.864646014168161 1.79990777245489 0.0718752021932489 1 FALSE OscillibacterOscillibacter ruminantium_nov_94.144% (SPN119) 0.469746205508224 1.2268968413646 0.382873432933249 0.70181361060086 1 FALSE OscillibacterOscillibacter valericigenes_nov_94.344% (SPN120) 0.819769780110919 0.976757467033749 0.839276696394679 0.401314057088926 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_93.946% (SPN129) 1.0681972879353 1.07277801014255 0.995730037189478 0.319381331590534 1 FALSE PrevotellaPrevotella stercorea_nov_97.403% (SPN140) 1.49419690628894 1.03695692321914 1.44094404775305 0.149600490646278 1 FALSE RuminococcusRuminococcus callidus_nov_94.369% (SPN144) 0.303707221034218 1.24832054762385 0.243292655570173 0.807778693505047 1 FALSE EubacteriumEubacterium coprostanoligenes_nov_97.059% (SPN149) 1.08783470869977 1.1246103349305 0.967299227929465 0.333394469565737 1 FALSE KineothrixKineothrix alysoides_nov_96.825% (SPN170) -0.975303606456111 1.1060632390094 -0.881779243770549 0.377896198177922 1 FALSE FaecalibacteriumFaecalibacterium prausnitzii_nov_97.964% (SPN182) 0.515417611809727 1.05675981575543 0.487733924137982 0.625738319398094 1 FALSE Clostridiales_[F-1][G-2]Clostridiales_[F-1][G-2] bacterium_HMT_402_nov_89.038% (SPN193) 1.63668296671658 0.864976134976226 1.89217124095749 0.0584681688139819 1 FALSE OscillibacterOscillibacter ruminantium_nov_93.919% (SPN194) -0.560770365140931 1.03508996390815 -0.541760025402673 0.587983832786348 1 FALSE AlloprevotellaAlloprevotella rava_nov_92.857% (SPN2) 1.88001446397562 1.06191146536911 1.77040603222241 0.0766595255923403 1 FALSE LachnospiraLachnospira pectinoschiza_nov_96.372% (SPN205) -1.63701108407365 1.00858408197229 -1.62307844564875 0.104572636629743 1 FALSE PrevotellaPrevotella copri_nov_97.397% (SPN216) 1.54560064567019 0.932150931491949 1.65810127250143 0.0972970271105047 1 FALSE LachnospiraLachnospira eligens_nov_94.785% (SPN226) 0.0306863389095338 1.15177261039416 0.0266427058888233 0.97874471096339 1 FALSE unclassified_Ruminococcaceaeunclassified_Ruminococcaceae sp._str._D16_nov_93.243% (SPN23) 0.253967594563858 1.02649190851493 0.247413148079545 0.80458849973914 1 FALSE EubacteriumEubacterium ruminantium_nov_97.279% (SPN236) 1.3418574587615 0.925484353486156 1.44989750902533 0.147087102092379 1 FALSE ButyrivibrioButyrivibrio sp._HMT_090_nov_92.795% (SPN246) 2.0208988105199 0.992967305042794 2.03521183452541 0.0418295627760831 1 FALSE SporobacterSporobacter termitidis_nov_90.562% (SPN249) 0.910494615093815 0.998058061742342 0.912266179689321 0.361628613299118 1 FALSE ParaprevotellaParaprevotella clara_nov_97.609% (SPN255) -0.525323631844983 0.941340221909216 -0.558059264459695 0.576803915831513 1 FALSE ChristensenellaChristensenella massiliensis_nov_90.766% (SPN289) 1.93969928692996 0.762123890581466 2.54512332036994 0 0 TRUE AcutalibacterAcutalibacter muris_nov_96.599% (SPN301) 2.09678311941636 0.800259708111754 2.62012831354937 0.00878966878339278 0.984442903739991 FALSE EubacteriumEubacterium coprostanoligenes_nov_92.777% (SPN334) 2.1957814778036 1.11019191087752 1.97783955754821 0.0479468093506253 1 FALSE KineothrixKineothrix alysoides_nov_96.614% (SPN335) 2.33174906861879 0.769837935306675 3.02888304366283 0 0 TRUE AsteroleplasmaAsteroleplasma anaerobium_nov_80.300% (SPN346) 1.85556950293096 0.977831301154439 1.89763766075013 0.0577438297535894 1 FALSE SuccinivibrioSuccinivibrio dextrinosolvens_nov_97.079% (SPN35) 2.6454363763831 0.944639183612513 2.80047283902236 0 0 TRUE EubacteriumEubacterium coprostanoligenes_nov_95.711% (SPN358) 0.348786813665572 1.20172912697706 0.290237463531355 0.771634577337501 1 FALSE PrevotellaPrevotella oralis_nov_92.641% (SPN366) 1.62763304394462 0.928174470576188 1.75358523159361 0.0795016034035917 1 FALSE DialisterDialister succinatiphilus_nov_96.567% (SPN377) -1.7376363841476 0.996229942051628 -1.74421216508423 0 0 TRUE DuncaniellaDuncaniella freteri_nov_87.069% (SPN39) 1.59513387877744 1.12933491028595 1.41245423678043 0.157816256361129 1 FALSE PrevotellaPrevotella copri_nov_96.537% (SPN390) 0.867621394943471 0.884565550947768 0.980844657599268 0.326669352197419 1 FALSE OscillibacterOscillibacter ruminantium_nov_93.049% (SPN399) 1.4187232475103 0.816584783238881 1.73738633958266 0.0823190008187505 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_91.422% (SPN409) 2.40032953553057 0.973426478772031 2.46585601262723 0.0136686267492508 1 FALSE DialisterDialister succinatiphilus_nov_96.360% (SPN436) 4.43996561371403 0.865453130952714 5.13022075363735 2.89402584758616e-07 3.58859205100683e-05 TRUE OscillibacterOscillibacter ruminantium_nov_95.701% (SPN444) -2.24607911747437 0.870814203424665 -2.57928626869105 0 0 TRUE PrevotellaPrevotella copri_nov_96.963% (SPN455) 1.11560582326153 0.915663418163525 1.21835796989577 0.223087969666328 1 FALSE FusicatenibacterFusicatenibacter saccharivorans_nov_97.279% (SPN462) -0.90790545585587 1.11344026608323 -0.815405624811493 0.414840165714518 1 FALSE LacrimisporaLacrimispora xylanolytica_nov_97.285% (SPN536) 0.69716199809925 1.0658987846572 0.654060224229884 0.513073006178238 1 FALSE Clostridiales_[F-1][G-2]Clostridiales_[F-1][G-2] bacterium_HMT_402_nov_91.011% (SPN55) 0.954374932880292 0.952426489878539 1.00204576733476 0.316321488940992 1 FALSE MonoglobusMonoglobus pectinilyticus_nov_90.112% (SPN567) -1.69906818814606 1.08925432163704 -1.55984525780218 0.118796453442545 1 FALSE ErysipelatoclostridiumErysipelatoclostridium [Clostridium] spiroforme_nov_93.333% (SPN610) -2.02722074003844 1.1519981630788 -1.75974303172546 0.0784513860990461 1 FALSE LachnoclostridiumLachnoclostridium pacaense_nov_96.145% (SPN621) -1.30634024804572 1.12215201177558 -1.16413840044603 0.244367928849181 1 FALSE SporobacterSporobacter termitidis_nov_92.584% (SPN635) 1.56977888195353 0.989761819583765 1.58601680817885 0.112735496762292 1 FALSE RuminoclostridiumRuminoclostridium methylpentosum_nov_89.462% (SPN64) 1.74901189102222 1.08928805281529 1.60564681353281 0.108351533470456 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_92.809% (SPN75) 1.55414703047408 0.990430539148859 1.56916307509022 0.116609945672142 1 FALSE AgathobaculumAgathobaculum desmolans_nov_97.738% (SPN87) 2.66066090700986 1.01021018797781 2.63376962405799 0.00844427610710872 0.954203200103285 FALSE OscillibacterOscillibacter ruminantium_nov_92.601% (SPN96) 1.24157102934195 1.07651332975861 1.15332620137676 0.248776519614163 1 FALSE HoldemanellaHoldemanella biformis_nov_97.854% (SPN98) 1.3783487863298 1.13945692711958 1.20965413744433 0.226411635146152 1 FALSE BacteroidesBacteroides sp._str._4136_uniformis (SPP1) -2.17963905027467 1.07353619390162 -2.03033587750131 0.0423224097125335 1 FALSE Anaerostipes_Lacnoclostridium_unclassified_LachnospiraceaeAnaerostipes_Lacnoclostridium_unclassified_Lachnospiraceae hadrus_sp._SSC/2_sp._str._cont1.81 (SPP104) -0.0654651709438057 1.15153515610585 -0.0568503450343534 0.954664409217501 1 FALSE Lactobacillus_LigilactobacillusLactobacillus_Ligilactobacillus ruminis (SPP105) 1.77783447168622 1.0687350363197 1.66349414145565 0.0962135626042316 1 FALSE Blautia_MediterraneibacterBlautia_Mediterraneibacter [Ruminococcus] lactaris_lactaris (SPP117) -0.51854486741262 0.93760591930111 -0.553052041095413 0.580227775340544 1 FALSE RoseburiaRoseburia faecalis_faecis (SPP12) -0.389004015954727 1.20272700382338 -0.323435006213473 0.746365821851265 1 FALSE Blautia_MediterraneibacterBlautia_Mediterraneibacter [Ruminococcus] gnavus_gnavus (SPP137) -0.522703044987284 1.10339954493496 -0.473720555157646 0.635699193387323 1 FALSE Blautia_unclassified_LachnospiraceaeBlautia_unclassified_Lachnospiraceae sp._str._cont1.79_torques (SPP138) -1.13598192903451 1.17573164666395 -0.966191504887849 0.333948362947146 1 FALSE LacnoclostridiumLacnoclostridium sp._SM4/1_sp._str._M62/1 (SPP14) -1.78063455325025 1.19971629633672 -1.48421302493542 0.137752415439818 1 FALSE Bacteroides_PhocaeicolaBacteroides_Phocaeicola dorei_sp._Oral_Taxon_D25_sp._str._219_sp._str._3133FAA (SPP15) -0.507854420907448 1.0962886935691 -0.463248799231949 0.643186041196725 1 FALSE BifidobacteriumBifidobacterium adolescentis_faecale (SPP19) 1.71810534720395 1.27575870502083 1.34673221545911 0.178066492785978 1 FALSE Escherichia_ShigellaEscherichia_Shigella coli_dysenteriae_fergusonii_flexneri_sonnei (SPP26) 2.5607506431138 0.969015579546295 2.64263103418087 0.00822646268236656 0.937816745789788 FALSE BlautiaBlautia obeum_wexlerae (SPP29) 1.1559867866689 1.11155032039935 1.03997701719305 0.298350578464003 1 FALSE Parasutterella_SutterellaParasutterella_Sutterella excrementihominis_sp._str._cont1.66 (SPP54) -1.27393466396683 1.03852511607561 -1.22667679793897 0.219944091630675 1 FALSE BifidobacteriumBifidobacterium catenulatum_pseudocatenulatum (SPP67) 0.0935646319768004 1.02119878558986 0.0916223494358703 0.926998093854444 1 FALSE BacteroidesBacteroides koreensis_kribbi (SPP68) -0.938244411535976 0.979323212433426 -0.958053888260877 0.338035585839999 1 FALSE Bacteroides_PhocaeicolaBacteroides_Phocaeicola plebeius (SPP74) -0.872028048447885 1.04900697125466 -0.831289088007584 0.405810337492133 1 FALSE RuminococcusRuminococcus multispecies_sppn1_2_nov_95.023% (SPPN1) -1.31820528229594 1.1382832674609 -1.15806435882729 0.246837773351691 1 FALSE RoseburiaRoseburia multispecies_sppn106_3_nov_96.833% (SPPN106) -0.623952346417247 1.17398014665607 -0.531484581059137 0.595083023341615 1 FALSE ChristensenellaChristensenella multispecies_sppn2_2_nov_91.216% (SPPN2) 2.13436846911086 0.851096187346261 2.50778760478986 0.0121489668418571 1 FALSE ClostridiumClostridium multispecies_sppn27_2_nov_97.959% (SPPN27) 2.03871200121309 1.06280163784929 1.91824318725993 0.0550801824755059 1 FALSE multigenusmultigenus multispecies_sppn46_2_nov_92.568% (SPPN46) 1.02697303023798 0.83485539238687 1.2301208563819 0.218651851024737 1 FALSE RoseburiaRoseburia multispecies_sppn52_2_nov_97.072% (SPPN52) -0.136097656974674 0.8582046371093 -0.158584154745531 0.873996513484089 1 FALSE LacnoclostridiumLacnoclostridium multispecies_sppn68_2_nov_97.279% (SPPN68) -0.601806322830234 0.866041464145771 -0.694893198241764 0.487122235599127 1 FALSE