taxon lfc: Day 0 - 2nd vs. Day 0 - 1st se: Day 0 - 2nd vs. Day 0 - 1st W: Day 0 - 2nd vs. Day 0 - 1st p: Day 0 - 2nd vs. Day 0 - 1st q: Day 0 - 2nd vs. Day 0 - 1st diff: Day 0 - 2nd vs. Day 0 - 1st Leptotrichia wadei (SP10) -2.52479440020633 1.99384951275317 -1.26629135451653 0.205408791052122 1 FALSE Leptotrichia hongkongensis (SP101) 0.923263570233646 2.12417135263723 0.434646465355718 0.663819062351683 1 FALSE Aggregatibacter sp._HMT_458 (SP103) 0.0486503363067928 1.87182254696143 0.0259908912764022 0.979264603706702 1 FALSE Capnocytophaga leadbetteri (SP104) -1.84986955813615 1.32277575266595 -1.39847555748424 0.161970307603526 1 FALSE Eikenella corrodens (SP105) -3.71070216054362 0.440551202910957 -8.42286239607343 3.67395886098385e-17 4.40875063318062e-15 TRUE Prevotella sp._HMT_317 (SP108) -1.25857610404256 2.68123425987463 -0.469401768759069 0.638782484331138 1 FALSE Anaeroglobus geminatus (SP109) 3.00287037593396 1.56269794666664 1.92159360184693 0.0546569143023347 1 FALSE Peptidiphaga sp._HMT_183 (SP11) -1.07946669316432 2.42086016348387 -0.44590212580096 0.655667946624015 1 FALSE Selenomonas sp._HMT_137 (SP110) -3.18239720496916 1.52628922523463 -2.08505514705441 0.0370642950099474 1 FALSE Prevotella sp._HMT_314 (SP111) 2.98189444976987 1.5377444331976 1.93913525901654 0.0524848703322897 1 FALSE Tannerella sp._HMT_286 (SP112) 2.17672793465537 1.56489141612645 1.39097697912063 0.164232407707334 1 FALSE Leptotrichia sp._HMT_392 (SP113) -0.393784218304535 2.02869674420257 -0.194106989834659 0.846092108623835 1 FALSE Actinomyces naeslundii (SP115) -3.70560138221523 1.53583769126585 -2.41275585518483 0.0158324209091045 1 FALSE Lancefieldella rimae (SP116) 4.72365662329362 0.868975002980427 5.43589471169175 5.4522144711592e-08 6.32456878654467e-06 TRUE Cardiobacterium hominis (SP117) -0.0240100930025955 1.82890843215079 -0.0131281001172703 0.989525592476761 1 FALSE Bergeyella sp._HMT_900 (SP119) 1.12758645140022 1.07942929341626 1.04461353631747 0.29620162083951 1 FALSE Sphingomonas oligophenolica (SP12) 1.42466350415305 1.47320888448864 0.967047863445081 0.333520107009443 1 FALSE Arachnia propionica (SP120) -3.20624692052491 1.26332795910858 -2.53793711870928 0.0111508017829007 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122) -3.5177514848201 0.436661607689168 -8.05601276337574 7.88234066961029e-16 9.37998539683625e-14 TRUE Tannerella serpentiformis (SP123) -3.79444473416376 1.22988530351857 -3.08520211056127 0.0020341387470215 0.22985767841343 FALSE Streptococcus chosunense (SP124) 0.92719287612177 2.0845331964475 0.444796407033434 0.656466891133026 1 FALSE Prevotella oulorum (SP127) 0.468322474042048 2.02337297974421 0.23145632502281 0.816960311818405 1 FALSE Capnocytophaga sp._HMT_380 (SP128) -3.31590785019864 0.426017697429632 -7.78349789270514 7.05463284336631e-15 8.25392042673858e-13 TRUE Streptococcus oralis_subsp._dentisani_clade_058 (SP129) -0.992509403061699 1.36033754172315 -0.72960524327255 0.465631516318834 1 FALSE Streptococcus intermedius (SP13) -0.542264065259596 1.26098121745017 -0.430033419812636 0.667171330884841 1 FALSE Lautropia mirabilis (SP130) -4.56035825849468 0.441773603105617 -10.3228400846857 5.55550677495667e-25 7.1666037396941e-23 TRUE Arachnia rubra (SP132) 2.03272765432699 1.49172531008876 1.36266887782848 0.172986890519659 1 FALSE Selenomonas flueggei (SP133) 1.49321187408001 1.56418616279778 0.954625420934025 0.33976715695592 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP134) -1.0738997683755 1.20730314020439 -0.889503002695491 0.373732810182985 1 FALSE Streptococcus sp._HMT_056 (SP136) -0.671088004549677 1.58537322481696 -0.423299696276351 0.672076615864288 1 FALSE Capnocytophaga sp._HMT_864 (SP137) -1.17916903578959 1.75820418576035 -0.670666720816418 0.502432867765846 1 FALSE Catonella morbi (SP138) -1.88496819351254 0.964314559131444 -1.95472335833063 0.0506157315289666 1 FALSE Rothia aeria (SP139) -2.64352176534356 0.924315738285298 -2.85997701418301 0.0042367171503285 0.470275603686463 FALSE Gemella morbillorum (SP14) -4.43699883667281 0.486229428845303 -9.12531939337731 7.15250399617928e-20 8.9406299952241e-18 TRUE Campylobacter gracilis (SP141) 0.0971358396019047 1.68085480988142 0.0577895479317202 0.953916263808166 1 FALSE Rothia dentocariosa (SP143) 0.824612962637425 0.407724898048667 2.02247389498151 0.0431274178198619 1 FALSE Scardovia wiggsiae (SP146) 1.84117975648995 1.29358641996935 1.42331407323646 0.154645129095504 1 FALSE Bergeyella sp._HMT_322 (SP15) -3.75267733491263 0.418214314484268 -8.97309634066528 2.88293740986319e-19 3.57484238823035e-17 TRUE Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP150) 2.11142036475167 1.52364797909919 1.38576652462729 0.16581820724878 1 FALSE Prevotella loescheii (SP154) -1.62774804478534 1.60968910289995 -1.0112189005025 0.31191167159726 1 FALSE Fretibacterium sp._HMT_360 (SP155) 1.20113140742529 1.17683066729781 1.02064930903209 0.307420618882964 1 FALSE Prevotella veroralis (SP157) 2.02711581925409 1.44163765505454 1.40612019403544 0.159688436805445 1 FALSE Prevotella sp._HMT_292 (SP159) -0.0718218599732663 2.11785223878831 -0.0339125925113443 0.972946851592796 1 FALSE Veillonella parvula (SP16) -1.97861050218041 1.85565177841715 -1.06626174436032 0.286305337687536 1 FALSE Streptococcus cristatus_clade_578 (SP160) -0.46880311282942 0.76855599083079 -0.609979127639946 0.541875634118151 1 FALSE Actinomyces sp._HMT_175 (SP161) -0.615401762369211 2.05051141041377 -0.300121110881812 0.764084776871256 1 FALSE Schaalia sp._HMT_180 (SP164) 1.37168687265565 1.40292506720468 0.977733525988477 0.328206135688738 1 FALSE Selenomonas sp._HMT_138 (SP165) -1.17364739999312 1.27970908259227 -0.917120473674919 0.359079513652277 1 FALSE Lachnoanaerobaculum saburreum (SP168) -1.06605626923877 1.20161092919298 -0.887189225180193 0.374977032473109 1 FALSE Dialister invisus (SP17) 0.95738711329444 0.368010391431235 2.60152195586394 0.00928111239976322 1 FALSE Capnocytophaga sp._HMT_336 (SP172) -1.83752945278579 0.976500600325866 -1.88174943484171 0.0598700442398887 1 FALSE Prevotella salivae (SP180) 0.0773830235507051 1.62785768996697 0.0475367251250786 0.962085460990604 1 FALSE Shuttleworthia satelles (SP184) 1.0100291184198 0.923840668466784 1.09329363048723 0.274264898602407 1 FALSE Schaalia sp._HMT_172 (SP192) -0.975411697410891 1.13584216120482 -0.858756375424772 0.390474940302288 1 FALSE Leptotrichia sp._HMT_498 (SP194) 1.26058171211887 1.25560683888597 1.003962126582 0.315396869138222 1 FALSE Solobacterium moorei (SP2) -2.17946710885561 1.27191520796905 -1.71353176312415 0.086614755020521 1 FALSE Prevotella intermedia (SP20) 2.23653511589711 1.61154078115514 1.38782408863025 0.165190617781502 1 FALSE Leptotrichia sp._HMT_223 (SP22) -4.09685662727594 0.434203662214814 -9.43533411574288 3.89750096641492e-21 4.9108512176828e-19 TRUE Porphyromonas sp._HMT_275 (SP23) -1.21442046334815 1.35144358744161 -0.898609808528633 0.36886053235867 1 FALSE Prevotella saccharolytica (SP24) -3.06976045548137 1.20817464455916 -2.54082509453877 0.0110591227715573 1 FALSE Veillonella dispar (SP25) 1.14359499293493 1.10062590834899 1.03904058977713 0.298785859284528 1 FALSE Stomatobaculum longum (SP26) 1.47154364532082 1.53542413049475 0.958395544328622 0.337863341177118 1 FALSE Neisseria elongata (SP27) 0.120278333589274 1.71527369819454 0.0701219483024057 0.944096597480624 1 FALSE Streptococcus sp._HMT_064 (SP3) -1.54565513217059 1.69024974249968 -0.914453700720436 0.36047849549264 1 FALSE Streptococcus mitis (SP30) 0.495861411066567 0.490611005758591 1.01070176829779 0.312159190463332 1 FALSE Selenomonas noxia (SP32) -4.1560235627617 1.54564611154351 -2.68885842090427 0.00716968204051131 0.781495342415733 FALSE Porphyromonas endodontalis (SP33) -2.42861317532153 1.12950776276296 -2.15015182310987 0.0315432075214178 1 FALSE Porphyromonas catoniae (SP34) -3.20872747085761 1.24697594812054 -2.57320718630848 0.0100760868568038 1 FALSE Ottowia sp._HMT_894 (SP35) -3.77763854320046 0.440891418090907 -8.56818343064586 1.05130243007594e-17 1.27207594039189e-15 TRUE Neisseria subflava (SP36) 0.900231439656851 1.50631422393593 0.597638544038033 0.55008113994405 1 FALSE Prevotella oris (SP37) 0.090927826217749 1.75098859958213 0.0519294221786759 0.958584930388889 1 FALSE Leptotrichia sp._HMT_215 (SP38) -4.64363415594368 0.454265888785227 -10.2222823033476 1.575861729435e-24 2.0171030136768e-22 TRUE Selenomonas sputigena (SP39) -0.696458916524306 1.43774007320827 -0.484412258865525 0.628093320078457 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP4) -1.75726442216953 1.56338567813846 -1.12401210190304 0.261007891988861 1 FALSE Prevotella sp._HMT_300 (SP40) 1.19077767456817 1.95601320470146 0.608777932432167 0.542671642614585 1 FALSE Streptococcus sanguinis (SP41) -2.64783830968253 1.25413629313765 -2.11128433502077 0.0347478796795298 1 FALSE Streptococcus vestibularis (SP43) -2.3414062859491 1.1352600749403 -2.06244043777566 0.0391658227357988 1 FALSE Capnocytophaga endodontalis (SP44) -3.99284020608261 1.25698005673985 -3.1765342534062 0.00149046187163096 0.16991265336593 FALSE Capnocytophaga ochracea (SP45) -4.62320896067621 0.407313022722572 -11.3505061286124 7.37346420498673e-30 9.65923810853262e-28 TRUE Streptococcus oralis_subsp._tigurinus_clade_070 (SP47) 2.57021899952887 1.43575554153814 1.79015084752893 0.0734296643895923 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP48) -1.47156546090358 1.61605631867262 -0.910590456471391 0.362511200822934 1 FALSE Leptotrichia sp._HMT_225 (SP49) -3.72518294616444 0.419777279852565 -8.87418906395506 7.04448039583411e-19 8.66471088687595e-17 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP50) -4.5601892591893 0.417132235501505 -10.932238918689 8.08291207576218e-28 1.05077856984908e-25 TRUE Aggregatibacter segnis (SP52) -1.26592997675515 1.34672306192971 -0.940007647111353 0.347213638162253 1 FALSE Porphyromonas pasteri (SP55) -2.33595929502057 1.52643331609364 -1.53033825349058 0.125933024200065 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP56) 3.52970449064177 1.81811665350031 1.94140705099766 0.0522089237285079 1 FALSE Selenomonas infelix (SP57) -0.981361181673718 1.73417172392194 -0.565896195939756 0.571464347692953 1 FALSE Streptococcus gordonii (SP6) 1.27127508836976 0.448591849343175 2.83392373319122 0.00459803041625781 0.50578334578836 FALSE Kingella oralis (SP61) 1.75704456308937 1.82592286405729 0.962277540676133 0.335910207679003 1 FALSE Campylobacter concisus (SP62) -0.118611285423639 1.4170243537871 -0.0837044791126148 0.933291395829277 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP63) -2.95253712367879 1.40857689411397 -2.09611355689319 0.0360721186796776 1 FALSE Leptotrichia buccalis (SP64) -4.8745370320351 0.414936378229672 -11.7476733489417 7.25900443093184e-32 9.58188584883003e-30 TRUE Prevotella melaninogenica (SP66) -0.96846768716348 2.23197442912017 -0.433906264573668 0.664356510412739 1 FALSE Streptococcus cristatus (SP67) -4.6128024589024 0.472030730309554 -9.77225032759491 1.48124816143841e-22 1.88118516502677e-20 TRUE Capnocytophaga gingivalis (SP68) -5.43301246325749 0.409282572886874 -13.2744778868442 3.25532105045462e-40 4.32957699710465e-38 TRUE Haemophilus parainfluenzae (SP69) -0.722849796845052 0.952718815594546 -0.758723124822465 0.448018200636156 1 FALSE Leptotrichia hofstadii (SP7) -1.86951769250963 1.55582568010209 -1.20162413850051 0.229509184899669 1 FALSE Granulicatella adiacens (SP70) -2.33440151009451 1.76020169136034 -1.32621251391391 0.184769315405027 1 FALSE Corynebacterium matruchotii (SP71) -0.746995617758225 1.58326621253303 -0.471806706822301 0.637064763291492 1 FALSE Campylobacter showae (SP72) -2.27858498914757 1.11356865809117 -2.04620071927438 0.0407366266160181 1 FALSE Filifactor alocis (SP73) 1.45168400112436 0.974546341772199 1.48959976442423 0.136329504001332 1 FALSE Capnocytophaga granulosa (SP75) -0.173359054752072 2.07033568269926 -0.0837347567357049 0.933267322294673 1 FALSE Leptotrichia sp._HMT_212 (SP76) -0.298998324047156 1.70087396924036 -0.175790993015604 0.860458145977899 1 FALSE Actinomyces sp._HMT_171 (SP77) -2.56213906952365 1.53246759739989 -1.67190423723855 0.094543207123112 1 FALSE Peptoanaerobacter [Eubacterium] yurii (SP79) -1.53209920882774 0.835952415241297 -1.83275887585718 0.0668384373461016 1 FALSE Fusobacterium nucleatum (SP8) -0.0653096485985255 0.355743415581957 -0.183586387654389 0.854337942691012 1 FALSE Parvimonas micra (SP81) 1.23837689062942 0.478432113657207 2.5884067044812 0.00964210622867375 1 FALSE Prevotella maculosa (SP82) -1.95162618764876 1.44233690470676 -1.35310008450872 0.17602365867222 1 FALSE Alloprevotella tannerae (SP83) 3.57059522313674 1.10774573191579 3.22329856054744 0.00126723394684005 0.145731903886606 FALSE Prevotella denticola (SP85) 0.510556283649026 0.505381234703191 1.01023989137403 0.312380371482029 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP88) -3.08675890325839 1.46306514027361 -2.10978911211098 0.0348765247108927 1 FALSE Cardiobacterium valvarum (SP89) -3.51745705884275 0.4102791603571 -8.57332616109776 1.00538244882571e-17 1.22656658756737e-15 TRUE Streptococcus oralis (SP9) 0.131606349514492 0.433362330913808 0.303686638469433 0.761366638496361 1 FALSE Actinomyces sp._HMT_169 (SP91) 2.1909894846038 2.12261952291962 1.03221018225166 0.301973666085154 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP99) -0.881744725792018 1.39708116571699 -0.631133499920529 0.527953238713987 1 FALSE Porphyromonas sp._HMT_284_nov_97.436% (SPN1) -0.699852173016068 0.936051111218222 -0.747664486082653 0.454662557464458 1 FALSE Aggregatibacter sp._HMT_458_nov_97.826% (SPN2) 1.28977249464349 1.29430021056939 0.996501803917726 0.319006391024642 1 FALSE Actinomyces sp._HMT_448_nov_96.718% (SPN22) -1.92905016938433 1.19666191405063 -1.61202604238871 0.106956272831651 1 FALSE Sphingomonas jeddahensis_nov_97.447% (SPN3) 3.92325136240751 2.03849294790203 1.92458422112533 0.0542813949777053 1 FALSE Selenomonas sp._HMT_137_nov_96.947% (SPN33) -3.51970686587594 0.442166056598677 -7.96014712877547 1.71834829875588e-15 2.02765099253194e-13 TRUE Selenomonas sp._HMT_137_nov_97.126% (SPN44) -2.46260784991425 1.17366758763891 -2.09821577749142 0.0358860884947368 1 FALSE Neisseria sp._HMT_020_nov_97.619% (SPN5) 2.35604171653417 1.18276611926514 1.99197599437324 0.0463736918453972 1 FALSE Actinomyces naeslundii_nov_97.593% (SPN55) -1.20121130527483 1.29972286133072 -0.924205721860557 0.355379217117085 1 FALSE Prevotella melaninogenica_nov_97.170% (SPN6) 1.25770396462845 1.25179275732113 1.00472219324864 0.315030638531072 1 FALSE Streptococcus sanguinis_nov_97.538% (SPN63) 4.27544338041931 1.4247599612164 3.00081662652081 0.00269256659344644 0.301567458466001 FALSE Selenomonas noxia_nov_96.337% (SPN66) 1.35458243796802 1.38023802295608 0.981412202416278 0.326389511118231 1 FALSE Selenomonas sp._HMT_137_nov_97.901% (SPN71) 2.19137378215038 1.62286592487199 1.35031104453267 0.176916231107065 1 FALSE Corynebacterium durum_nov_97.384% (SPN72) 1.44611261022377 1.50167207326848 0.963001600659863 0.33554671999538 1 FALSE Abiotrophia defectiva_nov_96.481% (SPN73) -1.85388424921713 0.838663755618461 -2.21052148348775 0.0270689912083343 1 FALSE Selenomonas sputigena_nov_97.026% (SPN74) 1.33191670090662 1.35017873332157 0.986474359309432 0.323900391504166 1 FALSE Selenomonas sp._HMT_479_nov_96.756% (SPN75) 1.32375230200257 1.33935230215327 0.988352578984917 0.322980003255739 1 FALSE Selenomonas flueggei_noxia (SPP3) 1.3017521229597 1.31018209271217 0.993565802952615 0.320434299756022 1 FALSE Veillonella dispar_parvula (SPP6) 0.307796199398956 0.437866539014452 0.702945240099283 0.48208987622691 1 FALSE