GroupPlaque Visit 2...1 GroupPlaque Visit 3...2 GroupPlaque Visit 2...3 GroupPlaque Visit 3...4 GroupPlaque Visit 2...5 GroupPlaque Visit 3...6 GroupPlaque Visit 2...7 GroupPlaque Visit 3...8 GroupPlaque Visit 2...9 GroupPlaque Visit 3...10 GroupPlaque Visit 2...11 GroupPlaque Visit 3...12 1 Coefficients Coefficients Standard Errors Standard Errors Test Statistics W Test Statistics W p Values p Values Adjusted p Values Adjusted p Values Differential Abundance Differential Abundance Veillonella parvula (SP1) -0.0819930380383217 -0.153571165791136 0.309971912807065 0.456183830027066 -0.264517637407221 -0.336643159364119 0.791381075978241 0.736385916824322 1 1 FALSE FALSE Actinomyces sp._HMT_171 (SP10) 0.544576842332492 -0.300840162642762 0.752308807861977 0.728358588499885 0.723874074903033 -0.413038532657887 0.469143047405552 0.679578382690641 1 1 FALSE FALSE Capnocytophaga sputigena (SP100) 0.729839862384825 0.242197346498092 0.718764839373563 0.693001045146376 1.01540840954451 0.349490593404423 0.309911186022338 0.726721031530102 1 1 FALSE FALSE Gemella haemolysans (SP101) 0.273908879057526 0.461955978939452 0.405983957038643 0.437950445088043 0.674679071201462 1.05481335644398 0.499879684122301 0.291510694790518 1 1 FALSE FALSE Selenomonas artemidis (SP102) -0.18140479866745 -0.00560601979295791 0.567791020401046 0.592678037045979 -0.319492193693586 -0.00945879456053304 0.749353309998174 0.992453086392056 1 1 FALSE FALSE Streptococcus sp._Oral_Taxon_71 (SP103) 0.169242345382882 -0.0373276407254915 0.809608684188616 0.720041092828269 0.209042156646942 -0.0518409867121212 0.834415329289751 0.958655396768023 1 1 FALSE FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP104) -0.256384062565899 0.114004893530922 0.546374718338049 0.580522115000394 -0.469245837995144 0.196383377282439 0.63889392455275 0.844310105944708 1 1 FALSE FALSE Streptococcus intermedius (SP105) 0.575235391566292 0.837840466727079 0.696479469272157 0.636709916087483 0.82591866227935 1.31589040088385 0.408850233370037 0.188210831050605 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP106) 0.154369253312182 0.11383853035844 0.529423921913489 0.56150702089404 0.291579671644317 0.202737501264338 0.770608020029415 0.839340210037438 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP109) 0.0023721386099352 -0.300035854696756 0.825680450314978 0.787000604376859 0.00287294995180071 -0.381239675075373 0.997707720742851 0.703025411673641 1 1 FALSE FALSE Neisseria subflava (SP11) -0.153394173280237 0.156707525120428 0.543115141003007 0.655245838014651 -0.282433984434596 0.239158367789471 0.777610759424047 0.810982783684946 1 1 FALSE FALSE Streptococcus parasanguinis_I (SP110) 0.772950929578966 0.616123878527321 0.389698284328712 0.35635129969183 1.98345992441419 1.72897890104551 0 0 0 0 TRUE TRUE Aggregatibacter sp._HMT_458 (SP112) -0.058023788229808 0.225589351676879 0.586348747145558 0.620193784853773 -0.0989578105389964 0.36374010379686 0.921171767935998 0.716052093228507 1 1 FALSE FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP114) 0.261709905800255 0.531652745704237 0.599800789401378 0.643652446348046 0.436328044952143 0.825993513612397 0.662598736926883 0.408807771315701 1 1 FALSE FALSE Streptococcus sp._str._2136FAA (SP116) 0.657399803833007 -0.660596055040076 0.844803708833091 0.708372523790596 0.778168699970623 -0.932554599245519 0.436469566413587 0.351049983771505 1 1 FALSE FALSE Capnocytophaga granulosa (SP117) 0.347693714480225 0.232040918348824 0.625532039602385 0.618421934983436 0.555836779681556 0.375214566661578 0.57832243980827 0.707500897663358 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP119) 0.836636268248645 -0.0134007061633488 0.669121765811623 0.512686705303653 1.2503498032736 -0.0261381971186708 0.211171792772977 0.979147110566422 1 1 FALSE FALSE Corynebacterium matruchotii (SP12) 0.512067299307156 -1.18364883886511 0.553859884989495 0.753443100946883 0.924543035495103 -1.57098636562943 0.355203655896986 0.116185815816034 1 1 FALSE FALSE Scardovia wiggsiae (SP121) 0.125796113953921 0.287603411065087 0.805521291300482 0.818168397541964 0.156167335752017 0.351521046191882 0.875901123092143 0.725197486085597 1 1 FALSE FALSE Peptidiphaga sp._HMT_183 (SP122) -0.442791536205945 0.115502044130549 0.904689837986949 0.913088425640322 -0.489440156851119 0.126496011653582 0.624530112020049 0.899339305927502 1 1 FALSE FALSE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP125) -0.742100487096802 0.253223098009328 0.475615585901336 0.590903483633293 -1.56029471929616 0.428535463105299 0.118690250728873 0.668261320304674 1 1 FALSE FALSE Capnocytophaga endodontalis (SP127) 0.221680549006661 0.396670679687294 0.57294838309411 0.615083355621834 0.386911902621163 0.644905566150899 0.698821429113797 0.51898838442384 1 1 FALSE FALSE Cardiobacterium valvarum (SP128) 0.0828227841743421 0.0411810082169043 0.498514951069711 0.494536156085018 0.166139017489087 0.0832719867095516 0.868047549301215 0.933635274281421 1 1 FALSE FALSE Prevotella histicola (SP129) 0.102142605000422 -0.0252763713706253 0.575171608677951 0.53752272069851 0.177586312431519 -0.0470238194541409 0.859047874771381 0.962494243345706 1 1 FALSE FALSE Granulicatella paradiacens (SP13) -0.0943144747932386 -0.550134707103503 0.742056743323131 0.755039237447738 -0.12709873691178 -0.728617374857399 0.89886225115401 0.46623574726354 1 1 FALSE FALSE Actinomyces sp._Oral_Taxon_180 (SP130) 0.465880469972241 -0.213591899251431 0.821057304753982 0.751580170372968 0.567415291569491 -0.284190439917324 0.570432063104074 0.776264441405807 1 1 FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP132) 0.9278992645693 0.354156474509861 0.696146154114573 0.651653310710482 1.3329086989635 0.543473759265848 0.182561767515563 0.586803653280095 1 1 FALSE FALSE Leptotrichia sp._AF189244.1 (SP134) 0.839898909102695 0.577603036374305 0.860439678858753 0.828698752627753 0.976127588881881 0.697000006990189 0.329001241115107 0.485802789434593 1 1 FALSE FALSE Leptotrichia sp._HMT_225 (SP138) -1.13601800738675 -0.643677733622281 0.473634745542839 0.582912274172342 -2.39851070487818 -1.10424460444964 0 0.269487045542112 0 1 TRUE FALSE Selenomonas sp._Oral_Taxon_137 (SP14) 0.471018733788227 0.283079411804145 0.514674801061977 0.479858879424058 0.915177375726049 0.589922212430259 0.360098519788714 0.555242801543885 1 1 FALSE FALSE Dialister invisus (SP140) 0.730435068883737 0.577900004009716 0.748314584333975 0.740944388703533 0.976106953112304 0.779950577695711 0.329011466078699 0.435419966197643 1 1 FALSE FALSE Actinomyces sp._HMT_175 (SP142) 0.961773359141266 1.23878245597204 0.834371382153768 0.765362768084675 1.15269217007256 1.61855594187329 0.249036756389408 0.105542841153233 1 1 FALSE FALSE Stomatobaculum longum (SP143) -0.244274631179099 -0.414424534506602 0.499946877335398 0.476034280619009 -0.488601173950773 -0.870577081061697 0.625124081741878 0.383985115006107 1 1 FALSE FALSE Fusobacterium sp._HMT_204 (SP147) 0.684659162229502 0.7895888287182 0.439553593777841 0.471865739694533 1.55762385274807 1.67333366738884 0.11932244092578 0.0942616281736627 1 1 FALSE FALSE Capnocytophaga gingivalis (SP149) -0.117961243807152 0.63792903529298 0.728127544872441 0.700882600101959 -0.162006292218787 0.910179586709927 0.871300898856278 0.362727807786739 1 1 FALSE FALSE Arachnia propionica (SP15) -0.317355784732922 0.618261035389022 0.897670365149476 0.870664660697585 -0.353532651910679 0.710102365810581 0.723689154426831 0.47764065934208 1 1 FALSE FALSE Ottowia sp._HMT_894 (SP150) -0.37363577767227 -0.13550013765691 0.458626121682876 0.502588530055573 -0.814684903470514 -0.269604516525531 0.415252696907284 0.787464525292426 1 1 FALSE FALSE Actinomyces israelii (SP152) 0.160240609134093 0.0801021015216853 0.46557353403453 0.488419374952088 0.344178947942964 0.16400271084566 0.730711713360555 0.869729009762104 1 1 FALSE FALSE Prevotella oulorum (SP154) 0.311952438419343 -0.212238090624036 0.679148698510104 0.620230384348442 0.459328625827739 -0.342192346553603 0.645998194229294 0.732206144524673 1 1 FALSE FALSE Capnocytophaga sp._HMT_864 (SP155) -0.274903413367781 -0.127256328375585 0.551054394300752 0.549346410154405 -0.498868017769122 -0.23165042316344 0.617872366277648 0.816809540525209 1 1 FALSE FALSE Leptotrichia buccalis (SP156) -0.490442409461195 -0.628691884113505 0.72543463743865 0.680720419843112 -0.67606698681061 -0.923568422199531 0.498998115735873 0.355711061108923 1 1 FALSE FALSE Actinomyces massiliensis (SP157) -0.269104266256582 -0.465346638132364 0.849264308348935 0.840002608880154 -0.316867509456215 -0.553982372450889 0.751344136298171 0.579590909646387 1 1 FALSE FALSE Fusobacterium nucleatum_ss_polymorphum (SP158) -0.152534674397421 -0.313954437356388 0.755577147491729 0.71920953648688 -0.20187835868751 -0.436527077894378 0.840011821005836 0.662454357536884 1 1 FALSE FALSE Campylobacter concisus (SP16) 0.0468764593536703 -0.152893022933932 0.677292354562354 0.676092108401536 0.0692115584029595 -0.226142297823017 0.944821222896374 0.821090747675116 1 1 FALSE FALSE Actinomyces sp._HMT_448 (SP161) 0.264555159438548 0.589960295084773 1.20409409322437 1.19098779375429 0.219713028182134 0.495353771196154 0.826094657564834 0.620350420824162 1 1 FALSE FALSE Rothia aeria (SP163) 0.993280895265029 0.939535737793085 0.799739483290492 0.823924297782934 1.24200557308765 1.14031803688912 0.214234505822335 0.25415382602145 1 1 FALSE FALSE Lachnoanaerobaculum umeaense (SP165) -0.0745629835419394 -0.0377010335495081 0.419123601100151 0.422730333963104 -0.177902135184514 -0.089184594812632 0.858799833961957 0.92893520814606 1 1 FALSE FALSE Schaalia sp._HMT_877 (SP166) -0.255598092335878 -0.289015408665591 0.684074639587876 0.651299854368166 -0.373640649052367 -0.443751686304258 0.708671687207913 0.657222122221948 1 1 FALSE FALSE Leptotrichia sp._HMT_215 (SP168) -0.508313510460547 0.481886337169363 0.481720038154152 0.65170992222786 -1.0552052441254 0.739418444822878 0.291331466276197 0.459652945467952 1 1 FALSE FALSE Streptococcus constellatus (SP169) -0.218486662665594 -0.10595706493688 0.415654193039974 0.45881794729482 -0.525645275144817 -0.230934874194874 0.59913469325906 0.817365397220528 1 1 FALSE FALSE Actinomyces naeslundii (SP17) 0.316263220827075 0.0307650192028645 0.846381856436199 0.87524007782113 0.373664934358048 0.0351503775734912 0.70865361686817 0.971959830713977 1 1 FALSE FALSE Leptotrichia sp._HMT_498 (SP170) -0.081514657399826 0.0950948714073655 0.567952754373745 0.560353844668864 -0.143523658917208 0.169705039613962 0.885876627559917 0.86524211052718 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP172) 0.0557875631870145 -0.034285454965514 0.44839255908743 0.448907431457177 0.124416790725862 -0.0763753338950564 0.900985279563852 0.939120492976107 1 1 FALSE FALSE Prevotella sp._HMT_317 (SP174) 0.0388146142567665 0.171847416674618 0.624667313846186 0.687267149401717 0.0621364579135383 0.250044566838696 0.950454163862485 0.802552883674983 1 1 FALSE FALSE Bergeyella sp._HMT_900 (SP175) 0.275631999629064 -0.449802907935857 0.522876794050909 0.403204071724565 0.527145214255248 -1.11557134334478 0.598092750386526 0.264605664227409 1 1 FALSE FALSE Streptococcus sobrinus (SP176) 0.111314617423981 0.400022940291798 0.464826568441797 0.643022340935922 0.239475591503154 0.62209804360695 0.810736821062921 0.533877401330669 1 1 FALSE FALSE Catonella morbi (SP178) -0.448807978839356 0.274131088246434 0.477099208726027 0.54926010850185 -0.940701578687973 0.499091567006655 0.346857809756295 0.617714878174297 1 1 FALSE FALSE Porphyromonas endodontalis (SP179) -0.279074444390414 -0.189576193460397 0.615764408138049 0.632371751795234 -0.453216263723784 -0.299785992847104 0.650393022416849 0.764340400302194 1 1 FALSE FALSE Streptococcus parasanguinis_II (SP18) -0.213817247873356 -0.0320428490106326 0.818837051563458 0.836834103672409 -0.261123073833922 -0.0382905630518809 0.793997598445718 0.969456014863728 1 1 FALSE FALSE Schaalia sp._HMT_180 (SP181) -0.279157712556105 -0.698328788311555 0.468303365504824 0.383588370002946 -0.596104433832495 -1.82051606076116 0.55110546236307 0 1 0 FALSE TRUE Kingella oralis (SP182) 0.636995796778529 0.922661751893311 0.797133687731752 0.737326924890735 0.799107861808103 1.25136044913868 0.424227871393109 0.21080300022924 1 1 FALSE FALSE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_872 (SP183) -0.256916282835112 0.789104376592735 0.611658224231858 0.637245121573902 -0.420032417871527 1.23830587301126 0.674461771780935 0.215602666957881 1 1 FALSE FALSE Leptotrichia sp._HMT_392 (SP184) -0.0336930143548239 0.762243375188438 0.452107205429509 0.572235937640043 -0.0745243914500655 1.33204387395172 0.940593133558102 0.182845771802382 1 1 FALSE FALSE Abiotrophia defectiva (SP188) -0.0685707992986192 0.168741706772104 0.705378174673937 0.748517289498733 -0.0972113991623235 0.225434614723605 0.922558515699558 0.821641185940932 1 1 FALSE FALSE Streptococcus sp._HMT_066 (SP19) -0.597544324982204 0.068411680010011 0.418905510795739 0.560217725259077 -1.426441785994 0.122116236108691 0 0.902806963558885 0 1 TRUE FALSE Arachnia rubra (SP193) -0.233489956815815 0.0293756254782641 0.898909899600045 0.90607442761347 -0.259747897892439 0.0324207643246673 0.795058243148202 0.974136503654462 1 1 FALSE FALSE Leptotrichia sp._HMT_212 (SP194) -0.345354183185609 -0.0611705972556809 0.666531590774756 0.707165128232374 -0.518136256353851 -0.0865011505991289 0.604363205418993 0.931068041455879 1 1 FALSE FALSE Schaalia georgiae (SP196) -0.539567200455921 -0.490656230572585 0.566776743504513 0.580691191363304 -0.951992484941515 -0.844952081020307 0.341100793175896 0.398137594222082 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP197) -0.703543492209932 -0.898002942723909 0.764471623172652 0.703238707158543 -0.920300336708561 -1.27695323591091 0.357415833176783 0.201618757646515 1 1 FALSE FALSE Actinomyces sp._Oral_Taxon_171 (SP2) 0.161749517679488 0.44203805986241 0.586266912261588 0.629033791783648 0.275897401501854 0.702725458689579 0.782626869787259 0.482226858749084 1 1 FALSE FALSE Actinomyces odontolyticus (SP20) -0.0217438711685045 -0.442134327031917 0.665494635279169 0.613398253089487 -0.0326732478607933 -0.720794891092419 0.973935157611609 0.47103571918563 1 1 FALSE FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP205) 0.186899306088634 -0.584160872710183 0.560483509685237 0.426027490579209 0.333460847391559 -1.37118116935596 0.738786439075417 0 1 0 FALSE TRUE Corynebacterium sp._Oral_Taxon_A16 (SP206) 0.0406457168361478 0.527628684408734 0.590450005640122 0.587986109989012 0.0688385408550936 0.897348892167867 0.945118139670163 0.369532774889083 1 1 FALSE FALSE Eikenella corrodens (SP209) 0.251081642729367 0.895967840378715 0.592826231529242 0.629322621382081 0.423533287455385 1.42370194545215 0.671906217268794 0.154532770323638 1 1 FALSE FALSE Actinomyces sp._HMT_896 (SP210) 0.15981152827295 -0.910623011745518 0.652478882871201 0.453517294096306 0.244929809175903 -2.00791242935963 0.806510780148208 0 1 0 FALSE TRUE Neisseria sp._Oral_Taxon_14 (SP214) 0.0213810377500504 0.298393025595446 0.522605874476748 0.559978886934342 0.0409123563171919 0.532864778579469 0.967365766779243 0.594127188112107 1 1 FALSE FALSE Mogibacterium neglectum (SP216) -0.0366648559349654 -0.643946403878087 0.614025922512768 0.560580624833453 -0.0597122280846425 -1.14871327218882 0.952384832511575 0.250674231276472 1 1 FALSE FALSE Actinomyces sp._HMT_525 (SP217) -0.266340968408017 -0.145378448153055 0.598764148832295 0.66493484505444 -0.444817828401104 -0.218635629091077 0.656451409244253 0.826933896183747 1 1 FALSE FALSE Fusobacterium nucleatum_ss_animalis (SP219) 0.344706201172655 0.881023299140858 0.439974298489263 0.567095375940891 0.7834689488824 1.55357165041086 0.433351780969848 0.120286625974768 1 1 FALSE FALSE Leptotrichia hofstadii (SP22) -0.0688651510916188 -0.21459847614039 0.738970803583383 0.767187740122916 -0.0931906250662152 -0.279720940412849 0.925752122092119 0.779691611277334 1 1 FALSE FALSE Selenomonas sp._Oral_Taxon_E83 (SP220) 0.23867548301132 -0.14254356838832 0.458144457364057 0.458796728829782 0.520961192861623 -0.310690027698965 0.602393805562035 0.756036279082778 1 1 FALSE FALSE Selenomonas sp._HMT_137 (SP229) 0.13919675213318 -0.168107262036736 0.426758055985188 0.351243320534549 0.326172523707463 -0.478606288600442 0.744293828509824 0.632218743748004 1 1 FALSE FALSE Streptococcus cristatus (SP23) 0.564645639486448 -0.094700225824403 0.593819584097479 0.712962849159824 0.950870693065183 -0.132826311968429 0.341670020678771 0.894330744791599 1 1 FALSE FALSE Pseudoleptotrichia goodfellowii (SP235) 0.059849079515743 0.0646894091394849 0.394485265947263 0.37250514989114 0.151714359653027 0.173660442435198 0.879412230917223 0.862132327430052 1 1 FALSE FALSE Prevotella saccharolytica (SP238) 0.222837865158865 0.220887256706669 0.41697119607563 0.427693441630732 0.534420284317306 0.516461640993274 0.593050788127411 0.605532023398318 1 1 FALSE FALSE Actinomyces sp._HMT_170 (SP24) 0.274922982925709 0.888992406392303 0.843509711841589 0.834785083650524 0.325927465998566 1.06493566284717 0.744479234520913 0.286905045166063 1 1 FALSE FALSE Selenomonas flueggei (SP242) -0.282819073979338 -0.21621110051642 0.46843821791719 0.490798458291218 -0.603748932435172 -0.440529298460286 0.546010576175064 0.659553797104276 1 1 FALSE FALSE Prevotella sp._HMT_300 (SP247) 0.326969025766817 -1.05710772302675 0.653068834479489 0.495230523502344 0.5006654865523 -2.13457707645063 0.616606565956921 0 1 0 FALSE TRUE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP249) -0.45124811551993 -0.331955438530382 0.472905879081473 0.52156515045633 -0.954202803307058 -0.636460158888964 0.339980995938306 0.524476540911377 1 1 FALSE FALSE Parvimonas sp._Oral_Taxon_110 (SP25) -0.0851866567091465 0.649301872560553 0.464406432364467 0.599963857922663 -0.18343125928603 1.08223497796804 0.854459650584654 0.279148129867302 1 1 FALSE FALSE Porphyromonas sp._HMT_284 (SP253) -0.208839854201579 0.248634955059134 0.401451260321609 0.495223322838459 -0.520212227093954 0.5020663276399 0.602915664150282 0.615620865204694 1 1 FALSE FALSE Prevotella veroralis (SP256) -0.609719366107676 -0.202108705965201 0.42754739389529 0.5096301068322 -1.42608603119448 -0.396579211580503 0.153843510401289 0.691677784877764 1 1 FALSE FALSE Prevotella loescheii (SP257) -0.0500141743219932 -0.167524427000166 0.50600071222126 0.505185757316567 -0.0988421026176806 -0.331609560590185 0.921263639094297 0.740184099418329 1 1 FALSE FALSE Actinomyces sp._HMT_414 (SP259) 0.155649269457009 -0.441195030191095 0.612191369064722 0.470052708953313 0.254249369269618 -0.93860756844381 0.799302912202001 0.347932265525031 1 1 FALSE FALSE Parvimonas micra (SP26) 0.221294036311692 0.120837544602039 0.785524360721907 0.780013847437511 0.281715052233797 0.154917178712933 0.778162011761669 0.876886610491619 1 1 FALSE FALSE Oribacterium sp._Oral_Taxon_78 (SP267) 0.541526481576944 0.556855289722352 0.459650574334176 0.45707322871598 1.17812641126658 1.21830650919259 0.238746214210861 0.223107517420344 1 1 FALSE FALSE Leptotrichia goodfellowii (SP268) 0.0698486388044345 0.175160779972219 0.361134144999153 0.414845479690036 0.193414662589156 0.422231381436519 0.846634233157094 0.672856137955091 1 1 FALSE FALSE Lancefieldella rimae (SP27) -0.483604820346572 -0.0783467804296225 0.579101234834918 0.63426012446409 -0.835095474255777 -0.123524682394027 0.40366395465961 0.901691630235617 1 1 FALSE FALSE Prevotella maculosa (SP273) 0.375903528641231 0.414616301731715 0.422953451849172 0.391900866353793 0.888758625796204 1.05796219740279 0.374132816096876 0.290072677097417 1 1 FALSE FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP279) -0.0584755732460597 -0.183810684300789 0.515271673890455 0.490054135251807 -0.113484936605484 -0.375082406367902 0.909646104776204 0.707599181146218 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP28) -0.338852708548158 -0.216040605378304 0.568393395811186 0.536113331809727 -0.596158771451879 -0.402975625786115 0.55106916522138 0.686966155558854 1 1 FALSE FALSE Capnocytophaga sp._HMT_336 (SP282) 0.353932494435733 0.156057455998385 0.630300596664077 0.630632463295773 0.561529683311349 0.247461818224211 0.574436500767804 0.804550837356458 1 1 FALSE FALSE Prevotella melaninogenica (SP29) -0.450625695992237 -0.187941098517571 0.703352181808027 0.720001431476179 -0.640682872176305 -0.261028784529283 0.521728744466644 0.794070309693774 1 1 FALSE FALSE Prevotella pleuritidis (SP295) -0.302686778631 0.782056004943957 0.288537310688931 0.510087023842666 -1.04903860754883 1.53318153254018 0 0.125231133161704 0 1 TRUE FALSE Mogibacterium timidum (SP301) 0.00331014690594267 -0.229241001982494 0.429650199641861 0.416541686707122 0.00770428341171929 -0.550343481332463 0.993852932024677 0.582083806208535 1 1 FALSE FALSE Haemophilus parainfluenzae (SP31) 0.00279859763068708 0.677740544749191 0.861768227619013 0.935084954262016 0.00324750616348359 0.72479034301656 0.997408869525517 0.468580661050355 1 1 FALSE FALSE Streptococcus oralis (SP32) 0.153046364516556 -0.274055572305604 0.591571827505041 0.586095381670613 0.258711381104861 -0.467595515809103 0.795857937609033 0.640073872265913 1 1 FALSE FALSE Prevotella oris (SP33) 0.0908967693651943 -0.414726733088493 0.82909749050787 0.81966048773838 0.10963339101354 -0.505973801705159 0.912700128068627 0.612875041221039 1 1 FALSE FALSE Campylobacter gracilis (SP34) 0.864319526118743 0.536336467114718 0.676487541374041 0.667001454394686 1.277657714676 0.80410089600397 0.201370140981853 0.421338707164102 1 1 FALSE FALSE Selenomonas noxia (SP35) 0.161684949443514 -1.07782804531878 0.751977492285362 0.746250906197957 0.215013017147802 -1.44432393497539 0.829757169690332 0.148647876091536 1 1 FALSE FALSE Neisseria sicca (SP36) -0.105079393087168 -1.20208971688766 0.887814818893512 0.778282783915397 -0.118357331789223 -1.54454106107829 0.905784532379612 0.122457311950766 1 1 FALSE FALSE Fusobacterium nucleatum (SP37) -0.165903923417495 0.25896144273573 0.793467747191313 0.807907051607732 -0.209087167064767 0.320533707708576 0.834380192504272 0.748563782092065 1 1 FALSE FALSE Streptococcus infantis (SP38) -0.939094123831117 -0.135762034919208 0.462609519891783 0.634907838198133 -2.02999307937026 -0.213829514696969 0.0423572427570948 0.830680007826314 1 1 FALSE FALSE Schaalia odontolytica (SP39) 0.378675542547605 0.0660905731933897 0.558358766250828 0.48111359083581 0.678193959575975 0.137369998379332 0.497648721957811 0.890738344031391 1 1 FALSE FALSE Granulicatella adiacens (SP4) -1.32712351421422 -0.829603830536653 0.710209555640132 0.673832037098846 -1.86863652238253 -1.23117302957051 0.0616734009201779 0.218258156327166 1 1 FALSE FALSE Porphyromonas pasteri (SP40) 0.336170793614287 -0.360659570479651 0.771741699770986 0.756859109361038 0.435600141490404 -0.476521410681217 0.663126868115475 0.633702957532365 1 1 FALSE FALSE Prevotella denticola (SP42) 0.346383126975881 -0.465494682731772 0.837400853982967 0.764761455556515 0.413640761564027 -0.608679581521316 0.679137216603807 0.542736843633962 1 1 FALSE FALSE Bergeyella sp._HMT_322 (SP43) -0.787430820182251 -0.349632239083246 0.701096018399883 0.705446789449569 -1.12314262171879 -0.495618159033723 0.261376926865182 0.620163838495702 1 1 FALSE FALSE Neisseria bacilliformis (SP45) 0.135185123043813 0.651669940068387 0.58127158711628 0.670928509342729 0.23256791840536 0.971295646248199 0.816096941650109 0.33140107621876 1 1 FALSE FALSE Porphyromonas catoniae (SP46) 0.392426369016457 0.800243154049996 0.685378616548773 0.707409656843869 0.572568737251422 1.13123018085491 0.56693673235041 0.257958222068554 1 1 FALSE FALSE Peptostreptococcus stomatis (SP47) -0.672967758590833 -0.409429237164984 0.47665275964607 0.534062254495993 -1.41186166443373 -0.766632042834354 0.157990697364141 0.443300318524708 1 1 FALSE FALSE Streptococcus sanguinis (SP49) -0.814819977203595 0.100493620532312 0.801777833874045 0.619945322182759 -1.01626653017649 0.162100780401868 0.309502482318889 0.871226491653209 1 1 FALSE FALSE Streptococcus sp._str._C300 (SP5) 0.043431802818029 -0.116289261930883 0.587471412781992 0.66171789469419 0.073930070252025 -0.175738426999357 0.941066028712239 0.860499444712595 1 1 FALSE FALSE Rothia mucilaginosa (SP50) -0.736820963492468 0.388751538428315 0.466296469531273 0.698896840453159 -1.58015556976687 0.55623593630249 0 0.578049575590512 0 1 TRUE FALSE Capnocytophaga sp._HMT_380 (SP52) 0.360067671192889 0.927141849728828 0.393864021706923 0.469713031544571 0.914192846638879 1.97384740781 0.360615522261377 0.0483990963750151 1 1 FALSE FALSE Neisseria mucosa (SP53) 0.226832111804044 -0.214384701784299 0.76659774808849 0.736301159284232 0.295894571005001 -0.291164422439189 0.767310597236755 0.770925571094455 1 1 FALSE FALSE Rothia dentocariosa (SP54) 0.53647381888565 -0.0700933060238089 0.877648153713876 0.886977777865909 0.611262972086816 -0.0790248727453524 0.541025500189127 0.937012839336295 1 1 FALSE FALSE Cardiobacterium hominis (SP55) 0.553293564240582 0.538212955946191 0.727295703556853 0.716043842075669 0.760754616773742 0.75164804767543 0.44680364597785 0.452262740690637 1 1 FALSE FALSE Tannerella sp._HMT_286 (SP56) -0.350808781026638 0.0467867615620841 0.601067410789663 0.618744265358607 -0.583642990335738 0.07561566899528 0.559460530250698 0.939724870099776 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP58) -0.77271311285571 -0.55574987881691 0.881844690869786 0.861971886791158 -0.876246260657943 -0.644742464729083 0.380896172591666 0.519094092560455 1 1 FALSE FALSE Oribacterium sinus (SP59) 0.217352573617204 0.000491245243907909 0.470382998225889 0.427128274937087 0.462075743462195 0.00115011174097586 0.644027004316089 0.999082343800983 1 1 FALSE FALSE Actinomyces viscosus (SP6) -0.72249827744128 -0.19876604148614 0.912261941033646 0.864759021124884 -0.791985552551549 -0.22985136509774 0.428369100362931 0.818207269506399 1 1 FALSE FALSE Lautropia mirabilis (SP60) -0.92185789013745 0.412786064047575 0.88643524643961 0.828435836648724 -1.03996077980892 0.498271617168833 0.298358122499407 0.618292610193269 1 1 FALSE FALSE Actinomyces dentalis (SP64) -0.0393938110907137 -0.860212512463384 0.940091089476289 0.841485039204517 -0.041904248994275 -1.02225526585306 0.966575029167439 0.306660099748068 1 1 FALSE FALSE Selenomonas sputigena (SP65) -0.396996811498914 -0.721857321624939 0.760251820580697 0.723582147327044 -0.522191201325475 -0.997616268300045 0.601537211557254 0.318465469355047 1 1 FALSE FALSE Corynebacterium durum (SP66) 0.139636943874902 0.4736404399424 0.765669958146146 0.720378247125451 0.182372238050183 0.657488537212753 0.855290611263193 0.510866839118919 1 1 FALSE FALSE Capnocytophaga leadbetteri (SP67) 0.0711621354780615 0.737117357234051 0.714951129627748 0.69746248991768 0.0995342653911371 1.05685591395897 0.920714083121828 0.290577351324094 1 1 FALSE FALSE Neisseria elongata (SP68) 0.164428630715015 -0.182343391807828 0.774602797374272 0.79131614478074 0.212274770078795 -0.230430521366845 0.831892677465898 0.817757246573605 1 1 FALSE FALSE Leptotrichia wadei (SP69) 1.3535730494092 0.636260062668353 0.966910421883982 0.948192794579742 1.39989498383089 0.671023937647993 0.161544768389055 0.502205280241839 1 1 FALSE FALSE Solobacterium moorei (SP70) 0.582294522886556 0.451872560308663 0.606118739564192 0.614608696782514 0.960693812742425 0.735219925579028 0.33670614312519 0.462205565828349 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP71) -0.18189688895458 -0.696359983088578 0.640082932782213 0.574737887879468 -0.284177064624952 -1.2116131505752 0.776274690994701 0.225660498240786 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP73) -0.145516842416978 -0.63403828587021 0.631874913876436 0.53125159121022 -0.230293748369055 -1.19348025749125 0.817863518153402 0.232681339565926 1 1 FALSE FALSE Gemella morbillorum (SP74) -0.151091968308908 0.13240418810762 0.753932158499573 0.741647822828349 -0.20040525743006 0.178527036731104 0.841163648060182 0.858309090002565 1 1 FALSE FALSE Neisseria flavescens|subflava (SP75) 0.330703439963932 0.767672615257105 0.523101660300714 0.56806900964305 0.632197266920968 1.35137210836317 0.527257983006678 0.176576263785069 1 1 FALSE FALSE Streptococcus salivarius (SP76) 0.328715728919533 0.480757333083421 0.737066515827688 0.785798993255181 0.445978377610062 0.611807010711326 0.655612864874625 0.540665450746715 1 1 FALSE FALSE Streptococcus australis (SP77) -0.489458081894286 0.490547733604785 0.453131587925575 0.633371882543569 -1.08016764872873 0.774501911317543 0.280067531784006 0.438634038353366 1 1 FALSE FALSE Streptococcus sp._Oral_Taxon_B66 (SP78) 0.163791769075338 -0.124364689041106 0.744147120206569 0.748058878792576 0.220106702865248 -0.166249866911332 0.825788054685491 0.867960317315305 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP79) -0.745178691345462 -0.142104670936897 0.647763152641922 0.708966147952811 -1.15038758889917 -0.200439289445955 0.249984269626957 0.841137034367948 1 1 FALSE FALSE Actinomyces sp._HMT_169 (SP80) 0.283124620298023 0.609677378609321 0.577236135303538 0.609982603557907 0.490483188737209 0.999499616961523 0.623792023016346 0.317552724541027 1 1 FALSE FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP81) -0.0889169966024764 -0.440689475856283 0.598745367217838 0.541234582769285 -0.14850552750937 -0.814230076728372 0.881943824004106 0.41551315831488 1 1 FALSE FALSE Streptococcus sp._HMT_056 (SP82) -0.103687846415268 -0.0775120578694112 0.55750523720865 0.529800294380416 -0.185985421292934 -0.146304293696286 0.852456193987123 0.88368117645292 1 1 FALSE FALSE Gemella sanguinis (SP83) -0.209841323641449 -0.0824714656632948 0.590561732864388 0.619719345518079 -0.355324959210718 -0.133078733558575 0.722346159116684 0.894131113699356 1 1 FALSE FALSE Alloprevotella tannerae (SP84) -0.526529793879802 0.286431472083218 0.712071004697898 0.802904791724217 -0.739434396859322 0.356744006307539 0.459643262006463 0.721283458005089 1 1 FALSE FALSE Streptococcus anginosus (SP85) 0.350508578708385 0.316316347956433 0.860042050580038 0.832973709298095 0.40754818729153 0.379743495413531 0.683605409921753 0.704135829774141 1 1 FALSE FALSE Actinomyces sp._str._ChDCB197 (SP86) 1.13309944366422 0.595803866210033 0.857994018856762 0.876858751407183 1.32063792842521 0.679475303466934 0.186622119882747 0.496836750569928 1 1 FALSE FALSE Streptococcus mitis (SP87) -0.759470010079092 -0.165723704408184 0.834616350311529 0.683763120248752 -0.909963014498352 -0.242370054044292 0.362842015380868 0.808493436124829 1 1 FALSE FALSE Streptococcus mutans (SP88) 0.468188294777055 0.368402659438259 0.898998895235025 0.865158978291004 0.520788509595061 0.425820766682656 0.602514108425872 0.670238453585621 1 1 FALSE FALSE Actinomyces sp._Oral_Taxon_178 (SP89) -1.39675068908678 -1.52338278993058 0.722527107022433 0.695164893512811 -1.93314641833003 -2.19139775921741 0.0532181632319175 0.0284230211256641 1 1 FALSE FALSE Streptococcus chosunense (SP9) 0.0785355713076488 0.703604295310393 0.618465581654582 0.629570328781813 0.126984546330844 1.11759443408305 0.898952629768372 0.263740247025294 1 1 FALSE FALSE Prevotella intermedia (SP90) -0.00747367065349214 0.0494901009546218 0.484144503061051 0.516285055305141 -0.0154368594629065 0.0958580932104872 0.987683657326365 0.923633278025785 1 1 FALSE FALSE Veillonella atypica (SP91) 0.132757959718034 0.134353780598103 0.555684326454031 0.582834377172986 0.238908951355885 0.230517941048331 0.811176184350291 0.817689323899857 1 1 FALSE FALSE Capnocytophaga ochracea (SP92) 0.245050113236826 -0.0401740986551096 0.681222202069329 0.690564317599793 0.359721266412698 -0.0581757522525106 0.719055586908406 0.953608634902384 1 1 FALSE FALSE Campylobacter showae (SP93) -0.96523762115883 0.0435748456923474 0.614090076096783 0.650387983572085 -1.57181765140055 0.0669982330439501 0.115992846695774 0.946583109868082 1 1 FALSE FALSE Actinomyces johnsonii (SP94) -0.45569544966897 -0.0089352632192268 0.765490373404689 0.747864274334741 -0.595298733336335 -0.0119477069915863 0.551643802466078 0.990467335849274 1 1 FALSE FALSE Actinomyces oris (SP96) 0.474411799446242 0.153407059581481 0.772513908603554 0.76671512462331 0.614114249805314 0.200083518186563 0.539139832471799 0.841415263314055 1 1 FALSE FALSE Streptococcus gordonii (SP97) 0.082017816776748 -0.436885638507546 0.813903869194998 0.792999363499349 0.100770889390007 -0.550928107406866 0.919732336081293 0.581682958649812 1 1 FALSE FALSE Actinomyces massiliensis_nov_97.431% (SPN1) 0.599062867481231 -0.237982049375406 0.498631775656077 0.286155206129923 1.20141334092279 -0.831653746908782 0.229590903638165 0 1 0 FALSE TRUE Actinomyces viscosus_nov_96.975% (SPN111) -0.52029940198823 -0.596851415337751 0.595549897474477 0.557394561220818 -0.873645355653055 -1.070788014204 0.382311418016161 0.284264757392512 1 1 FALSE FALSE Streptococcus sanguinis_nov_97.378% (SPN13) 0.610767691096694 0.105594683131045 0.40815521218411 0.326855241324642 1.49641036758631 0.32306253588929 0.13454674949178 0.746647882221312 1 1 FALSE FALSE Actinomyces israelii_nov_94.872% (SPN15) -0.276699983626355 -0.0182456205220072 0.626915402143663 0.657209056566481 -0.441367340282615 -0.0277622779840094 0.65894708224892 0.977851752165528 1 1 FALSE FALSE Actinomyces gerencseriae_nov_97.556% (SPN163) -0.330723499609141 -0.580724958173546 0.499386119288805 0.460420725002372 -0.662260096616496 -1.26129195893724 0.507804545373368 0.207203677239256 1 1 FALSE FALSE Abiotrophia defectiva_nov_96.296% (SPN27) 0.122641711056568 0.0564827069160677 0.568866507057207 0.55212165117628 0.215589614672524 0.102301199012451 0.829307651735044 0.91851760362837 1 1 FALSE FALSE Actinomyces israelii_nov_96.507% (SPN3) 0.0587776004089106 0.266445161271001 0.587118097922341 0.602881695478459 0.100112056870516 0.441952647209739 0.920255363424142 0.658523472244007 1 1 FALSE FALSE Actinomyces viscosus_nov_95.849% (SPN38) -0.171447732907496 0.247119435043969 0.605632628363618 0.64907377507599 -0.28308866609571 0.380726266463373 0.777108869534893 0.70340637635413 1 1 FALSE FALSE Actinomyces sp._HMT_175_nov_97.830% (SPN62) -0.576657937006765 -0.833886002982936 0.578849805717593 0.522155946596069 -0.996213406847202 -1.59700566165919 0.319146466677765 0.110264445200216 1 1 FALSE FALSE Capnocytophaga gingivalis_nov_97.471% (SPN74) -0.108413110654353 -0.139807130564796 0.542907623333545 0.516534021989555 -0.199689792507754 -0.270663934248311 0.841723197390882 0.786649517990855 1 1 FALSE FALSE Prevotella veroralis_nov_97.909% (SPN86) 0.0157466740150569 -0.497671271321401 0.556446903497992 0.450000213510391 0.028298610192758 -1.10593563376145 0.977423989062819 0.26875438002976 1 1 FALSE FALSE Fusobacterium nucleatum_nucleatum_ss_animalis (SPP19) 0.72055484417117 0.019186990727531 0.519391206196141 0.384845391759538 1.38730659197773 0.0498563608617134 0.165348293881269 0.960236853014854 1 1 FALSE FALSE Eubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP21) 0.654147318769661 -0.302451646663872 0.589147485511362 0.471698283798853 1.11032862713804 -0.641197259036131 0.26685744151488 0.521394530239854 1 1 FALSE FALSE Streptococcus salivarius_thermophilus (SPP25) 0.397881617958375 0.571048109035463 0.273300418873068 0.356319076212155 1.45583976636043 1.60263131322067 0 0 0 0 TRUE TRUE Streptococcus pneumoniae_sp._str._M334 (SPP36) 0.224102723463265 -0.178607525449875 0.499551619811581 0.427403899808079 0.448607740573018 -0.41788932092121 0.653714648919626 0.676028040753411 1 1 FALSE FALSE Atopobium_Lancefieldella parvula_parvulum (SPP6) -0.114483840045246 -0.3924361963388 0.730067207626747 0.705947229264514 -0.156812741141193 -0.555900186402965 0.87539243110805 0.57827909080832 1 1 FALSE FALSE Granulicatella adiacens_paradiacens (SPP7) -0.537218617243013 -0.217888672830303 0.769841736511859 0.768582269974646 -0.697829945771896 -0.283494274253153 0.485283549151586 0.776797970200354 1 1 FALSE FALSE