GroupFeces Parkinson + Periodontitis...1 GroupFeces Parkinson + Periodontitis...2 GroupFeces Parkinson + Periodontitis...3 GroupFeces Parkinson + Periodontitis...4 GroupFeces Parkinson + Periodontitis...5 GroupFeces Parkinson + Periodontitis...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance RoseburiaRoseburia intestinalis (SP103) -1.03505723534265 1.29793503798302 -0.797464591872883 0.42518125901085 1 FALSE HaemophilusHaemophilus parainfluenzae (SP108) -0.628176986702816 0.619238455109703 -1.01443471657704 0 0 TRUE BacteroidesBacteroides fragilis (SP119) -0.136742743455936 1.0132211650378 -0.134958435704247 0.892644737103542 1 FALSE ButyrivibrioButyrivibrio crossotus (SP126) 3.98622020837481 1.00092458479725 3.98253801427235 0 0 TRUE HoldemanellaHoldemanella biformis (SP160) -0.217937043076144 0.973860116795819 -0.223786803995216 0.822923198468263 1 FALSE BacteroidesBacteroides caccae (SP164) -0.273135524402896 1.30438126762332 -0.209398533375575 0.834137137584372 1 FALSE BlautiaBlautia obeum (SP175) -1.64104329124453 1.15682776617935 -1.41857183862762 0.1560238809289 1 FALSE FusicatenibacterFusicatenibacter saccharivorans (SP185) -2.03668311820164 0.974923874720703 -2.08906887092607 0.0367015240318087 1 FALSE AgathobaculumAgathobaculum butyriciproducens (SP193) -1.16422923264448 1.30669720591164 -0.89097093601898 0.372944762589311 1 FALSE BarnesiellaBarnesiella intestinihominis (SP207) -1.08293980333244 1.10847589991728 -0.976962876155678 0.328587531606881 1 FALSE MegasphaeraMegasphaera elsdenii (SP208) 1.03628860938099 1.22193234255242 0.848073639835368 0.396396960912348 1 FALSE OdoribacterOdoribacter splanchnicus (SP224) -0.707624250736119 1.02239367416472 -0.692125028369565 0.488858815218086 1 FALSE MethanobrevibacterMethanobrevibacter smithii (SP225) 1.32758210068376 1.18194219542883 1.12322083585661 0.261343715555495 1 FALSE ParabacteroidesParabacteroides distasonis (SP238) -2.75117885186424 1.06409477785888 -2.58546410442875 0.0097247998235327 1 FALSE RuminococcusRuminococcus callidus (SP24) 1.96067365213976 1.3414168891193 1.46164377982973 0.143838850730064 1 FALSE ParabacteroidesParabacteroides merdae (SP240) 0.471322919484449 1.16156336103335 0.405766000629661 0.684914542302411 1 FALSE AlistipesAlistipes putredinis (SP243) -1.58176413376789 1.16692645211135 -1.35549599626092 0.175259583342802 1 FALSE MediterraneibacterMediterraneibacter faecis (SP254) 1.6098729945679 1.1803214297147 1.36392761669762 0.172590348009141 1 FALSE LactobacillusLactobacillus rogosae (SP259) -0.466568854050565 1.26351581037682 -0.369262379005309 0.711932164277863 1 FALSE EubacteriumEubacterium rectale (SP26) -0.195786081475662 1.33469886927604 -0.146689328943434 0.8833772417563 1 FALSE RomboutsiaRomboutsia timonensis (SP263) -1.23198188896463 0.957819366787971 -1.28623614397781 0.198360660438243 1 FALSE CoprococcusCoprococcus eutactus (SP266) 0.766056074121202 1.24827135809609 0.613693544398565 0.539417855094673 1 FALSE PrevotellaPrevotella copri (SP27) 5.17916028575666 1.04885954615353 4.93789688500253 7.89695765613517e-07 0.00010108105799853 TRUE BilophilaBilophila wadsworthia (SP270) -1.04309957973798 1.02457137227134 -1.01808386215747 0.308638103844214 1 FALSE DoreaDorea formicigenerans (SP273) -0.310731565410259 1.01904592842842 -0.304924004641744 0.760424032788314 1 FALSE BlautiaBlautia luti (SP28) -0.789794731324734 1.25291002251043 -0.630368276360533 0.528453661502246 1 FALSE AlistipesAlistipes shahii (SP288) 1.90522914994946 1.03983954743964 1.83223378514564 0.066916597369364 1 FALSE LachnospiraLachnospira eligens (SP29) 0.277468039381682 1.39053571965165 0.199540389693256 0.8418400521356 1 FALSE LacnoclostridiumLacnoclostridium sp._SS3/4 (SP295) 0.232316801508301 1.17293060249206 0.198065257240889 0.842994007009141 1 FALSE CoprococcusCoprococcus comes (SP297) 1.00512057543585 1.08274052103749 0.928311590733433 0.353245963399768 1 FALSE RuminococcusRuminococcus bromii (SP301) -1.53426902392604 1.15828212011812 -1.32460736229752 0.185301412761091 1 FALSE RoseburiaRoseburia inulinivorans (SP307) 0.804215252980709 1.23003977911172 0.653812394231249 0.513232680351109 1 FALSE CatenibacteriumCatenibacterium mitsuokai (SP309) 1.36134004117013 1.41597059273354 0.961418300744543 0.33634188619348 1 FALSE PhascolarctobacteriumPhascolarctobacterium faecium (SP341) -0.578506900351956 1.11705699319363 -0.517884856257889 0.604538608536779 1 FALSE CoprococcusCoprococcus catus (SP350) -0.358438872266479 1.03092325665505 -0.34768725019307 0.728075072851357 1 FALSE EubacteriumEubacterium ramulus (SP363) -1.30453168692503 1.13120528190525 -1.15322276848624 0.248818960433967 1 FALSE BifidobacteriumBifidobacterium bifidum (SP368) 0.403846031800767 1.00985007511584 0.399906918613086 0.689225076246404 1 FALSE PrevotellaPrevotella stercorea (SP38) 0.287192726576841 1.06461035382766 0.269763228907439 0.787342413421897 1 FALSE EubacteriumEubacterium ventriosum (SP386) -0.934761869285606 1.14160064220188 -0.818816874071363 0.412890902104601 1 FALSE LacnoclostridiumLacnoclostridium sp._str._L2_50 (SP388) -0.00820801447510708 1.27578978165254 -0.00643367315928427 0.994866706929986 1 FALSE MassiliprevotellaMassiliprevotella massiliensis (SP40) 2.49967819256588 1.15958479634621 2.15566658035034 0.0311097095351925 1 FALSE AlistipesAlistipes finegoldii (SP400) -0.356088290100176 1.06272118655208 -0.335072166252257 0.737570648536815 1 FALSE AkkermansiaAkkermansia muciniphila (SP403) 0.782895212535874 1.29284702198942 0.605559048533957 0.544807602778097 1 FALSE EubacteriumEubacterium siraeum (SP407) 2.31241352373667 1.02002936331079 2.26700682050084 0.0233898090689535 1 FALSE PhocaeicolaPhocaeicola vulgatus (SP41) -0.853011636265203 1.2001813754222 -0.710735605245607 0.477248091378995 1 FALSE DuodenibacillusDuodenibacillus massiliensis (SP419) 1.13927999035673 1.13651079628788 1.0024365752423 0.316132784663773 1 FALSE EubacteriumEubacterium hallii (SP439) -1.69114585968255 1.19081618747399 -1.42015692889587 0.155561999706852 1 FALSE FaecalibacteriumFaecalibacterium prausnitzii (SP53) 0.0221880513404488 0.28815326820244 0.077000866514069 0.938622855637482 1 FALSE DoreaDorea longicatena (SP77) 0.20971606324363 0.88902103213769 0.235895502651223 0.813513758149568 1 FALSE SubdoligranulumSubdoligranulum variabile (SP78) -0.713426521687114 0.837853467772784 -0.851493189595041 0.39449544488109 1 FALSE CollinsellaCollinsella aerofaciens (SP79) 2.33855227804896 0.929713189592198 2.51534807102685 0.011891491765165 1 FALSE BlautiaBlautia faecis (SP86) -0.595688517567973 1.20089565668555 -0.496036865694113 0.619868401157456 1 FALSE BifidobacteriumBifidobacterium longum (SP93) -1.31883570986068 1.11324102543826 -1.18468119636669 0.236143519815107 1 FALSE StreptococcusStreptococcus thermophilus (SP98) -0.84371378642266 1.06359522826595 -0.793265862802173 0.427622941465639 1 FALSE AcetanaerobacteriumAcetanaerobacterium elongatum_nov_92.081% (SPN109) 2.01187282170189 1.15790438438311 1.73751205093998 0.0822968287737807 1 FALSE OscillibacterOscillibacter ruminantium_nov_94.144% (SPN119) 3.09549129538523 0.909326075808964 3.40415982532051 0.000663679083539776 0.0836235645260117 FALSE OscillibacterOscillibacter valericigenes_nov_94.344% (SPN120) 2.28865546166468 1.00219370590408 2.28364581435889 0.0223923549478725 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_93.946% (SPN129) 1.08495632557846 1.1854559591319 0.915222802855502 0.360074676028967 1 FALSE PrevotellaPrevotella stercorea_nov_97.403% (SPN140) 0.509953661786532 1.13172474873829 0.450598665757782 0.652278828447934 1 FALSE RuminococcusRuminococcus callidus_nov_94.369% (SPN144) 0.886947273740404 1.31505749341716 0.674455130806244 0.500022002718983 1 FALSE EubacteriumEubacterium coprostanoligenes_nov_97.059% (SPN149) 1.51844628386235 1.21490267244217 1.24985014709862 0.211354293451521 1 FALSE KineothrixKineothrix alysoides_nov_96.825% (SPN170) -0.508482597432072 1.16201524136078 -0.437586857153968 0.661685800227828 1 FALSE FaecalibacteriumFaecalibacterium prausnitzii_nov_97.964% (SPN182) -0.585989765851565 1.08336201190682 -0.540899311043931 0.588576985809478 1 FALSE Clostridiales_[F-1][G-2]Clostridiales_[F-1][G-2] bacterium_HMT_402_nov_89.038% (SPN193) 1.40291981429497 1.09327085644426 1.28323169507857 0.19941091484462 1 FALSE OscillibacterOscillibacter ruminantium_nov_93.919% (SPN194) 0.292651680268252 1.2077445058329 0.24231257426953 0.808537971202174 1 FALSE AlloprevotellaAlloprevotella rava_nov_92.857% (SPN2) 2.47939647369542 1.17223039022708 2.11511021584683 0.0344205547323929 1 FALSE LachnospiraLachnospira pectinoschiza_nov_96.372% (SPN205) -1.73883219052701 1.13807915117396 -1.52786578045416 0.126545865895579 1 FALSE PrevotellaPrevotella copri_nov_97.397% (SPN216) 0.933106132616267 1.24525559323318 0.749329003368338 0.453658930833039 1 FALSE LachnospiraLachnospira eligens_nov_94.785% (SPN226) -0.792630362828134 1.30893698568263 -0.605552728281085 0.544811800822923 1 FALSE unclassified_Ruminococcaceaeunclassified_Ruminococcaceae sp._str._D16_nov_93.243% (SPN23) 1.15109407849667 1.17130389627585 0.982745880173844 0.325732523837094 1 FALSE EubacteriumEubacterium ruminantium_nov_97.279% (SPN236) 1.26690172042974 1.2539347142831 1.01034105364413 0.312331918635421 1 FALSE ButyrivibrioButyrivibrio sp._HMT_090_nov_92.795% (SPN246) 0.428337180816207 0.985785144492046 0.434513730714536 0.663915426157432 1 FALSE SporobacterSporobacter termitidis_nov_90.562% (SPN249) 2.21738993632006 1.27225073821975 1.74288752185975 0.0813532641055584 1 FALSE ParaprevotellaParaprevotella clara_nov_97.609% (SPN255) -0.544363819950271 1.04975113564919 -0.518564640193147 0.604064372486623 1 FALSE PrevotellaPrevotella colorans_nov_93.492% (SPN264) 0.391963545504805 1.1203260994703 0.349865584395586 0.726439576337444 1 FALSE SporobacterSporobacter termitidis_nov_93.243% (SPN275) 1.67427872055805 1.14958328903469 1.45642228495157 0.145275918793407 1 FALSE ChristensenellaChristensenella massiliensis_nov_90.766% (SPN289) 2.11656026631983 0.936888246482891 2.25913845569679 0 0 TRUE AcutalibacterAcutalibacter muris_nov_96.599% (SPN301) 2.83179041899259 0.873124442903188 3.24328386636014 0.00118160421864778 0.147700527330973 FALSE EubacteriumEubacterium coprostanoligenes_nov_92.777% (SPN334) 2.9858210721692 1.1664641108878 2.55971962128924 0.010475664150054 1 FALSE KineothrixKineothrix alysoides_nov_96.614% (SPN335) 2.31732111294407 1.06841044118492 2.16894278043 0 0 TRUE AsteroleplasmaAsteroleplasma anaerobium_nov_80.300% (SPN346) 1.00530931559694 1.07756162434913 0.932948327854717 0.350846648161953 1 FALSE SuccinivibrioSuccinivibrio dextrinosolvens_nov_97.079% (SPN35) 2.36825687152272 1.1414618428465 2.0747578084756 0 0 TRUE EubacteriumEubacterium coprostanoligenes_nov_95.711% (SPN358) 0.717987741080027 1.27104079768587 0.564881742889164 0.572154202502593 1 FALSE PrevotellaPrevotella oralis_nov_92.641% (SPN366) 0.811860154967093 0.970363106949414 0.836656040561336 0.402785935402236 1 FALSE DialisterDialister succinatiphilus_nov_96.567% (SPN377) -2.00174083397441 0.994044717020584 -2.01373318493575 0 0 TRUE DuncaniellaDuncaniella freteri_nov_87.069% (SPN39) 2.04950257738508 1.37123161970992 1.49464360938427 0.13500747845764 1 FALSE PrevotellaPrevotella copri_nov_96.537% (SPN390) 0.442012387656571 1.1154230055278 0.396273329011552 0.691903400556889 1 FALSE OscillibacterOscillibacter ruminantium_nov_93.049% (SPN399) 1.84100291987626 1.0555821951376 1.74406401354305 0.081147928235734 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_91.422% (SPN409) 0.173163213649115 0.805525472165459 0.214969258741884 0.829791286212302 1 FALSE RuminococcusRuminococcus bromii_nov_97.528% (SPN418) 2.41127556801819 1.09368022028687 2.20473546406984 0 0 TRUE DialisterDialister succinatiphilus_nov_96.360% (SPN436) 2.92964073324278 1.26770909041069 2.31097241110236 0.0208343788254516 1 FALSE OscillibacterOscillibacter ruminantium_nov_95.701% (SPN444) -1.97623076468927 1.02235323791178 -1.93302147575318 0.0532335522804554 1 FALSE PrevotellaPrevotella copri_nov_96.963% (SPN455) 0.541878715441496 1.02063732478205 0.530921907600439 0.595472895798518 1 FALSE FusicatenibacterFusicatenibacter saccharivorans_nov_97.279% (SPN462) -2.30486778411909 1.13949978989421 -2.02270136823199 0.0431039457560168 1 FALSE LacrimisporaLacrimispora xylanolytica_nov_97.285% (SPN536) -0.363506171428398 1.27752846968393 -0.284538607204842 0.775997651860674 1 FALSE Clostridiales_[F-1][G-2]Clostridiales_[F-1][G-2] bacterium_HMT_402_nov_91.011% (SPN55) 1.47174212445525 1.21599437776055 1.21031984306185 0.22615618635725 1 FALSE MonoglobusMonoglobus pectinilyticus_nov_90.112% (SPN567) -1.46938618486102 1.06932774398916 -1.37412144510478 0.169403982818545 1 FALSE ErysipelatoclostridiumErysipelatoclostridium [Clostridium] spiroforme_nov_93.333% (SPN610) -1.14452686434151 1.20921156049969 -0.946506717045075 0.343890197876473 1 FALSE LachnoclostridiumLachnoclostridium pacaense_nov_96.145% (SPN621) -1.84404541643756 1.20678976086357 -1.52805855356113 0.126498000713936 1 FALSE SporobacterSporobacter termitidis_nov_92.584% (SPN635) 1.67184677715318 1.26275297704672 1.32396977678345 0.185513082444017 1 FALSE RuminoclostridiumRuminoclostridium methylpentosum_nov_89.462% (SPN64) 1.08981567023786 1.22300437892833 0.891097112172912 0.372877074054762 1 FALSE Ruminococcaceae_[G-2]Ruminococcaceae_[G-2] bacterium_HMT_085_nov_92.809% (SPN75) 2.11913447494834 1.1609893703988 1.82528327044063 0.0679582934222784 1 FALSE AgathobaculumAgathobaculum desmolans_nov_97.738% (SPN87) 1.0825823032517 1.0627640516251 1.01864783777386 0.308370184719134 1 FALSE OscillibacterOscillibacter ruminantium_nov_92.601% (SPN96) 2.02375587296291 1.14880853033985 1.7616128532439 0.0781347307975378 1 FALSE HoldemanellaHoldemanella biformis_nov_97.854% (SPN98) 1.26492809340746 1.26028386844532 1.00368506261043 0.315530439202561 1 FALSE BacteroidesBacteroides sp._str._4136_uniformis (SPP1) -2.90586059894102 1.07896707578617 -2.69318746063102 0.00707724642888854 0.87050131075329 FALSE Anaerostipes_Lacnoclostridium_unclassified_LachnospiraceaeAnaerostipes_Lacnoclostridium_unclassified_Lachnospiraceae hadrus_sp._SSC/2_sp._str._cont1.81 (SPP104) -0.71540505793475 1.01525012524096 -0.704658921135274 0.48102252124265 1 FALSE Lactobacillus_LigilactobacillusLactobacillus_Ligilactobacillus ruminis (SPP105) 0.205056275547807 0.999611283188465 0.205136015365631 0.837465858527782 1 FALSE Blautia_MediterraneibacterBlautia_Mediterraneibacter [Ruminococcus] lactaris_lactaris (SPP117) -0.478842466240553 1.17451211225048 -0.407694787687669 0.683497764628551 1 FALSE RoseburiaRoseburia faecalis_faecis (SPP12) -1.98899878638628 1.24824573482844 -1.5934352755146 0.111062577464807 1 FALSE Blautia_MediterraneibacterBlautia_Mediterraneibacter [Ruminococcus] gnavus_gnavus (SPP137) -0.577516910875917 1.18256737024451 -0.488358570858006 0.625295881413382 1 FALSE Blautia_unclassified_LachnospiraceaeBlautia_unclassified_Lachnospiraceae sp._str._cont1.79_torques (SPP138) -2.47929830650295 0.927685728436331 -2.67256273380637 0 0 TRUE LacnoclostridiumLacnoclostridium sp._SM4/1_sp._str._M62/1 (SPP14) -2.10832327223827 1.31112991148471 -1.60802011590966 0.10783077320169 1 FALSE Bacteroides_PhocaeicolaBacteroides_Phocaeicola dorei_sp._Oral_Taxon_D25_sp._str._219_sp._str._313 ...(4 species) (SPP15) -0.73636479693654 1.0186409620643 -0.722889442266568 0.469747810412645 1 FALSE BifidobacteriumBifidobacterium adolescentis_faecale (SPP19) 0.308989433004955 1.22899821740453 0.251415688508887 0.801492739495018 1 FALSE Escherichia_ShigellaEscherichia_Shigella coli_dysenteriae_fergusonii_flexneri_sonnei (SPP26) 0.991895854708616 1.25953153429958 0.787511727731539 0.430982365849068 1 FALSE BlautiaBlautia obeum_wexlerae (SPP29) 0.34098397614655 1.26716903217146 0.269091153184377 0.787859538172015 1 FALSE Parasutterella_SutterellaParasutterella_Sutterella excrementihominis_sp._str._cont1.66 (SPP54) -1.41630591581129 1.02216399547416 -1.38559558161143 0.16587042815507 1 FALSE BifidobacteriumBifidobacterium catenulatum_pseudocatenulatum (SPP67) 1.22784958474138 1.25850416676122 0.975642049641574 0.329241878979408 1 FALSE BacteroidesBacteroides koreensis_kribbi (SPP68) -0.450131398516031 1.29919414382045 -0.346469694815866 0.728989755523084 1 FALSE Bacteroides_PhocaeicolaBacteroides_Phocaeicola plebeius (SPP74) -2.00084932505849 0.891885802918179 -2.24339183168055 0 0 TRUE RuminococcusRuminococcus multispecies_sppn1_2_nov_95.023% (SPPN1) -1.5339350218065 1.27400565387519 -1.20402528602653 0.228579805409693 1 FALSE RoseburiaRoseburia multispecies_sppn106_3_nov_96.833% (SPPN106) -1.19845134486852 1.14348518456114 -1.04806897461332 0.294606829365033 1 FALSE ChristensenellaChristensenella multispecies_sppn2_2_nov_91.216% (SPPN2) 3.05301599426516 1.03528543114277 2.94896064643272 0.00318844574227539 0.395367272042148 FALSE ClostridiumClostridium multispecies_sppn27_2_nov_97.959% (SPPN27) 0.118511583688417 0.842817846961545 0.140613519416639 0.888175267408824 1 FALSE multigenusmultigenus multispecies_sppn46_2_nov_92.568% (SPPN46) 1.14026735589113 0.989649421875801 1.15219322184804 0.249241682381323 1 FALSE RoseburiaRoseburia multispecies_sppn52_2_nov_97.072% (SPPN52) -0.0208038979438686 1.13732521456231 -0.0182919517456357 0.98540594797043 1 FALSE LacnoclostridiumLacnoclostridium multispecies_sppn68_2_nov_97.279% (SPPN68) 0.745643199938674 1.13514736720932 0.656869073987972 0.51126510506309 1 FALSE