GroupStatic Day 3 LR...1 GroupStatic Day 3 LR...2 GroupStatic Day 3 LR...3 GroupStatic Day 3 LR...4 GroupStatic Day 3 LR...5 GroupStatic Day 3 LR...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus oralis (SP1) 3.4306274003258 0.399737561269174 8.58219925451462 9.3076232271731e-18 6.79456495583636e-16 TRUE StreptococcusStreptococcus sp._str._C300 (SP10) 3.6498916424412 0.340489706386087 10.7195359330556 8.24158006220465e-27 6.42843244851963e-25 TRUE PrevotellaPrevotella nanceiensis (SP101) 2.85858119939372 0.815001547039966 3.50745493646718 0 0 TRUE SelenomonasSelenomonas sputigena (SP102) -3.07930567265604 0.209291681842946 -14.7129864194353 0 0 TRUE ActinomycesActinomyces sp._HMT_175 (SP103) 0.544207058453912 1.2889308430098 0.422215870933096 0 0 TRUE StreptococcusStreptococcus cristatus_clade_578 (SP104) 2.83387854200915 0.723150685085186 3.91879396709044 0 0 TRUE ActinomycesActinomyces odontolyticus (SP106) 0.592601061735412 1.30522288213819 0.454022887466259 0 0 TRUE LeptotrichiaLeptotrichia sp._AF189244.1 (SP108) 0.191798034285493 1.57444728685583 0.121819279620669 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_392 (SP109) -1.72030690091455 1.45530605479399 -1.18209286304253 0 0 TRUE LeptotrichiaLeptotrichia hofstadii (SP11) 0.329308792729245 1.51909256409541 0.216779938571645 0 0 TRUE AlloprevotellaAlloprevotella sp._HMT_473 (SP113) 2.83387854200915 0.723150685085186 3.91879396709044 0 0 TRUE ActinomycesActinomyces sp._HMT_171 (SP115) -1.16968079371364 1.23145271650585 -0.94983816920922 0 0 TRUE RothiaRothia dentocariosa (SP119) -3.04099680355607 0.212369072002791 -14.3193958276378 0 0 TRUE GranulicatellaGranulicatella adiacens (SP12) -2.50485450090474 0.231795572466746 -10.8063086548561 0 0 TRUE OttowiaOttowia sp._HMT_894 (SP120) 0.661814183328159 1.19389576910222 0.554331626307568 0 0 TRUE PrevotellaPrevotella sp._HMT_292 (SP121) 0.30646881058366 1.53766031861792 0.199308525343959 0 0 TRUE GranulicatellaGranulicatella paradiacens (SP13) -1.57377524806836 1.45547260528086 -1.08128125693212 0 0 TRUE StreptococcusStreptococcus mitis (SP14) -3.50471421257559 0.257199341545175 -13.6264509524804 0 0 TRUE SolobacteriumSolobacterium moorei (SP15) 8.531859186867 0.963432800576393 8.85568685409366 8.31700681223349e-19 6.23775510917512e-17 TRUE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP16) 3.95895250709545 0.925901760438457 4.27578030008356 0 0 TRUE PorphyromonasPorphyromonas sp._Oral_Taxon_B43 (SP17) 4.4275654928264 1.05390683643491 4.20109761105989 0 0 TRUE KingellaKingella oralis (SP18) -0.716472089034399 1.11148541840858 -0.644607726892398 0 0 TRUE FusobacteriumFusobacterium canifelinum (SP19) 3.17340173567401 1.06686780811122 2.97450322481114 0 0 TRUE PrevotellaPrevotella sp._HMT_300 (SP2) -1.21002300451438 1.24416579415238 -0.972557684997881 0 0 TRUE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP20) 3.99647544838172 0.527525853658893 7.57588546734224 3.56686382123897e-14 2.49680467486728e-12 TRUE CapnocytophagaCapnocytophaga gingivalis (SP21) -4.09244299566862 0.224309744435555 -18.2446063855438 0 0 TRUE NeisseriaNeisseria elongata (SP22) -1.06917143363524 1.26922725613625 -0.842379824784089 0 0 TRUE GemellaGemella moribillum (SP23) 7.12821568701151 1.266787958025 5.62699987938378 1.83370855785386e-08 1.19191056260501e-06 TRUE PorphyromonasPorphyromonas catoniae (SP24) 4.37114505512023 1.27861072143468 3.41866760683467 0.000629285479941119 0.0339814159168204 TRUE LeptotrichiaLeptotrichia sp._HMT_223 (SP25) -1.36684838467327 1.3080539304655 -1.0449480352747 0 0 TRUE VeillonellaVeillonella atypica (SP26) 3.75807478275574 1.46586010518181 2.56373358512927 0 0 TRUE GemellaGemella morbillorum (SP27) -1.18677855850949 1.53559071052872 -0.772848227312386 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP28) -2.89625637713469 0.209131285897866 -13.848986605233 0 0 TRUE PorphyromonasPorphyromonas endodontalis (SP29) 6.17620389155869 1.20754778455851 5.11466624388432 3.14296179733692e-07 1.98006593232226e-05 TRUE VeillonellaVeillonella parvula (SP3) 2.02982393452907 0.499382055045501 4.06467135536964 4.81001897676244e-05 0.00288601138605746 TRUE PorphyromonasPorphyromonas pasteri (SP30) -3.20156784593742 0.364401623135183 -8.78582213326125 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP31) -1.5999759248612 1.46879899629751 -1.08930897208832 0 0 TRUE PeptostreptococcusPeptostreptococcus stomatis (SP32) 7.77877519300397 0.303424122503074 25.6366406495092 0 0 TRUE PrevotellaPrevotella maculosa (SP33) -2.16069317080121 0.150781179218125 -14.3299925229759 0 0 TRUE StreptococcusStreptococcus cristatus (SP35) -2.78177476269747 0.418788632025916 -6.64243140803623 0 0 TRUE PrevotellaPrevotella denticola (SP36) -3.68081087246603 0.206653691001827 -17.8114934924317 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP37) -1.56974616791375 1.39266519771622 -1.12715257801223 0 0 TRUE CapnocytophagaCapnocytophaga granulosa (SP38) 0.218906013562022 1.81181885956962 0.120821136398823 0.90383270832092 1 FALSE CampylobacterCampylobacter gracilis (SP39) 0.649234074000544 0.970721871450735 0.668815747429559 0 0 TRUE Saccharibacteria_(TM7)_[G-3]Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP4) 4.7521345518055 1.17921112159321 4.02992684243429 0 0 TRUE LautropiaLautropia mirabilis (SP40) -3.10211245544474 0.189779213018167 -16.3459021992455 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP41) -1.76557897047358 0.81202972469176 -2.1742787447144 0.029684207702251 1 FALSE PrevotellaPrevotella saccharolytica (SP42) 3.18253472707004 1.07413682650571 2.96287646837618 0 0 TRUE PrevotellaPrevotella intermedia (SP43) 7.53212000059088 0.303049184701713 24.8544473333748 0 0 TRUE StreptococcusStreptococcus vestibularis (SP44) 3.83501025744234 1.60157977380978 2.39451716371252 0 0 TRUE CardiobacteriumCardiobacterium valvarum (SP45) -2.0705575049246 0.142988130877539 -14.4806250156379 0 0 TRUE SelenomonasSelenomonas artemidis (SP46) -1.04921242094226 0.109134915714517 -9.61390233430767 0 0 TRUE LeptotrichiaLeptotrichia wadei (SP48) -4.02049180390682 0.220592350731849 -18.2258894769842 0 0 TRUE CapnocytophagaCapnocytophaga ochracea (SP49) -3.12361599938307 0.199033682941173 -15.6939064445001 0 0 TRUE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP5) 2.06297231807052 0.39694779053771 5.19708729270413 2.02435317876483e-07 1.29558603440949e-05 TRUE ArachniaArachnia propionica (SP50) -0.144975192888651 1.38727918359111 -0.104503256881119 0.916769983815702 1 FALSE DialisterDialister invisus (SP51) -3.01050898565445 0.372074903176715 -8.09113691880644 0 0 TRUE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP52) -2.73872157348609 0.217611840599342 -12.5853518169929 0 0 TRUE CapnocytophagaCapnocytophaga sp._HMT_864 (SP55) -0.635720789862189 1.12449102616214 -0.565340918754942 0 0 TRUE Absconditabacteria_(SR1)_[G-1]Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP56) 1.25597416766322 0.21238923647719 5.91354905029808 3.3481375923872e-09 2.24325218689942e-07 TRUE SelenomonasSelenomonas sp._Oral_Taxon_137 (SP57) -2.88144063284559 0.312867106426539 -9.20979091012927 0 0 TRUE SelenomonasSelenomonas sp._HMT_137 (SP58) 0.619716274886729 0.9947731352174 0.622972467738882 0 0 TRUE SelenomonasSelenomonas sp._Oral_Taxon_G00 (SP59) 0.217827513275972 1.60973955311473 0.135318482331189 0 0 TRUE NeisseriaNeisseria flavescens|subflava (SP6) 8.41074098738538 0.613876350048961 13.7010343967715 0 0 TRUE CapnocytophagaCapnocytophaga leadbetteri (SP60) -3.62661816801522 0.252422079500809 -14.3672779147816 0 0 TRUE ActinomycesActinomyces naeslundii (SP61) -1.56420308225657 1.41607488397755 -1.10460477758277 0 0 TRUE PrevotellaPrevotella sp._HMT_317 (SP62) -4.35090304001136 0.233412802900527 -18.6403787022153 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_215 (SP63) -1.48665732416583 1.38782514658396 -1.07121371004491 0 0 TRUE StreptococcusStreptococcus intermedius (SP64) 0.710007926265195 1.15500128664621 0.614724792495125 0 0 TRUE BergeyellaBergeyella sp._HMT_322 (SP65) -2.21486614730047 0.203366420861755 -10.8910120850585 0 0 TRUE PrevotellaPrevotella oris (SP66) -1.63275028421098 1.44344786482897 -1.13114600394967 0.257993644171284 1 FALSE CapnocytophagaCapnocytophaga sp._HMT_380 (SP67) -1.98993346666989 0.26017728002313 -7.64837524050134 0 0 TRUE ActinomycesActinomyces sp._HMT_169 (SP68) 0.415112795445587 1.16154469398357 0.357379959286747 0 0 TRUE StreptococcusStreptococcus sanguinis (SP69) 0.297753717215553 1.25723945324973 0.236831350182271 0 0 TRUE FusobacteriumFusobacterium nucleatum (SP7) 2.35938832294177 0.311765685061544 7.56782556898786 3.79523113883485e-14 2.61870948579605e-12 TRUE HaemophilusHaemophilus parainfluenzae (SP70) 0.834233021360253 1.05490994834178 0.79080970150257 0 0 TRUE SelenomonasSelenomonas noxia (SP72) -1.80104500955333 1.54178553338161 -1.1681553436314 0 0 TRUE PrevotellaPrevotella melaninogenica (SP74) -1.3506105110516 1.3997748681495 -0.964876953989829 0 0 TRUE CatonellaCatonella morbi (SP77) 0.784389110036599 0.860634754391859 0.911407662813783 0 0 TRUE LeptotrichiaLeptotrichia buccalis (SP78) -3.72056432885496 0.187152773709407 -19.8798246753847 0 0 TRUE CapnocytophagaCapnocytophaga endodontalis (SP8) -1.59313965483545 1.46101867145687 -1.09043072888783 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_225 (SP80) -2.61107160382637 0.183843241365874 -14.2027065255555 0 0 TRUE EikenellaEikenella corrodens (SP81) 0.717498878215881 1.14895867360458 0.624477533177847 0 0 TRUE TannerellaTannerella sp._HMT_286 (SP83) -3.0609454790075 0.156121024071562 -19.6062349527278 0 0 TRUE SelenomonasSelenomonas sp._Oral_Taxon_E83 (SP84) -2.565389558938 0.164040156370162 -15.6387900115696 0 0 TRUE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP86) 0.649234074000544 0.970721871450735 0.668815747429559 0 0 TRUE CampylobacterCampylobacter concisus (SP87) -0.888956029499459 1.18609113205691 -0.749483750003119 0 0 TRUE SelenomonasSelenomonas sp._HMT_138 (SP89) 0.299911222050758 1.25548003626239 0.23888171327965 0 0 TRUE FusobacteriumFusobacterium periodonticum (SP9) 4.04976412143914 1.70251061608726 2.3787012446045 0 0 TRUE CapnocytophagaCapnocytophaga sputigena (SP90) 6.29584977593596 0.250801760197711 25.1028931015988 0 0 TRUE PeptidiphagaPeptidiphaga sp._HMT_183 (SP91) -1.77327009428036 1.488931575657 -1.19096815681264 0 0 TRUE AggregatibacterAggregatibacter segnis (SP93) -1.27365531191556 1.33541042291328 -0.953755706906195 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_212 (SP94) 0.383064841927953 1.41937015238072 0.269883681353617 0 0 TRUE CampylobacterCampylobacter showae (SP95) 0.530960282237407 1.06710626022145 0.497570206482735 0 0 TRUE ParvimonasParvimonas micra (SP96) -0.25138533628422 0.849859253298582 -0.295796433713595 0 0 TRUE AlloprevotellaAlloprevotella tannerae (SP98) 0.766366702946507 0.875310329533005 0.8755371404738 0 0 TRUE ActinomycesActinomyces sp._HMT_448_nov_96.718% (SPN10) -0.410117202782105 0.914029884875382 -0.448691240372322 0 0 TRUE BergeyellaBergeyella zoohelcum_nov_92.673% (SPN11) 8.71028603549445 0.234088303304142 37.2094030865673 0 0 TRUE BulleidiaBulleidia extructa_nov_96.008% (SPN12) 3.20852190755995 0.56373974998372 5.69149489219557 0 0 TRUE GemellaGemella moribillum_nov_93.519% (SPN13) 3.27616885555884 1.1495135096449 2.85004815347572 0 0 TRUE PrevotellaPrevotella sp._HMT_305_nov_93.688% (SPN2) 4.92474077155783 1.25082971784747 3.93717921895293 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_215_nov_97.292% (SPN9) 5.90213040041604 0.276740151370101 21.3273367496383 0 0 TRUE StreptococcusStreptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP1) -2.1907180289447 0.156138493647168 -14.0306081977142 0 0 TRUE GranulicatellaGranulicatella adiacens_paradiacens (SPP5) -0.798701066617352 1.36553403402871 -0.584900153869441 0 0 TRUE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP6) -0.124410669886871 0.868391642607807 -0.143265623231082 0 0 TRUE