GroupDynamic Day 3 MR...1 GroupDynamic Day 3 MR...2 GroupDynamic Day 3 MR...3 GroupDynamic Day 3 MR...4 GroupDynamic Day 3 MR...5 GroupDynamic Day 3 MR...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Prevotella oris (SP1) -1.63398218843218 1.47158412417829 -1.11035595015309 0.266845672054922 1 FALSE Peptostreptococcus stomatis (SP10) 7.89958657259757 0.279535004839782 28.2597400533979 0 0 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP102) 3.31251019590425 1.135283528923 2.91778230857159 0 0 TRUE Leptotrichia sp._HMT_392 (SP103) -1.68396556056914 1.44282783211195 -1.16712855344925 0 0 TRUE Peptidiphaga sp._HMT_183 (SP105) -1.73692875393495 1.47673068238316 -1.17619873051725 0 0 TRUE Leptotrichia hofstadii (SP106) 0.365650133074654 1.51327968927665 0.241627595787952 0 0 TRUE Leptotrichia sp._HMT_212 (SP108) 0.419406182273362 1.41200065262924 0.297029736843534 0 0 TRUE Streptococcus sp._str._C300 (SP11) 3.88837938630573 0.366834274494271 10.5998257432907 2.98535959159336e-26 2.14945890594722e-24 TRUE Actinomyces odontolyticus (SP110) 0.628942402080821 1.29937257167486 0.484035461261223 0 0 TRUE Leptotrichia sp._HMT_223 (SP113) -1.33050704432786 1.29542777572176 -1.02707929323699 0 0 TRUE Selenomonas sp._HMT_137 (SP118) 0.656057615232138 0.980077592282622 0.669393546386634 0 0 TRUE Selenomonas sp._HMT_138 (SP119) 0.336252562396167 1.24095074931271 0.270963664418107 0 0 TRUE Granulicatella adiacens (SP12) -2.46851316055933 0.214101948845281 -11.5296155587224 0 0 TRUE Ottowia sp._HMT_894 (SP122) 0.698155523673568 1.18652452481209 0.588403786920574 0 0 TRUE Actinomyces sp._HMT_175 (SP124) 0.580548398799321 1.28156053457883 0.453001152216434 0 0 TRUE Fusobacterium nucleatum_ss_polymorphum (SP13) 1.89679916718525 0.435851431110142 4.35193974780347 1.34938349126394e-05 0.000836617764583641 TRUE Parvimonas micra (SP14) -0.215043995938811 0.836719967906319 -0.257008323199103 0 0 TRUE Capnocytophaga sputigena (SP15) 7.24145097740703 0.231826351108704 31.2365308894997 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP16) -1.53340482756834 1.38013294466432 -1.11105588305575 0 0 TRUE Prevotella nanceiensis (SP17) 3.12597159992578 0.93849418834541 3.33083746148386 0 0 TRUE Capnocytophaga sp._HMT_380 (SP18) -1.95359212632448 0.252491940836961 -7.73724547345434 0 0 TRUE Capnocytophaga gingivalis (SP2) -3.01093691668016 0.922746893992446 -3.26301495706233 0.00110233701887191 0.0628332100756989 FALSE Leptotrichia sp._HMT_225 (SP20) -2.57473026348097 0.173741346091492 -14.8193295459166 0 0 TRUE Kingella oralis (SP21) -0.68013074868899 1.10096620309391 -0.617758062670499 0 0 TRUE Capnocytophaga granulosa (SP22) -1.14130422676804 1.36225603366463 -0.837804493842322 0 0 TRUE Solobacterium moorei (SP23) 8.66463764982377 0.960948140349177 9.01675885097746 1.9373627448609e-19 1.35615392140263e-17 TRUE Streptococcus cristatus (SP24) -1.33893085396002 1.25845999118284 -1.06394391823418 0.287354105946269 1 FALSE Selenomonas sp._Oral_Taxon_E83 (SP25) -2.52904821859259 0.152686190421433 -16.5636997793455 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP26) -1.5636345845158 1.45826840737929 -1.07225430970274 0 0 TRUE Leptotrichia wadei (SP28) -3.98415046356141 0.211829392735555 -18.8082985657008 0 0 TRUE Streptococcus mitis (SP29) -3.46837287223018 0.248224440907133 -13.9727291138418 0 0 TRUE Veillonella parvula (SP3) 2.56416178855855 0.394238411456006 6.50408918575071 7.81655149349018e-11 5.08075847076862e-09 TRUE Streptococcus sp._Oral_Taxon_71 (SP30) 3.6443262756822 0.460441083845817 7.91485904177599 2.47533378315694e-15 1.65847363471515e-13 TRUE Granulicatella paradiacens (SP31) -1.53743390772295 1.44485347316158 -1.06407600236361 0 0 TRUE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP32) 0.685575414345953 0.956006271979217 0.717124389703645 0 0 TRUE Alloprevotella tannerae (SP34) 0.802708043291916 0.860503714830225 0.932835070270775 0 0 TRUE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP35) 3.31251019590425 1.0882308894565 3.04394060855839 0 0 TRUE Fusobacterium periodonticum (SP36) 8.43748376662218 0.231578827708464 36.4346078184841 0 0 TRUE Streptococcus oralis (SP37) 2.98583512461191 0.370113192157461 8.06735665704567 7.18364684287373e-16 4.88487985315413e-14 TRUE Prevotella sp._HMT_300 (SP38) -1.17368166416898 1.23089959559473 -0.953515354436278 0 0 TRUE Veillonella atypica (SP4) 7.63747080854154 0.293003216400593 26.0661671307376 0 0 TRUE Capnocytophaga ochracea (SP40) -0.293254486562748 1.17493343026284 -0.249592427119165 0.802902555560462 1 FALSE Prevotella melaninogenica (SP41) -1.31426917070619 1.38858379495143 -0.946481714308185 0 0 TRUE Fusobacterium canifelinum (SP42) 3.29145056203041 1.11832278116382 2.94320264012242 0 0 TRUE Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP43) -2.70238023314068 0.208153530032738 -12.9826298536261 0 0 TRUE Leptotrichia sp._HMT_215 (SP45) -1.45031598382042 1.37587316000927 -1.05410587688959 0 0 TRUE Actinomyces sp._HMT_171 (SP46) -1.13333945336823 1.21893367533279 -0.929779426316047 0 0 TRUE Streptococcus intermedius (SP47) 0.746349266610604 1.14762954069403 0.650339887695159 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP48) -2.60892340666659 0.205426668201053 -12.7000229790672 0 0 TRUE Dialister invisus (SP49) -2.97416764530904 0.36423071021912 -8.16561471030214 0 0 TRUE Capnocytophaga endodontalis (SP5) 0.521338594082754 1.70673238144559 0.305460070805702 0.760015776497797 1 FALSE Porphyromonas catoniae (SP50) 2.65068960434444 1.98547920344655 1.33503770764416 0.181864005367062 1 FALSE Neisseria elongata (SP51) -1.03283009328983 1.25907382930532 -0.820309396677468 0 0 TRUE Capnocytophaga sp._HMT_864 (SP52) -0.599379449516781 1.11487463065354 -0.537620493853579 0 0 TRUE Arachnia propionica (SP53) -1.03283009328984 1.1739933930848 -0.879758011734595 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP54) -2.85991503678928 0.197854196851645 -14.454659452757 0 0 TRUE Lautropia mirabilis (SP55) -3.06577111509933 0.178428651615262 -17.182056173971 0 0 TRUE Haemophilus parainfluenzae (SP58) 0.870574361705662 1.0475364699809 0.831068308028963 0 0 TRUE Leptotrichia buccalis (SP59) -3.68422298850956 0.177226930434247 -20.788166784147 0 0 TRUE Neisseria flavescens|subflava (SP6) 9.86552806504131 0.240870875447771 40.9577457079509 0 0 TRUE Campylobacter showae (SP60) 0.567301622582816 1.05246534733869 0.539021663770042 0 0 TRUE Selenomonas noxia (SP61) -1.76470366920792 1.53058913095213 -1.15295714148326 0 0 TRUE Capnocytophaga leadbetteri (SP62) -3.59027682766981 0.244438433293262 -14.6878573033661 0 0 TRUE Prevotella intermedia (SP63) 7.80812323925406 0.363083667260259 21.5050247183308 0 0 TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP65) -0.722343137608397 1.05429219258569 -0.685145107483746 0.493252358529382 1 FALSE Campylobacter concisus (SP66) -0.852614689154051 1.17570999091664 -0.725191327573319 0 0 TRUE Aggregatibacter segnis (SP67) -1.23731397157015 1.32484543563437 -0.933930810561077 0 0 TRUE Streptococcus cristatus_clade_578 (SP68) 3.83367713498661 0.897181502849804 4.27302293104498 0 0 TRUE Porphyromonas pasteri (SP69) 0.0432487355617697 1.40011651638503 0.0308893831732189 0.975357756884777 1 FALSE Gemella morbillorum (SP7) 2.1135688127148 0.505192786624079 4.18368763108951 2.86818152090062e-05 0.00169222709733136 TRUE Campylobacter gracilis (SP70) 0.685575414345953 0.956006271979217 0.717124389703645 0 0 TRUE Tannerella sp._HMT_286 (SP71) -3.0246041386621 0.144327295454362 -20.9565635463495 0 0 TRUE Selenomonas sputigena (SP72) -3.04296433231063 0.197777846209289 -15.3857693904228 0 0 TRUE Eikenella corrodens (SP73) 0.75384021856129 1.14158684224781 0.660344172395121 0 0 TRUE Bergeyella sp._HMT_322 (SP74) -2.17852480695506 0.193551204665119 -11.2555476506816 0 0 TRUE Prevotella maculosa (SP75) -2.12435183045581 0.138212970101261 -15.3701337066949 0 0 TRUE Streptococcus sanguinis (SP76) 0.334095057560962 1.24271104535641 0.268843717780863 0 0 TRUE Catonella morbi (SP77) 0.820730450382007 0.845812250168163 0.970345901491532 0 0 TRUE Rothia dentocariosa (SP78) -3.00465546321067 0.203019942886084 -14.7998044945595 0 0 TRUE Prevotella denticola (SP79) -3.64446953212062 0.197606093555123 -18.4431029759919 0 0 TRUE Fusobacterium nucleatum (SP8) 1.92569416436246 0.348999577745737 5.51775499787402 3.43357659645755e-08 2.19748902173283e-06 TRUE Cardiobacterium valvarum (SP80) -2.03421616457919 0.129558722544514 -15.7011131680484 0 0 TRUE Actinomyces sp._HMT_169 (SP81) 0.451454135790996 1.14696445158401 0.393607783717722 0 0 TRUE Leptotrichia sp._AF189244.1 (SP82) 0.228139374630902 1.56707830165598 0.145582626209437 0 0 TRUE Prevotella sp._HMT_317 (SP84) -4.31456169966595 0.224733105553789 -19.1986031120514 0 0 TRUE Actinomyces naeslundii (SP89) -1.52786174191116 1.40407369880659 -1.0881634939888 0 0 TRUE Porphyromonas endodontalis (SP9) 5.2821465915326 1.23336953578013 4.28269584929511 1.84642486788846e-05 0.00112631916941196 TRUE Selenomonas sp._Oral_Taxon_137 (SP90) -2.84509929250018 0.30590934878796 -9.30046532991789 0 0 TRUE Prevotella sp._HMT_292 (SP92) 0.342810150929068 1.53185015243555 0.223788306176045 0 0 TRUE Selenomonas sp._Oral_Taxon_G00 (SP94) 0.254168853621382 1.6039392516498 0.158465386616074 0 0 TRUE Selenomonas artemidis (SP96) -1.01287108059685 0.0882770044667334 -11.4737817250986 0 0 TRUE Lachnoanaerobaculum gingivalis (SP97) 3.26112663596183 1.09391424744597 2.98115381857014 0 0 TRUE Lachnoanaerobaculum orale (SP99) 3.51885659870633 1.25461425760297 2.8047318746635 0 0 TRUE Actinomyces sp._HMT_448_nov_96.718% (SPN10) -0.373775862436696 0.900787234866334 -0.414943560442617 0 0 TRUE Bergeyella zoohelcum_nov_92.673% (SPN11) 8.4493901555052 0.263254444680613 32.095906930484 0 0 TRUE Bulleidia extructa_nov_96.008% (SPN12) 3.24486324790536 0.609566674974917 5.32322940396779 0 0 TRUE Prevotella sp._HMT_305_nov_93.688% (SPN2) 7.0559588620087 0.299658657262647 23.5466544716718 0 0 TRUE Leptotrichia sp._HMT_215_nov_97.292% (SPN9) 5.74058781264327 0.257541078204593 22.2899890482049 0 0 TRUE Streptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP1) -2.15437668859929 0.140997327383054 -15.279556914908 0 0 TRUE Atopobium_Lancefieldella parvula_parvulum (SPP2) -0.0880693295414612 0.857705672143132 -0.102680129561699 0 0 TRUE Lachnoanaerobaculum gingivalis_umeaense (SPP3) 3.44538991025018 1.23363180438622 2.79288349894999 0 0 TRUE Granulicatella adiacens_paradiacens (SPP5) -0.762359726271943 1.36076171537973 -0.560244837619642 0 0 TRUE