GroupDynamic Day 3 UR...1 GroupDynamic Day 3 UR...2 GroupDynamic Day 3 UR...3 GroupDynamic Day 3 UR...4 GroupDynamic Day 3 UR...5 GroupDynamic Day 3 UR...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus oralis (SP1) 2.86324363664922 0.264607644794117 10.820713962656 2.74629596454904e-27 2.08718493305727e-25 TRUE StreptococcusStreptococcus sp._str._C300 (SP10) 3.43932447899587 0.575794867413976 5.97317668780662 2.32677659911795e-09 1.55894032140902e-07 TRUE PorphyromonasPorphyromonas sp._HMT_284 (SP100) 3.20450045330327 1.14984472114283 2.78689843452802 0 0 TRUE PrevotellaPrevotella nanceiensis (SP101) 4.27426924458728 1.01024722047848 4.23091413462425 0 0 TRUE SelenomonasSelenomonas sputigena (SP102) -3.0995905149692 0.230182558331515 -13.4657922713027 0 0 TRUE ActinomycesActinomyces sp._HMT_175 (SP103) 0.523922216140754 1.30476109846408 0.401546472191344 0 0 TRUE StreptococcusStreptococcus cristatus_clade_578 (SP104) 3.08104252387097 0.940211685282673 3.27696684916723 0 0 TRUE Absconditabacteria_(SR1)_[G-1]Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP105) 3.21234395244 1.15615836137184 2.77846362554382 0 0 TRUE ActinomycesActinomyces odontolyticus (SP106) 0.572316219422254 1.32307550804002 0.432565047077376 0 0 TRUE LeptotrichiaLeptotrichia sp._AF189244.1 (SP108) 0.171513191972336 1.58998348256936 0.107871052657211 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_392 (SP109) -1.74059174322771 1.46407657499896 -1.18886660230114 0 0 TRUE LeptotrichiaLeptotrichia hofstadii (SP11) 0.309023950416087 1.53676943267023 0.201086736791179 0 0 TRUE ActinomycesActinomyces sp._HMT_171 (SP115) -1.1899656360268 1.24043460970388 -0.959313475065706 0 0 TRUE RothiaRothia dentocariosa (SP119) -3.06128164586923 0.235758424106525 -12.9848240098772 0 0 TRUE GranulicatellaGranulicatella adiacens (SP12) -2.5251393432179 0.243313170938461 -10.3781448964658 0 0 TRUE OttowiaOttowia sp._HMT_894 (SP120) 0.641529341015002 1.209855914112 0.530252680118412 0 0 TRUE PrevotellaPrevotella sp._HMT_292 (SP121) 0.286183968270503 1.55532425903396 0.184002767659688 0 0 TRUE GranulicatellaGranulicatella paradiacens (SP13) -1.59406009038152 1.46674538591506 -1.0868008215257 0 0 TRUE StreptococcusStreptococcus mitis (SP14) -3.52499905488875 0.278617688156752 -12.6517418122627 0 0 TRUE SolobacteriumSolobacterium moorei (SP15) 8.94937447401339 0.983879576058435 9.09600594603853 9.37148619052269e-20 6.84118491908156e-18 TRUE KingellaKingella oralis (SP18) -0.736756931347556 1.1233468071979 -0.655858837739826 0 0 TRUE FusobacteriumFusobacterium canifelinum (SP19) 5.94377941675481 0.265260559851961 22.407324406131 0 0 TRUE PrevotellaPrevotella sp._HMT_300 (SP2) -1.23030784682754 1.25212405017187 -0.98257664379074 0 0 TRUE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP20) 3.56571319344763 0.253363711841081 14.0734960327869 5.5268195841938e-45 4.8083330382486e-43 TRUE CapnocytophagaCapnocytophaga gingivalis (SP21) -4.11272783798177 0.246992584006409 -16.6512199324781 0 0 TRUE NeisseriaNeisseria elongata (SP22) -1.0894562759484 1.28134062918067 -0.850247195115503 0 0 TRUE GemellaGemella moribillum (SP23) 3.51434577284466 1.80889303593291 1.94281569060947 0.0520384314017189 1 FALSE PorphyromonasPorphyromonas catoniae (SP24) 3.63543254842604 1.28938211541 2.81951525849266 0.00480962442652694 0.259719719032455 FALSE LeptotrichiaLeptotrichia sp._HMT_223 (SP25) -1.38713322698643 1.31678979033297 -1.05342039949723 0 0 TRUE VeillonellaVeillonella atypica (SP26) 5.03844749696747 1.37473777570895 3.66502440392252 0 0 TRUE GemellaGemella morbillorum (SP27) 4.21320507189021 1.56624816740298 2.68999840483529 0.0071452360592557 0.364407039022041 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP28) -2.91654121944785 0.230330945410819 -12.6623941661243 0 0 TRUE PorphyromonasPorphyromonas endodontalis (SP29) 5.52651542692799 1.23671135290297 4.46871892455377 7.8689449562879e-06 0.000495743532246138 TRUE VeillonellaVeillonella parvula (SP3) 1.8268509745606 0.380284249076702 4.80390912586056 1.55597470101065e-06 0.000101138355565692 TRUE PorphyromonasPorphyromonas pasteri (SP30) -3.22185268825057 0.385923293743798 -8.34842762922068 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP31) -1.62026076717436 1.48017777247487 -1.09463930434874 0 0 TRUE PeptostreptococcusPeptostreptococcus stomatis (SP32) 7.92909741305713 0.303519033695694 26.1238885631364 0 0 TRUE PrevotellaPrevotella maculosa (SP33) -2.18097801311437 0.176900151927169 -12.3288645563872 0 0 TRUE StreptococcusStreptococcus cristatus (SP35) -0.467704452081804 1.15383620465074 -0.40534735363359 0.685222203326396 1 FALSE PrevotellaPrevotella denticola (SP36) -3.70109571477919 0.230824553785387 -16.0342374937302 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP37) -1.59003101022691 1.4014285257751 -1.13457873946693 0 0 TRUE CapnocytophagaCapnocytophaga granulosa (SP38) -1.19793040942661 1.38467773772495 -0.865133003000997 0 0 TRUE CampylobacterCampylobacter gracilis (SP39) 0.628949231687386 0.97722186599411 0.643609454079876 0 0 TRUE Saccharibacteria_(TM7)_[G-3]Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP4) 3.19646793611025 1.03262219798466 3.09548636698756 0 0 TRUE LautropiaLautropia mirabilis (SP40) -3.1223972977579 0.212483712749667 -14.694760635308 0 0 TRUE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP41) -2.20345146895186 0.483730867241385 -4.555118596251 5.23560310618144e-06 0.000335078598795612 TRUE PrevotellaPrevotella intermedia (SP43) 5.61080368917629 1.62413140797364 3.45464884284003 0 0 TRUE CardiobacteriumCardiobacterium valvarum (SP45) -2.09084234723776 0.169539142099587 -12.3325051745844 0 0 TRUE SelenomonasSelenomonas artemidis (SP46) -1.06949726325542 0.138386247575073 -7.72834932658483 0 0 TRUE LeptotrichiaLeptotrichia wadei (SP48) -4.04077664621998 0.244182825635792 -16.5481607303822 0 0 TRUE CapnocytophagaCapnocytophaga ochracea (SP49) -1.73739827330419 1.16329631870527 -1.49351308464372 0.135302931771948 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP5) 0.031686574746064 1.64546386199839 0.0192569253435813 0.984636146146563 1 FALSE ArachniaArachnia propionica (SP50) -1.0894562759484 1.1955071395394 -0.911292153694828 0 0 TRUE DialisterDialister invisus (SP51) -3.03079382796761 0.391721290025782 -7.7371179589655 0 0 TRUE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP52) -2.75900641579925 0.240514294570986 -11.4712783317956 0 0 TRUE CapnocytophagaCapnocytophaga sp._HMT_864 (SP55) 0.499239668757896 1.45366071388407 0.343436170482977 0.731270352262282 1 FALSE Absconditabacteria_(SR1)_[G-1]Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP56) -1.97912548585692 1.01235508813308 -1.9549716389599 0.050586417858995 1 FALSE SelenomonasSelenomonas sp._Oral_Taxon_137 (SP57) -2.90172547515875 0.334998149918355 -8.66191492659273 0 0 TRUE SelenomonasSelenomonas sp._HMT_137 (SP58) 0.599431432573571 1.0012451852871 0.59868595762754 0 0 TRUE SelenomonasSelenomonas sp._Oral_Taxon_G00 (SP59) 0.197542670962814 1.62735616194292 0.121388713535804 0 0 TRUE NeisseriaNeisseria flavescens|subflava (SP6) 10.0201461116588 0.29851379647506 33.566777247751 0 0 TRUE CapnocytophagaCapnocytophaga leadbetteri (SP60) -3.64690301032838 0.275325889939132 -13.2457685368224 0 0 TRUE ActinomycesActinomyces naeslundii (SP61) -1.58448792456973 1.42552795346022 -1.11150954334053 0 0 TRUE PrevotellaPrevotella sp._HMT_317 (SP62) -4.37118788232451 0.256364147236145 -17.0506988962777 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_215 (SP63) -1.50694216647899 1.39737494752656 -1.07840931966497 0 0 TRUE StreptococcusStreptococcus intermedius (SP64) 0.689723083952038 1.17102091853519 0.588992965911145 0 0 TRUE BergeyellaBergeyella sp._HMT_322 (SP65) -2.23515098961363 0.226825462022623 -9.85405681391579 0 0 TRUE PrevotellaPrevotella oris (SP66) -3.41410303610347 0.173929950649522 -19.6291841822174 0 0 TRUE CapnocytophagaCapnocytophaga sp._HMT_380 (SP67) -2.01021830898305 0.283130012822328 -7.09998311003686 0 0 TRUE ActinomycesActinomyces sp._HMT_169 (SP68) 0.39482795313243 1.16785680333968 0.338079079561257 0 0 TRUE StreptococcusStreptococcus sanguinis (SP69) 0.277468874902396 1.26348005299622 0.219606850337214 0 0 TRUE FusobacteriumFusobacterium nucleatum (SP7) 1.95199247183745 0.381062905297903 5.12249406777456 3.01520585012174e-07 1.99003586108035e-05 TRUE HaemophilusHaemophilus parainfluenzae (SP70) 0.813948179047096 1.07110341370929 0.759915586701709 0 0 TRUE SelenomonasSelenomonas noxia (SP72) -1.82132985186648 1.5522002697523 -1.17338586222327 0 0 TRUE PrevotellaPrevotella melaninogenica (SP74) -1.37089535336476 1.41033578316341 -0.972034723737785 0 0 TRUE CatonellaCatonella morbi (SP77) 0.764104267723441 0.867284308375425 0.881030891882205 0 0 TRUE LeptotrichiaLeptotrichia buccalis (SP78) -3.74084917116812 0.211849197812657 -17.6580756962613 0 0 TRUE CapnocytophagaCapnocytophaga endodontalis (SP8) 2.01193650305831 1.53461704127731 1.31103490248206 0.189845972060045 1 FALSE LeptotrichiaLeptotrichia sp._HMT_225 (SP80) -1.23480486546405 1.15325186359042 -1.07071569051684 0.284297285533183 1 FALSE EikenellaEikenella corrodens (SP81) 0.697214035902724 1.16498791836327 0.598473190075877 0 0 TRUE TannerellaTannerella sp._HMT_286 (SP83) -3.08123032132066 0.18228184606145 -16.9036598426918 0 0 TRUE SelenomonasSelenomonas sp._Oral_Taxon_E83 (SP84) -2.58567440125116 0.18959576866746 -13.6378275708583 0 0 TRUE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP86) 0.628949231687386 0.97722186599411 0.643609454079876 0 0 TRUE CampylobacterCampylobacter concisus (SP87) -0.909240871812616 1.19801636675161 -0.75895530065086 0 0 TRUE SelenomonasSelenomonas sp._HMT_138 (SP89) 0.279626379737601 1.26172184669275 0.221622840620983 0 0 TRUE FusobacteriumFusobacterium periodonticum (SP9) 8.95199872602832 0.309301677966599 28.9426128719387 0 0 TRUE CapnocytophagaCapnocytophaga sputigena (SP90) 7.28839256409431 0.257820309298279 28.2692724399076 0 0 TRUE PeptidiphagaPeptidiphaga sp._HMT_183 (SP91) -1.79355493659352 1.49804265204859 -1.19726560131036 0 0 TRUE AggregatibacterAggregatibacter segnis (SP93) -1.29394015422872 1.3468869495096 -0.96068950307956 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_212 (SP94) 0.362779999614796 1.43505106478412 0.252799366181001 0 0 TRUE CampylobacterCampylobacter showae (SP95) 0.51067543992425 1.07350237933832 0.475709648858921 0 0 TRUE ParvimonasParvimonas micra (SP96) -0.271670178597377 0.85880633292696 -0.316334624212048 0 0 TRUE AlloprevotellaAlloprevotella tannerae (SP98) 0.746081860633349 0.881937589215259 0.845957661581481 0 0 TRUE ActinomycesActinomyces sp._HMT_448_nov_96.718% (SPN10) -0.430402045095263 0.922653700888858 -0.466482760195538 0 0 TRUE BergeyellaBergeyella zoohelcum_nov_92.673% (SPN11) 8.87653659675094 0.368990933284201 24.0562458208536 0 0 TRUE BulleidiaBulleidia extructa_nov_96.008% (SPN12) 2.65175776110209 0.665638289069515 3.98378188972413 0 0 TRUE PrevotellaPrevotella sp._HMT_305_nov_93.688% (SPN2) 5.60695576073633 1.51212150996802 3.70800608534092 0 0 TRUE LeptotrichiaLeptotrichia sp._HMT_215_nov_97.292% (SPN9) 2.81359369969599 0.792208618721991 3.55158178439783 0 0 TRUE StreptococcusStreptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP1) -2.21100287125785 0.178431285816454 -12.3913407962113 0 0 TRUE GranulicatellaGranulicatella adiacens_paradiacens (SPP5) -0.818985908930509 1.38476401756871 -0.591426335852109 0 0 TRUE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP6) -0.144695512200028 0.880580392393479 -0.164318344412297 0 0 TRUE