GroupStatic Day 3 LR...1 GroupStatic Day 3 LR...2 GroupStatic Day 3 LR...3 GroupStatic Day 3 LR...4 GroupStatic Day 3 LR...5 GroupStatic Day 3 LR...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Prevotella oris (SP1) -1.64314449037969 1.44380889273682 -1.13806231464957 0.255094462796771 1 FALSE Peptostreptococcus stomatis (SP10) 7.76838098683526 0.305422020119389 25.4349080128492 0 0 TRUE Leptotrichia sp._HMT_392 (SP103) -1.73070110708326 1.45518978838584 -1.18933016222099 0 0 TRUE Peptidiphaga sp._HMT_183 (SP105) -1.78366430044907 1.4889012616334 -1.19797353015358 0 0 TRUE Leptotrichia hofstadii (SP106) 0.318914586560533 1.52114643364995 0.209654100029874 0 0 TRUE Leptotrichia sp._HMT_212 (SP108) 0.372670635759241 1.42092813676159 0.262272683690103 0 0 TRUE Streptococcus sp._str._C300 (SP11) 3.63949743627249 0.342394353163582 10.6295486553591 2.17160875445154e-26 1.65042265338317e-24 TRUE Actinomyces odontolyticus (SP110) 0.582206855566697 1.30729615712628 0.445351921516019 0 0 TRUE Leptotrichia sp._HMT_223 (SP113) -1.37724259084199 1.3079122376831 -1.05300841383799 0 0 TRUE Selenomonas sp._HMT_137 (SP118) 0.609322068718016 0.994029746656627 0.61298172491059 0 0 TRUE Selenomonas sp._HMT_138 (SP119) 0.289517015882046 1.25472739975424 0.230740968866028 0 0 TRUE Granulicatella adiacens (SP12) -2.51524870707345 0.231351617246164 -10.871973738559 0 0 TRUE Ottowia sp._HMT_894 (SP122) 0.651419977159447 1.19549239501175 0.54489679723395 0 0 TRUE Actinomyces sp._HMT_175 (SP124) 0.533812852285199 1.29050950650995 0.413645036779962 0 0 TRUE Fusobacterium nucleatum_ss_polymorphum (SP13) 2.0525781119018 0.39933783632852 5.13995400679545 2.74805726385972e-07 1.73127607623162e-05 TRUE Parvimonas micra (SP14) -0.261779542452932 0.849675490089729 -0.308093555135134 0 0 TRUE Capnocytophaga sputigena (SP15) 6.28545556976724 0.253219426942677 24.8221696323091 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP16) -1.58014037408246 1.39254040223989 -1.13471779457229 0 0 TRUE Prevotella nanceiensis (SP17) 2.84818699322501 0.816462306349191 3.4884488494768 0 0 TRUE Capnocytophaga sp._HMT_380 (SP18) -2.0003276728386 0.262729955288122 -7.61362620659281 0 0 TRUE Capnocytophaga gingivalis (SP2) -4.10283720183733 0.22660431345736 -18.1057330252867 0 0 TRUE Leptotrichia sp._HMT_225 (SP20) -2.62146580999509 0.186354086810881 -14.0671227277964 0 0 TRUE Kingella oralis (SP21) -0.726866295203112 1.11207162453982 -0.65361464060725 0 0 TRUE Capnocytophaga granulosa (SP22) 0.208511807393308 1.81287023575355 0.11501750278703 0.908431248895065 1 FALSE Solobacterium moorei (SP23) 8.52146498069829 0.965075137294142 8.82984614502721 1.04819807630298e-18 7.65184595701178e-17 TRUE Streptococcus cristatus (SP24) -2.79216896886618 0.421325529094859 -6.6271060641985 0 0 TRUE Selenomonas sp._Oral_Taxon_E83 (SP25) -2.57578376510671 0.166508623937421 -15.4693715208094 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP26) -1.61037013102992 1.46931674812206 -1.09599930245683 0 0 TRUE Porphyromonas sp._Oral_Taxon_B43 (SP27) 4.41717128665769 1.05486271778767 4.1874371064338 0 0 TRUE Leptotrichia wadei (SP28) -4.03088601007553 0.223095296306677 -18.0680008803704 0 0 TRUE Streptococcus mitis (SP29) -3.51510841874431 0.259350851214107 -13.5534871094077 0 0 TRUE Veillonella parvula (SP3) 2.01942972836036 0.500807460870237 4.03234753102771 5.52224421008731e-05 0.00325812408395152 TRUE Streptococcus sp._Oral_Taxon_71 (SP30) 3.98608124221301 0.529336092021463 7.53034093517165 5.06080074232276e-14 3.44134450477948e-12 TRUE Granulicatella paradiacens (SP31) -1.58416945423707 1.45596325945013 -1.08805592720476 0 0 TRUE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP32) 0.638839867831831 0.969979621686326 0.658611638377719 0 0 TRUE Streptococcus vestibularis (SP33) 3.82461605127362 1.60284418382946 2.38614338802165 0 0 TRUE Alloprevotella tannerae (SP34) 0.755972496777794 0.874573310526562 0.864390083345488 0 0 TRUE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP35) 4.74174034563679 1.18011375646214 4.01803666779722 0 0 TRUE Fusobacterium periodonticum (SP36) 4.03936991527043 1.70305248263345 2.37184112437 0 0 TRUE Streptococcus oralis (SP37) 3.42023319415708 0.401806541519441 8.51213915339304 1.70753481641226e-17 1.21234971965271e-15 TRUE Prevotella sp._HMT_300 (SP38) -1.2204172106831 1.24382703495227 -0.981179196454696 0 0 TRUE Streptococcus oralis_subsp._tigurinus_clade_070 (SP39) 3.94855830092673 0.927524812923121 4.25709182753045 0 0 TRUE Veillonella atypica (SP4) 3.74768057658703 1.46643186712631 2.55564589163707 0 0 TRUE Capnocytophaga ochracea (SP40) -3.13401020555179 0.201454515904175 -15.5569121470701 0 0 TRUE Prevotella melaninogenica (SP41) -1.36100471722031 1.40008676042679 -0.972085984732432 0 0 TRUE Fusobacterium canifelinum (SP42) 3.16300752950529 1.06823373087103 2.96096953138355 0 0 TRUE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP43) -2.7491157796548 0.219918210124767 -12.5006282021627 0 0 TRUE Leptotrichia sp._HMT_215 (SP45) -1.49705153033454 1.38789045054121 -1.07865251882868 0 0 TRUE Actinomyces sp._HMT_171 (SP46) -1.18007499988236 1.23136010381941 -0.958350848157272 0 0 TRUE Streptococcus intermedius (SP47) 0.699613720096482 1.15660613184131 0.604885017324525 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP48) -1.77597317664229 0.813275533815497 -2.18372876448192 0.0289821848022329 1 FALSE Dialister invisus (SP49) -3.02090319182317 0.374125072651957 -8.07458096943282 0 0 TRUE Capnocytophaga endodontalis (SP5) -1.60353386100416 1.46147894890271 -1.09719942405473 0 0 TRUE Porphyromonas catoniae (SP50) 4.36075084895152 1.27900543148077 3.40948579389758 0.000650854675649163 0.0344952978094056 TRUE Neisseria elongata (SP51) -1.07956563980396 1.26989966974418 -0.850118844444957 0 0 TRUE Capnocytophaga sp._HMT_864 (SP52) -0.646114996030902 1.12536899920664 -0.57413612467235 0 0 TRUE Arachnia propionica (SP53) -0.155369399057363 1.38702578735704 -0.112016229599752 0.910810538200231 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP54) -2.9066505833034 0.210939900642179 -13.7795200170972 0 0 TRUE Lautropia mirabilis (SP55) -3.11250666161345 0.19180425551019 -16.2275161900571 0 0 TRUE Haemophilus parainfluenzae (SP58) 0.82383881519154 1.05653878633922 0.77975255224282 0 0 TRUE Leptotrichia buccalis (SP59) -3.73095853502368 0.189670741692689 -19.6707120019001 0 0 TRUE Neisseria flavescens|subflava (SP6) 8.40034678121666 0.614860691967388 13.6621951784523 0 0 TRUE Campylobacter showae (SP60) 0.520566076068695 1.06635979514113 0.488171139272743 0 0 TRUE Selenomonas noxia (SP61) -1.81143921572204 1.54207642299883 -1.17467538489395 0 0 TRUE Capnocytophaga leadbetteri (SP62) -3.63701237418393 0.2549271406924 -14.2668699939346 0 0 TRUE Prevotella intermedia (SP63) 7.52172579442217 0.304679069887124 24.6873728386029 0 0 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP65) 1.24557996149451 0.214501220082917 5.80686655774274 6.36528269479648e-09 4.13743375161771e-07 TRUE Campylobacter concisus (SP66) -0.899350235668173 1.18670554261478 -0.757854584285964 0 0 TRUE Aggregatibacter segnis (SP67) -1.28404951808427 1.33593689271665 -0.961160310105021 0 0 TRUE Streptococcus cristatus_clade_578 (SP68) 2.82348433584044 0.723958097062173 3.9000659669367 0 0 TRUE Porphyromonas pasteri (SP69) -3.21196205210613 0.366902183495658 -8.75427347284822 0 0 TRUE Gemella morbillorum (SP7) 3.95214749947801 0.368378865285553 10.7284860015366 7.48118189100448e-27 5.76051005607345e-25 TRUE Campylobacter gracilis (SP70) 0.638839867831831 0.969979621686326 0.658611638377719 0 0 TRUE Tannerella sp._HMT_286 (SP71) -3.07133968517622 0.158631259615082 -19.3615034806432 0 0 TRUE Selenomonas sputigena (SP72) -3.08969987882475 0.211022791723637 -14.6415458424563 0 0 TRUE Eikenella corrodens (SP73) 0.707104672047169 1.15056484658596 0.61457176807143 0 0 TRUE Bergeyella sp._HMT_322 (SP74) -2.22526035346918 0.205709199308599 -10.8175052984914 0 0 TRUE Prevotella maculosa (SP75) -2.17108737696993 0.153187849436899 -14.1727126854421 0 0 TRUE Streptococcus sanguinis (SP76) 0.28735951104684 1.25648676875157 0.228700785550139 0 0 TRUE Catonella morbi (SP77) 0.773994903867886 0.859898659183584 0.900100140408106 0 0 TRUE Rothia dentocariosa (SP78) -3.05139100972479 0.214763345720695 -14.2081554908033 0 0 TRUE Prevotella denticola (SP79) -3.69120507863475 0.209206703127376 -17.6438184028327 0 0 TRUE Fusobacterium nucleatum (SP8) 2.34899411677306 0.314038819012537 7.4799482565857 7.43518800358558e-14 4.98157596240234e-12 TRUE Cardiobacterium valvarum (SP80) -2.08095171109331 0.14536031824565 -14.3158169726668 0 0 TRUE Actinomyces sp._HMT_169 (SP81) 0.404718589276874 1.16079485554359 0.348656429121878 0 0 TRUE Leptotrichia sp._AF189244.1 (SP82) 0.18140382811678 1.57598520561943 0.115105032375911 0 0 TRUE Prevotella sp._HMT_317 (SP84) -4.36129724618007 0.23583103067069 -18.4933137669661 0 0 TRUE Prevotella saccharolytica (SP87) 3.17214052090133 1.07549998225622 2.94945659994036 0 0 TRUE Actinomyces naeslundii (SP89) -1.57459728842529 1.41611989933138 -1.11190958418756 0 0 TRUE Porphyromonas endodontalis (SP9) 6.16580968538998 1.21002962273272 5.09558573571542 3.47664633751198e-07 2.15552072925743e-05 TRUE Selenomonas sp._Oral_Taxon_137 (SP90) -2.8918348390143 0.315397843430124 -9.16884785122187 0 0 TRUE Alloprevotella sp._HMT_473 (SP91) 2.82348433584044 0.723958097062173 3.9000659669367 0 0 TRUE Prevotella sp._HMT_292 (SP92) 0.296074604414948 1.53971275552171 0.192292103415501 0 0 TRUE Selenomonas sp._Oral_Taxon_G00 (SP94) 0.207433307107259 1.61178673883457 0.128697737801992 0 0 TRUE Selenomonas artemidis (SP96) -1.05960662711098 0.11119031860599 -9.52966625507892 0 0 TRUE Actinomyces sp._HMT_448_nov_96.718% (SPN10) -0.420511408950818 0.913786878948129 -0.460185431240678 0 0 TRUE Bergeyella zoohelcum_nov_92.673% (SPN11) 8.69989182932574 0.236326607825969 36.8130017578568 0 0 TRUE Bulleidia extructa_nov_96.008% (SPN12) 3.19812770139124 0.564860562552709 5.66180029800329 0 0 TRUE Gemella morbillorum_nov_93.519% (SPN13) 3.26577464939013 1.15085681460656 2.83768980462318 0 0 TRUE Prevotella sp._HMT_305_nov_93.688% (SPN2) 4.91434656538911 1.25162504488229 3.92637282665696 0 0 TRUE Leptotrichia sp._HMT_215_nov_97.292% (SPN9) 5.89173619424732 0.278543649148498 21.1519315276375 0 0 TRUE Streptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP1) -2.20111223511341 0.157612445053447 -13.965345403829 0 0 TRUE Atopobium_Lancefieldella parvula_parvulum (SPP2) -0.134804876055583 0.868999850856874 -0.155126466273451 0 0 TRUE Granulicatella adiacens_paradiacens (SPP5) -0.809095272786064 1.36795036304948 -0.59146537377453 0 0 TRUE