Group1Day 0 - 2nd...1 Group1Day 0 - 2nd...2 Group1Day 0 - 2nd...3 Group1Day 0 - 2nd...4 Group1Day 0 - 2nd...5 Group1Day 0 - 2nd...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Leptotrichia wadei (SP10) -0.706768294633532 1.22172175946496 -0.578501847215239 0.562925350626469 1 FALSE Leptotrichia hongkongensis (SP101) 2.50567793725945 1.60678200154352 1.55943863875275 0.118892597138429 1 FALSE Aggregatibacter sp._HMT_458 (SP103) 1.86717200431893 1.48271999475885 1.25928834231618 0.207926202405051 1 FALSE Capnocytophaga leadbetteri (SP104) -0.0194702581382478 0.828282737038276 -0.0235067776588805 0.981246032189934 1 FALSE Eikenella corrodens (SP105) -1.90517326619916 0.266925465221089 -7.13747286951863 0 0 TRUE Prevotella sp._HMT_317 (SP108) 0.563124951371777 2.25698063044892 0.249503670423512 0.802971202077936 1 FALSE Anaeroglobus geminatus (SP109) 4.83414350548833 1.12724434307138 4.28846109115688 0 0 TRUE Peptidiphaga sp._HMT_183 (SP11) 0.741747157130074 2.02259380204934 0.366730658611986 0.713819935275107 1 FALSE Selenomonas sp._HMT_137 (SP110) -1.36927668294436 1.05522112180862 -1.29762061680253 0.194417734054713 1 FALSE Prevotella sp._HMT_314 (SP111) 4.81309028601769 0.964206334097948 4.99176381217254 0 0 TRUE Tannerella sp._HMT_286 (SP112) 4.00379698962216 1.00685207461093 3.97654937659964 0 0 TRUE Leptotrichia sp._HMT_392 (SP113) 1.42821079117643 1.70293747887204 0.838674824470022 0.401651809512522 1 FALSE Actinomyces naeslundii (SP115) -1.88861021424513 1.11138969730341 -1.69932312565747 0.0892583176023042 1 FALSE Lancefieldella rimae (SP116) 6.5315115652084 0.961942634435027 6.78991795497714 1.12197332305171e-11 1.26782985504843e-09 TRUE Cardiobacterium hominis (SP117) 1.79509996484668 1.47347914409687 1.21827307297719 0.22312021908736 1 FALSE Bergeyella sp._HMT_900 (SP119) 2.95524748654352 0.582930670197362 5.06963801637502 0 0 TRUE Sphingomonas oligophenolica (SP12) 3.24809866706144 1.02028123868775 3.18353268089005 0 0 TRUE Arachnia propionica (SP120) -1.39267377154315 0.892236620158309 -1.56087941256664 0.118552205682016 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122) -1.71562873314092 0.280836502454884 -6.10899479997806 0 0 TRUE Tannerella serpentiformis (SP123) -1.97566312259408 0.866039791550416 -2.28126137144019 0.0225329850763833 1 FALSE Streptococcus chosunense (SP124) 2.74822198828735 1.66797791929762 1.64763691203095 0.0994272011270683 1 FALSE Prevotella oulorum (SP127) 2.28632199652856 1.68874591166752 1.35385790173193 0.175781716630345 1 FALSE Capnocytophaga sp._HMT_380 (SP128) -1.51794082580659 0.278086560577819 -5.45851918428765 0 0 TRUE Streptococcus oralis_subsp._dentisani_clade_058 (SP129) 0.807801708178352 1.21375016747359 0.66554199523596 0.505703892477268 1 FALSE Streptococcus intermedius (SP13) 1.27885962382615 0.808941493626087 1.58090496519551 0.113899768879895 1 FALSE Lautropia mirabilis (SP130) -2.74531623660361 0.28371032598264 -9.67647626886727 0 0 TRUE Arachnia rubra (SP132) 3.86425117160915 0.903153308265346 4.27862151004139 0 0 TRUE Selenomonas flueggei (SP133) 3.31628398445556 1.08005841257302 3.07046725052136 0 0 TRUE Fusobacterium nucleatum_subsp._vincentii (SP134) 0.744427864463144 1.39509950583861 0.533601984193708 0 0 TRUE Streptococcus sp._HMT_056 (SP136) 1.14750172827828 1.24818661676282 0.919335068064044 0.357920340718847 1 FALSE Capnocytophaga sp._HMT_864 (SP137) 0.629594343466123 1.43872473360351 0.437605838532577 0.661672038081672 1 FALSE Catonella morbi (SP138) -0.0838743521328547 0.96642006377763 -0.0867887115308834 0 0 TRUE Rothia aeria (SP139) -0.837187270121152 0.67717208736438 -1.23629914130036 0.21634739019273 1 FALSE Gemella morbillorum (SP14) -2.62338739171676 0.326731835018201 -8.02917594966106 0 0 TRUE Campylobacter gracilis (SP141) 1.91941248799751 1.3215580696852 1.45238603737989 0.146394296449538 1 FALSE Rothia dentocariosa (SP143) 2.64381093180098 0.262405344647011 10.0752937610987 7.10481635818933e-24 9.23626126564613e-22 TRUE Scardovia wiggsiae (SP146) 3.67463587830117 0.94991388750304 3.86838841567037 0 0 TRUE Bergeyella sp._HMT_322 (SP15) -1.94609679192163 0.25594251567999 -7.60364797834087 0 0 TRUE Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP150) 3.9398739657112 0.938330760775563 4.19881147502269 0 0 TRUE Prevotella loescheii (SP154) 0.193698171334223 1.84184747401438 0.105165152960278 0 0 TRUE Fretibacterium sp._HMT_360 (SP155) 3.0271222867251 0.869400726303154 3.48184927288588 0 0 TRUE Prevotella veroralis (SP157) 3.85628759033654 0.90731472973904 4.25022041849324 0 0 TRUE Prevotella sp._HMT_292 (SP159) 1.74867154228712 1.81893727723656 0.961369896681543 0.336366214805262 1 FALSE Veillonella parvula (SP16) -0.166513817917846 1.13586934409166 -0.146595925652879 0.883450969796607 1 FALSE Streptococcus cristatus_clade_578 (SP160) 1.33038050364727 0.923219814921073 1.44102247606222 0 0 TRUE Actinomyces sp._HMT_175 (SP161) 1.20210203463678 1.6845410839551 0.713608024218908 0.475469594329001 1 FALSE Schaalia sp._HMT_180 (SP164) 3.19550077508915 0.974281717818213 3.27985295900358 0 0 TRUE Selenomonas sp._HMT_138 (SP165) 0.645672592415419 1.32796048905074 0.486213707214256 0 0 TRUE Lachnoanaerobaculum saburreum (SP168) 0.752180151851233 1.24197273376312 0.605633385824953 0 0 TRUE Dialister invisus (SP17) 2.77639888168445 0.279828118865615 9.92180090027976 3.34662522303994e-23 4.31714653772152e-21 TRUE Capnocytophaga sp._HMT_336 (SP172) -0.0410018928588243 1.05783685832935 -0.0387601287816525 0 0 TRUE Prevotella salivae (SP180) 1.8936939298842 1.3931793962356 1.35926064870109 0.174064008950026 1 FALSE Shuttleworthia satelles (SP184) 2.84196839155936 0.740003145851586 3.84048149996559 0 0 TRUE Schaalia sp._HMT_172 (SP192) 0.841601480716126 1.16989954773804 0.71937926836824 0 0 TRUE Leptotrichia sp._HMT_498 (SP194) 3.08559987942293 0.886744445206892 3.47969462464805 0 0 TRUE Solobacterium moorei (SP2) -0.387595994537428 0.88240857200911 -0.439247766660891 0.660482017306319 1 FALSE Prevotella intermedia (SP20) 4.0628632523617 1.18488444334553 3.42891095851521 0 0 TRUE Leptotrichia sp._HMT_223 (SP22) -2.28591844979159 0.305479883615067 -7.48304085604557 0 0 TRUE Porphyromonas sp._HMT_275 (SP23) 0.592470834778811 1.32308781986167 0.447794035955039 0.654301848069866 1 FALSE Prevotella saccharolytica (SP24) -1.25811041968916 0.697072879634894 -1.80484775185648 0.0710985096495461 1 FALSE Veillonella dispar (SP25) 2.97083979483746 0.787471770837493 3.77263021336995 0 0 TRUE Stomatobaculum longum (SP26) 3.29471744349491 1.06113511164251 3.10489909093205 0 0 TRUE Neisseria elongata (SP27) 1.95932052111771 1.5046547130471 1.30217285343151 0.192857302905287 1 FALSE Streptococcus sp._HMT_064 (SP3) 0.273455600751112 1.28506538412701 0.212795087416412 0.831486795668133 1 FALSE Streptococcus mitis (SP30) 2.31797075472692 0.246736441723434 9.39452128974577 5.74785981889265e-21 7.12734617542689e-19 TRUE Selenomonas noxia (SP32) -2.33652108367369 0.883498665183736 -2.64462321874337 0.00817819247568116 0.597008050724725 FALSE Porphyromonas endodontalis (SP33) -0.630000658851585 0.799631240437964 -0.787863989038908 0.43077626701826 1 FALSE Porphyromonas catoniae (SP34) -1.39521134734608 0.685263800633909 -2.03602079382483 0.0417482672935292 1 FALSE Ottowia sp._HMT_894 (SP35) -1.97099527896055 0.276291940677714 -7.1337414841921 0 0 TRUE Neisseria subflava (SP36) 2.71529215400611 1.17332504616117 2.3141857943712 0.020657532859688 1 FALSE Prevotella oris (SP37) 1.9092892748531 1.1198659952099 1.7049265564093 0.0882081227856648 1 FALSE Leptotrichia sp._HMT_215 (SP38) -2.82813616746177 0.400683430361595 -7.05828081013863 0 0 TRUE Selenomonas sputigena (SP39) 1.12633466869168 0.982387252438078 1.14652818010042 0.251576674066141 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP4) 0.0643034436581962 1.00298367394637 0.0641121538949741 0.94888092434835 1 FALSE Prevotella sp._HMT_300 (SP40) 3.01390703989534 1.71551097785579 1.75685674927153 0.07894222929773 1 FALSE Streptococcus sanguinis (SP41) -0.833025359565966 1.36928368920354 -0.608365794564093 0 0 TRUE Streptococcus vestibularis (SP43) -0.530283302220157 1.15019796789726 -0.461036549377318 0 0 TRUE Capnocytophaga endodontalis (SP44) -2.17306872897297 0.691650781964548 -3.14185826957449 0.00167879279003623 0.127588252042754 FALSE Capnocytophaga ochracea (SP45) -2.80752316645537 0.284904725228236 -9.85425273029878 0 0 TRUE Streptococcus oralis_subsp._tigurinus_clade_070 (SP47) 4.39368827695679 1.09068313538131 4.02838196945325 5.61620443641829e-05 0.00516690808150482 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP48) 0.343433256867666 1.10193933390943 0.311662580960099 0.755296968500188 1 FALSE Leptotrichia sp._HMT_225 (SP49) -1.91905753890646 0.287814159495268 -6.66769676054805 0 0 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP50) -2.74498575543911 0.323168310559135 -8.49398182231984 0 0 TRUE Aggregatibacter segnis (SP52) 0.554079703210129 1.40200955308434 0.395203942791392 0 0 TRUE Porphyromonas pasteri (SP55) -0.510388933443104 0.972710656335454 -0.524707866742121 0.599786287771345 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP56) 5.3552006428139 1.19700459884568 4.47383464355788 0 0 TRUE Selenomonas infelix (SP57) 0.824287337193975 1.38685021368399 0.594359310804273 0.552271816931139 1 FALSE Streptococcus gordonii (SP6) 3.05597985351896 0.280278423162611 10.9033717937893 1.11063753180185e-27 1.45493516666042e-25 TRUE Kingella oralis (SP61) 3.57350918248776 1.46246330911778 2.44348638369838 0.0145461184900159 1 FALSE Campylobacter concisus (SP62) 1.69824175276472 1.10028382594192 1.54345789034107 0.122719717029335 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP63) -1.14327419400982 0.812459447928075 -1.40717693286155 0.159374929874554 1 FALSE Leptotrichia buccalis (SP64) -3.05744692563296 0.311137487040307 -9.82667487198953 0 0 TRUE Prevotella melaninogenica (SP66) 0.852972481422224 1.85113634449581 0.460783174593521 0.64495417429011 1 FALSE Streptococcus cristatus (SP67) -2.79762548766045 0.433234010885489 -6.4575389220767 0 0 TRUE Capnocytophaga gingivalis (SP68) -3.613731690623 0.281098053712519 -12.8557691627377 0 0 TRUE Haemophilus parainfluenzae (SP69) 1.08840150251962 1.11735935207815 0.974083673703834 0 0 TRUE Leptotrichia hofstadii (SP7) -0.0471001979994394 1.02819248961196 -0.0458087356942423 0.963462696044641 1 FALSE Granulicatella adiacens (SP70) -0.511482351286559 1.31699267015218 -0.388371448739692 0.697741169876099 1 FALSE Corynebacterium matruchotii (SP71) 1.07512013915306 0.969040576387273 1.10946864904385 0.267228061811079 1 FALSE Campylobacter showae (SP72) -0.468604608501076 1.12628005772941 -0.416064020032269 0 0 TRUE Filifactor alocis (SP73) 3.30248541015817 0.608491496405496 5.42733206571781 0 0 TRUE Capnocytophaga granulosa (SP75) 1.63881405410032 1.55879312809693 1.05133518012174 0.293104674906679 1 FALSE Leptotrichia sp._HMT_212 (SP76) 1.52303169525059 1.63607037733349 0.930908423226185 0.351900936978448 1 FALSE Actinomyces sp._HMT_171 (SP77) -0.743561818991175 1.10115569169896 -0.675255846740386 0.499513230752804 1 FALSE Peptoanaerobacter [Eubacterium] yurii (SP79) 0.254765838808143 0.831024924114781 0.306568228479457 0 0 TRUE Fusobacterium nucleatum (SP8) 1.75775452277236 0.180124197122816 9.75856964721878 1.69529288738713e-22 2.13606903810779e-20 TRUE Parvimonas micra (SP81) 3.0419825111637 0.234595495557153 12.9669263424651 1.88436211488418e-38 2.50620161279596e-36 TRUE Prevotella maculosa (SP82) -0.140282339314626 0.887419760341568 -0.158078899731319 0.874394627119716 1 FALSE Alloprevotella tannerae (SP83) 5.38074281856764 1.0402787609081 5.17240476376789 2.31100294855054e-07 2.38033303700705e-05 TRUE Prevotella denticola (SP85) 2.33270277301132 0.329483728758572 7.0798724471174 1.44287206369381e-12 1.67373159388482e-10 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP88) -1.27493275021182 1.00785423930638 -1.26499715979689 0.20587234600521 1 FALSE Cardiobacterium valvarum (SP89) -1.71482510494615 0.299767103130966 -5.72052465742698 0 0 TRUE Streptococcus oralis (SP9) 1.95413223705875 0.281789820574977 6.93471550204136 4.07039473952521e-12 4.64025000305874e-10 TRUE Actinomyces sp._HMT_169 (SP91) 4.01115691177703 1.64262455075773 2.44191949397489 0.0146094041142051 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP99) 0.941609302247968 0.988495212498001 0.952568399262604 0.340808794716158 1 FALSE Porphyromonas sp._HMT_284_nov_97.436% (SPN1) 1.11063196068585 1.00718335626162 1.10271079618333 0 0 TRUE Aggregatibacter sp._HMT_458_nov_97.826% (SPN2) 3.11440775346752 0.911794026307907 3.41569221074915 0 0 TRUE Actinomyces sp._HMT_448_nov_96.718% (SPN22) -0.1157809368212 0.721925631950833 -0.160377927721349 0.872583375680196 1 FALSE Sphingomonas jeddahensis_nov_97.447% (SPN3) 5.74723749677544 1.35348384868351 4.24625495336762 0 0 TRUE Selenomonas sp._HMT_137_nov_96.947% (SPN33) -1.71768635284328 0.269178820531936 -6.38120915103529 0 0 TRUE Selenomonas sp._HMT_137_nov_97.126% (SPN44) -0.649384054612421 1.29832315011385 -0.500171359153134 0 0 TRUE Neisseria sp._HMT_020_nov_97.619% (SPN5) 4.20130120928242 0.747184352322307 5.62284421003258 0 0 TRUE Actinomyces naeslundii_nov_97.593% (SPN55) 0.618334875195142 1.35005282806509 0.458007910758089 0 0 TRUE Prevotella melaninogenica_nov_97.170% (SPN6) 3.08276295242454 0.949774545186435 3.24578392635214 0 0 TRUE Streptococcus sanguinis_nov_97.538% (SPN63) 6.10435057185205 0.923915980615002 6.60704079151083 0 0 TRUE Selenomonas noxia_nov_96.337% (SPN66) 3.17854146775714 0.967709219895685 3.28460388968886 0 0 TRUE Selenomonas sp._HMT_137_nov_97.901% (SPN71) 4.02013931840111 1.12978379842294 3.55832622490497 0 0 TRUE Corynebacterium durum_nov_97.384% (SPN72) 3.26942061407309 0.859920215264942 3.80200460000324 0 0 TRUE Abiotrophia defectiva_nov_96.481% (SPN73) -0.0814397910152476 0.42756136549261 -0.190475093373831 0.848936858505272 1 FALSE Selenomonas sputigena_nov_97.026% (SPN74) 3.15608800738292 0.759617555435291 4.15483816138815 0 0 TRUE Selenomonas sp._HMT_479_nov_96.756% (SPN75) 3.14800609971535 0.974857866763802 3.22919494937827 0 0 TRUE Selenomonas flueggei_noxia (SPP3) 3.12624552774559 0.733261288844041 4.26348093825326 0 0 TRUE Veillonella dispar_parvula (SPP6) 2.13007080267147 0.234147601329569 9.09712843768719 9.27516403485681e-20 1.14084517628739e-17 TRUE