TreatmentBaseline PDI...1 TreatmentBaseline PDI...2 TreatmentBaseline PDI...3 TreatmentBaseline PDI...4 TreatmentBaseline PDI...5 TreatmentBaseline PDI...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Corynebacterium matruchotii (SP1) 1.00594256045781 0.560853164432998 1.7935934470028 0.0728780832412525 1 FALSE Actinomyces sp._HMT_175 (SP10) 0.114832633968434 0.750324340443537 0.153043994148655 0.87836358161444 1 FALSE Streptococcus sanguinis (SP100) -0.119740507584367 0.823499597725531 -0.14540445182376 0.884391549972774 1 FALSE Leptotrichia sp._HMT_215 (SP103) 0.886901981194146 0.619415051748049 1.43183795532773 0.15219020207737 1 FALSE Megasphaera micronuciformis (SP104) 0.175617924700532 0.375757016439349 0.46737097916275 0.640234481979319 1 FALSE Cardiobacterium valvarum (SP105) 0.419893881921387 0.586827525339212 0.715532015439578 0.474280365321344 1 FALSE Schaalia sp._HMT_180 (SP106) 0.169951213714499 0.659493736917857 0.257699511308123 0.796638823289695 1 FALSE Fusobacterium periodonticum (SP108) -0.252934085778546 0.590647508100328 -0.428231868093452 0.668482316829609 1 FALSE Streptococcus parasanguinis_clade_411 (SP109) -1.51455539822503 0.585543056483902 -2.58658245786349 0.0096932974317222 1 FALSE Neisseria subflava (SP11) -1.02085989585999 0.548062904883346 -1.86266920596874 0.0625088209403102 1 FALSE Capnocytophaga leadbetteri (SP110) 0.481426471534411 0.750439190622809 0.641526292270081 0.521180804214 1 FALSE Bergeyella sp._HMT_322 (SP111) -0.134056428722602 0.654249726287428 -0.204901008493059 0.837649467272959 1 FALSE Prevotella marshii (SP112) -0.227298052034517 0.333895126410505 -0.680746839518306 0.496031692819712 1 FALSE Schaalia meyeri (SP113) -1.14533700653386 0.552459744053217 -2.07315920999221 0.0381574651140467 1 FALSE Leptotrichia sp._HMT_392 (SP114) 1.2026401843361 0.660976915056704 1.81948893666419 0.0688368691658414 1 FALSE Arachnia propionica (SP115) 0.285289713220853 0.680273837195933 0.419374812938284 0.674942228627876 1 FALSE Selenomonas dianae (SP116) -0.745090914689891 0.462134320126904 -1.61228214880316 0.106900556056163 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP117) 0.522400381053666 0.479717926569431 1.08897406605058 0.276165322243698 1 FALSE Capnocytophaga granulosa (SP118) 0.29057707168144 0.569302272313057 0.510409119747292 0.609764869053321 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP119) -0.359921612538067 0.525305854431943 -0.685165812452787 0.493239294490043 1 FALSE Catonella morbi (SP12) -0.675108569251729 0.668409988517709 -1.01002166462065 0.312484910588749 1 FALSE Fusobacterium sp._HMT_204 (SP120) -0.0727153093292614 0.482589066613205 -0.150677490146172 0.880230130739846 1 FALSE Streptococcus gordonii (SP121) -0.981731629729191 0.731849783649495 -1.34143871005006 0.179778056487664 1 FALSE Neisseria oralis (SP122) -0.0298882189994925 0.605617302435124 -0.0493516596690932 0.960639051179572 1 FALSE Fretibacterium fastidiosum (SP124) -0.505156881412901 0.641605014920485 -0.787333124999819 0.43108688345882 1 FALSE Streptococcus constellatus (SP125) -0.793371755138998 0.461881215896174 -1.71769651554165 0.0858519852650787 1 FALSE Alloprevotella sp._HMT_473 (SP126) -0.997442221277016 0.541990565638514 -1.84033133510717 0.0657196076362001 1 FALSE Prevotella saccharolytica (SP127) 0.106838998526158 0.577384602604596 0.185039569888433 0.853197999166622 1 FALSE Lachnoanaerobaculum orale (SP128) 0.375024172350996 0.604881441321908 0.619996162440393 0.535260313467114 1 FALSE Lancefieldella rimae (SP13) 0.135637927632232 0.614156946058779 0.220852224342099 0.825207498275744 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP131) 0.95251707269537 0.511880921511101 1.86081768760493 0.0627699268181868 1 FALSE Streptococcus salivarius (SP132) -0.709728112305653 0.539581618454687 -1.31533041162197 0.188398881616598 1 FALSE Prevotella oulorum (SP133) 0.877947119376955 0.59935725740702 1.46481436326506 0.142971572040556 1 FALSE Treponema sp._HMT_237 (SP134) -0.409395061287406 0.606379747164124 -0.675146330664962 0.4995828006344 1 FALSE Porphyromonas gingivalis (SP135) -0.641886106186201 0.659253889744878 -0.973655394638023 0.330227671763128 1 FALSE Capnocytophaga sp._HMT_863 (SP136) -0.11387010178473 0.421552065899916 -0.270121085853638 0.787067100713477 1 FALSE Corynebacterium durum (SP138) -0.56265766634071 0.771452311808161 -0.729348603573345 0.465788448462786 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP139) 0.251539087905421 0.674983808076037 0.3726594399685 0.709401927542356 1 FALSE Leptotrichia buccalis (SP14) 0.160014847318372 0.764710999435542 0.209248784751997 0.834254030526905 1 FALSE Arachnia rubra (SP140) -1.38423003119842 0.58439206301672 -2.36866672016867 0.0178523323183372 1 FALSE Porphyromonas sp._HMT_275 (SP141) -0.985039333302991 0.555024492495259 -1.7747673240049 0.0759363137729334 1 FALSE Leptotrichia sp._HMT_417 (SP142) 0.204513648267478 0.453321547605936 0.451144776478302 0.651885207760622 1 FALSE Schaalia sp._HMT_877 (SP143) -0.0774918502052284 0.458965285035975 -0.168840330046213 0.865922234902891 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP144) -0.313311603808655 0.688354917253803 -0.455159970467871 0.648994156369268 1 FALSE Anaeroglobus geminatus (SP145) -0.452922242911433 0.527754355958498 -0.858206545901158 0.390778422122425 1 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP147) -0.433399269002231 0.525183252222001 -0.825234367563245 0.409238545333641 1 FALSE Actinomyces dentalis (SP148) 0.481578157564135 0.84869347352389 0.567434736554008 0.570418855242244 1 FALSE Leptotrichia trevisanii (SP149) 0.349231860545551 0.488443427700542 0.71498937387619 0.474615609349339 1 FALSE Actinomyces johnsonii (SP15) 0.0809890480494124 0.619565770016725 0.130719048676989 0.89599756298098 1 FALSE Aggregatibacter aphrophilus (SP150) 0.603303831019361 0.609853105902893 0.989260897714319 0.322535510123518 1 FALSE Schaalia georgiae (SP152) -0.0318020909679052 0.566820982756597 -0.0561060580595365 0.955257317909071 1 FALSE Aggregatibacter sp._HMT_513 (SP153) -0.641184384784804 0.565291585531142 -1.13425425248875 0.256687912739508 1 FALSE Capnocytophaga sp._HMT_336 (SP156) 1.00869812932366 0.573461681857335 1.75896343423798 0.0785837195056911 1 FALSE Fretibacterium sp._HMT_359 (SP157) -0.757532131657653 0.392644622325943 -1.92930728853536 0.053692725457113 1 FALSE Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP159) -0.403647882018774 0.490247077491823 -0.8233560189362 0.410305565976096 1 FALSE Streptococcus anginosus (SP16) 0.41059102669366 0.648967478189025 0.632683517268745 0.526940335649798 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP160) -1.00854590758206 0.516986121672134 -1.95081814637505 0.0510786824138232 1 FALSE Granulicatella adiacens (SP161) -1.09114050289759 0.768428388767989 -1.41996381035193 0.155618217153084 1 FALSE Tannerella sp._HMT_286 (SP162) 0.141064916951213 0.527062918095652 0.26764341050761 0.788973812800825 1 FALSE Treponema sp._HMT_238 (SP163) -0.830552959000762 0.471240243821996 -1.76248308562223 0.0779877117037603 1 FALSE Leptotrichia hofstadii (SP164) 0.0524702507278652 0.577759497580436 0.0908167688244022 0.927638185518046 1 FALSE Streptococcus intermedius (SP165) -0.356141422662555 0.703087536149825 -0.506539234947641 0.61247815364991 1 FALSE Schaalia sp._HMT_178 (SP166) -0.408293947528421 0.609456894289742 -0.669930804547293 0.502901901534282 1 FALSE Olsenella sp._HMT_807 (SP168) 0.423741122248935 0.735510270960382 0.57611856554449 0.564535043410739 1 FALSE Haemophilus parainfluenzae (SP17) -0.831149696391219 0.873586417799184 -0.951422411631725 0.341389987851327 1 FALSE Capnocytophaga sp._HMT_332 (SP171) -0.0685996468773253 0.486749379427143 -0.140934225654402 0.887921903822157 1 FALSE Alloprevotella sp._HMT_912 (SP172) -0.222862617468332 0.367047292961287 -0.607176845442196 0.543733556778492 1 FALSE Mogibacterium vescum (SP173) 0.40200620140256 0.436575827445887 0.920816445002073 0.357146267681826 1 FALSE Actinomyces sp._HMT_897 (SP174) 0.312982811583089 0.742700677963902 0.421411775792536 0.673454421744051 1 FALSE Prevotella pleuritidis (SP175) -1.10905120840541 0.453032035172817 -2.44806354142779 0.0143626323903013 1 FALSE Treponema sp._HMT_257 (SP176) -0.37467057905331 0.401256522154423 -0.933743274854778 0.350436336551159 1 FALSE Actinomyces sp._HMT_525 (SP177) -0.22068699852513 0.744290969112742 -0.296506349913405 0.766843418352928 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_132 (SP178) -0.365494271217462 0.410017160981046 -0.891412131001897 0.372708112085128 1 FALSE Gemella haemolysans (SP179) -0.967279492834546 0.584646283226346 -1.65446958372275 0.0980321384301489 1 FALSE Solobacterium moorei (SP18) 0.134992226686582 0.553106339140759 0.244061977116896 0.807182820047362 1 FALSE Clostridiales_[F-1][G-1] bacterium_HMT_093 (SP180) -0.396862051019298 0.406649872124489 -0.975930593426585 0.329098860189902 1 FALSE Aggregatibacter segnis (SP181) -1.32381611432599 0.585125688537712 -2.26244743695041 0.0236697729075627 1 FALSE Capnocytophaga ochracea (SP183) 1.20569202941714 0.54522911063317 2.211349331691 0.0270116556567229 1 FALSE Peptococcus sp._HMT_167 (SP184) -0.574039572026019 0.504626887223781 -1.13755248988835 0.25530739479752 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP185) -0.824486133845394 0.494825332961757 -1.66621649888146 0.0956703009560795 1 FALSE Fretibacterium sp._HMT_362 (SP188) -0.618173958740284 0.556213846235153 -1.1113962065571 0.266397844457464 1 FALSE Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP189) -0.790814604955034 0.438014312641132 -1.80545379941261 0.0710036989299309 1 FALSE Capnocytophaga sputigena (SP19) 0.756990006978922 0.743339973914162 1.01836310913415 0.308505427093328 1 FALSE Lachnoanaerobaculum saburreum (SP192) 0.0253763358193686 0.690434103200451 0.0367541749483965 0.9706810124326 1 FALSE Prevotella sp._HMT_526 (SP193) 0.0853390666408699 0.444843605761006 0.191840605407553 0.847867063137204 1 FALSE Rothia dentocariosa (SP195) -1.58046371750563 0.743407321557075 -2.12597276308139 0.0335055274769221 1 FALSE Neisseria bacilliformis (SP196) -0.131661726226511 0.408952309161041 -0.321948851436034 0.747491443683155 1 FALSE Alloprevotella sp._HMT_913 (SP199) 0.13206899537577 0.392364067556639 0.336598089111984 0.736419896900427 1 FALSE Prevotella intermedia (SP2) -1.22862805615177 0.644353770798132 -1.90676009334116 0.0565516612241576 1 FALSE Campylobacter gracilis (SP20) 0.15719585277702 0.639004770403392 0.246001062993294 0.805681409634638 1 FALSE Aggregatibacter sp._HMT_458 (SP203) -0.683986005335066 0.555443696983195 -1.23142275094673 0.218164792199193 1 FALSE Phocaeicola abscessus (SP205) -0.291915642841318 0.32842957003719 -0.888822656279892 0.374098397620535 1 FALSE Prevotella sp._HMT_314 (SP206) 0.49901632101016 0.483998186057448 1.03102932073991 0.3025270702211 1 FALSE Prevotella oralis (SP209) 0.207736419642848 0.428060587742121 0.485296767774369 0.627465847946619 1 FALSE Actinomyces sp._HMT_169 (SP21) -0.495645716994518 0.949312873002351 -0.522109971422762 0.601593764173688 1 FALSE Porphyromonas sp._HMT_284 (SP210) -0.343947821444148 0.384006161776074 -0.895683079285366 0.370422050018306 1 FALSE Prevotella melaninogenica (SP211) -0.447173837653414 0.675761870177608 -0.661732863879823 0.508142438971513 1 FALSE Treponema socranskii (SP212) 0.238429792688868 0.615025033890162 0.387674939312225 0.698256603718906 1 FALSE Prevotella veroralis (SP213) 0.514220952758633 0.460580740771891 1.11646212539596 0.264224373645786 1 FALSE Peptidiphaga gingivicola (SP214) 0.715038804255137 0.494129861321052 1.44706657141401 0 0 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP216) -0.514880092306151 0.558507576398768 -0.921885600238542 0.356588250974305 1 FALSE Actinomyces massiliensis (SP217) -0.16837291415106 0.802210126048266 -0.209886298718859 0.83375641609726 1 FALSE Selenomonas sp._HMT_892 (SP218) -0.305908147341372 0.417843459829632 -0.732111847499301 0.464100303125279 1 FALSE Prevotella sp._HMT_317 (SP22) 0.214867100580407 0.824477538998539 0.260610011088231 0.794393268674859 1 FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP220) -0.767439712942934 0.613898420053261 -1.25010863014821 0.211259867633424 1 FALSE Peptostreptococcus stomatis (SP221) -0.17716182920157 0.583108742141752 -0.30382296885287 0.761262766806507 1 FALSE Campylobacter showae (SP224) 0.331690076012518 0.667225528066743 0.497118383604979 0.619105571503298 1 FALSE Tannerella forsythia (SP228) -0.961370972530896 0.578069186587914 -1.66307250902862 0.0962979220561717 1 FALSE Selenomonas flueggei (SP230) 0.115630267779555 0.415765982193099 0.278113825401548 0.780924983112268 1 FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP232) 0.305323876052396 0.358105133765965 0.852609603334914 0.393875835250967 1 FALSE Ottowia sp._HMT_894 (SP233) 0.108497128313726 0.580694115086999 0.186840413041677 0.85178575979636 1 FALSE Pseudoramibacter alactolyticus (SP235) -0.538210058513133 0.374862518582912 -1.4357531943917 0.151072582733049 1 FALSE Neisseria mucosa (SP236) 0.257641192327834 0.680264503685938 0.378736786840756 0.704883332923391 1 FALSE Mycoplasma faucium (SP237) -0.331011991402784 0.473944074238181 -0.698419938966118 0.484914610481699 1 FALSE Bacteroidetes_[G-3] bacterium_HMT_280 (SP238) -0.825071374101476 0.338910624767488 -2.43448069728567 0.0149131752498483 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP24) 0.183768038353974 0.673629157734587 0.272802975114653 0.785004672471078 1 FALSE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP242) -0.583198393800211 0.397891955352532 -1.46572049511154 0.142724448299171 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP244) 0.301058692485268 0.459104759431094 0.655751625965125 0.511983945775995 1 FALSE Actinomyces sp._HMT_414 (SP249) 1.09695014756816 0.620800269934799 1.76699367041733 0.0772292883388112 1 FALSE Tannerella serpentiformis (SP25) -0.171831857317971 0.393074456896517 -0.43714836795719 0.662003751647048 1 FALSE Selenomonas sp._HMT_937 (SP250) -0.293735660399043 0.320665637221292 -0.916018513690429 0.359657184649831 1 FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP251) 0.405178819926326 0.436277525987352 0.928718065431755 0.353035215962296 1 FALSE Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 (SP255) 0.127922320392849 0.403376004578354 0.317129226679126 0.751145548903007 1 FALSE Filifactor alocis (SP256) -0.60117470362804 0.617517425633328 -0.973534800271382 0.330287573021485 1 FALSE Capnocytophaga endodontalis (SP257) -1.2412502768277 0.604983639697496 -2.05170883207413 0.0401979678987018 1 FALSE Johnsonella ignava (SP258) -0.832674586168831 0.516033516380899 -1.61360562780618 0.106612995367881 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP259) -0.447582017025524 0.445573909706651 -1.0045067883804 0.3151344008486 1 FALSE Lautropia mirabilis (SP26) 0.183728693791337 0.862755805266097 0.212955615795213 0.831361582024108 1 FALSE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_872 (SP262) -0.0615535897958322 0.400119797058177 -0.15383790116959 0.8777375487231 1 FALSE Bergeyella sp._HMT_900 (SP266) 0.516973842742386 0.439731726162257 1.17565736558119 0.239731821983968 1 FALSE Rothia mucilaginosa (SP267) -1.13654454359161 0.445021558555734 -2.55390895506306 0 0 TRUE Treponema sp._HMT_234 (SP268) -0.219116854072962 0.422385110478068 -0.518760838479746 0.603927530217572 1 FALSE Cardiobacterium hominis (SP27) -0.256138494881905 0.684572692877934 -0.374158212190881 0.708286611572684 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP270) -0.00707686877368191 0.438852353045703 -0.0161258535463405 0.987133988047742 1 FALSE Fusobacterium sp._HMT_203 (SP271) -0.234232168796742 0.436814678786466 -0.536227787599705 0.591801131107568 1 FALSE Prevotella salivae (SP276) 0.708860091755068 0.409038996496137 1.73298902507395 0 0 TRUE Streptococcus oralis_subsp._dentisani_clade_058 (SP277) 0.0153236412840935 0.384562866980571 0.0398469082686231 0.968215178515872 1 FALSE Leptotrichia sp._HMT_212 (SP28) -0.747728281415987 0.69077433736928 -1.08244942083924 0.279052878468684 1 FALSE Mogibacterium timidum (SP280) -0.715203170475865 0.422540521926502 -1.69262622958626 0.0905266351367384 1 FALSE Treponema maltophilum (SP282) -0.0898411862984601 0.455958265385701 -0.197038178971188 0.843797660892741 1 FALSE Peptococcus sp._HMT_168 (SP285) 0.520928356406144 0.370554616712312 1.40580722223353 0 0 TRUE Bacteroidetes_[G-5] bacterium_HMT_511 (SP287) 0.116049869863139 0.451964615417057 0.256767600614159 0.797358182658637 1 FALSE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_871 (SP288) 0.482957311006288 0.432613444926311 1.11637147821088 0.264263156967205 1 FALSE Selenomonas infelix (SP29) -0.133254497702677 0.62677750104319 -0.212602554304984 0.831636978945602 1 FALSE Capnocytophaga sp._HMT_338 (SP290) -0.249063121159167 0.401808407623695 -0.619855424708837 0.535352974937688 1 FALSE Pseudoleptotrichia goodfellowii (SP292) -0.257239121021867 0.483395847802473 -0.532150042643686 0.594622080190239 1 FALSE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP295) -1.04848662020071 0.494006509529048 -2.12241458356544 0.0338029386017748 1 FALSE Bacteroidetes_[G-3] bacterium_HMT_365 (SP296) -0.436162809222036 0.401245214885684 -1.08702307975511 0.277026609901028 1 FALSE Streptococcus mutans (SP3) -1.11196276973515 0.503719920727553 -2.20750207402772 0.0272790022586757 1 FALSE Streptococcus sp._HMT_056 (SP301) 0.393082893892162 0.531010681114443 0.740254213092646 0.45914575778281 1 FALSE Mogibacterium neglectum (SP302) 0.179667487500375 0.487188035502195 0.368784687651809 0.712288218943786 1 FALSE Prevotella pallens (SP306) -0.372249114583372 0.516417295732791 -0.720830068356162 0.471014073129145 1 FALSE Leptotrichia sp._HMT_498 (SP31) 0.499205462958159 0.620636294873834 0.804344617099198 0.421197976758298 1 FALSE Tannerella sp._HMT_808 (SP316) 0.0106983473032486 0.444825371856132 0.0240506679252747 0.980812193218569 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_103 (SP318) -0.106696356182072 0.307737579045592 -0.346712145175695 0.728807585034334 1 FALSE Colibacter massiliensis (SP319) 0.221627512412365 0.405402825721315 0.546684675959112 0.584595383863693 1 FALSE Fusobacterium nucleatum (SP32) 0.303366116204118 0.369750361431514 0.820461986918998 0.411952790921973 1 FALSE Treponema sp._HMT_231 (SP324) -0.686787604190928 0.566368993989334 -1.21261511749328 0.225277006304008 1 FALSE Olsenella uli (SP328) -0.181238041757859 0.513326901287096 -0.353065544204735 0.724039303286654 1 FALSE Selenomonas noxia (SP33) 1.76989545147474 0.72851306127713 2.42946289579489 0.015121212585152 1 FALSE Leptotrichia sp._HMT_219 (SP336) 0.222308469678131 0.411924834782852 0.539682123791642 0.589416270121329 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP34) 0.18582059024282 0.690615557446853 0.269065166921207 0.787879535030351 1 FALSE Prevotella baroniae (SP340) -0.599027562666859 0.409284070065534 -1.46359852845224 0.143303674876689 1 FALSE Desulfobulbus sp._HMT_041 (SP343) -0.970539094279079 0.43374253898582 -2.2375925970932 0.0252476347575794 1 FALSE Leptotrichia wadei (SP35) 1.10726678071093 0.801886781419388 1.38082682788585 0.167332212570148 1 FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_minutum (SP351) -0.706569799249173 0.322991426357751 -2.18758066496342 0.028700161513003 1 FALSE Prevotella dentalis (SP352) -0.720506524439604 0.417444495752728 -1.72599359141244 0.0843485656799257 1 FALSE Leptotrichia hongkongensis (SP36) 0.955986751722935 0.634916459422967 1.50568903599029 0.132147019843154 1 FALSE Treponema lecithinolyticum (SP360) -0.486520079752236 0.429826308197645 -1.13189925901074 0.257676790260572 1 FALSE Neisseria flavescens (SP37) -1.0210454199371 0.526035945773943 -1.9410183432139 0.0522560524757579 1 FALSE Treponema sp._HMT_270 (SP376) 0.0769109802293648 0.311843091308172 0.24663358712462 0.805191808576927 1 FALSE Treponema denticola (SP38) -0.929471834768237 0.586563739471056 -1.58460500065416 0.113056108078333 1 FALSE Actinomyces israelii (SP39) -0.828576273828328 0.687895518439096 -1.20450889941608 0.228392944443875 1 FALSE Oribacterium sp._HMT_078 (SP4) -0.379758108432224 0.647355160459779 -0.586630232718781 0.557452073467383 1 FALSE Neisseria sicca (SP40) 0.0978506067142825 0.880864885040568 0.111084694572399 0.911549185582157 1 FALSE Parvimonas micra (SP41) -0.687356865876406 0.706461094179096 -0.972957847983279 0.33057425227763 1 FALSE Fretibacterium sp._HMT_360 (SP42) -0.308738217984103 0.666080578790819 -0.463514817598459 0.642995396275195 1 FALSE Streptococcus mitis (SP43) -0.550490863274645 0.793648571428217 -0.693620429863566 0.487920278201849 1 FALSE Kingella oralis (SP45) 0.03681503263436 0.635251211260658 0.0579535024597599 0.953785665898531 1 FALSE Rothia aeria (SP46) -0.503477872232299 0.741417747111556 -0.679074481550743 0.497090670424322 1 FALSE Porphyromonas catoniae (SP47) -0.410650506831357 0.653452113954938 -0.628432440666456 0.529720691102969 1 FALSE Streptococcus oralis (SP48) -0.410770831945882 0.648244340364239 -0.633666669137559 0.526298381503871 1 FALSE Oribacterium sinus (SP49) -0.0634635083185514 0.447426662845819 -0.141841140880825 0.88720548685407 1 FALSE Streptococcus cristatus (SP5) -0.594305351996402 0.670031694890845 -0.886980954077433 0.375089154665328 1 FALSE Capnocytophaga gingivalis (SP50) -0.437434717625095 0.637156533395025 -0.68654199509541 0.492371391833917 1 FALSE Selenomonas sputigena (SP51) 0.445305882771632 0.693825189640926 0.641812792934327 0.520994742279583 1 FALSE Actinomyces naeslundii (SP52) -0.250502524947205 0.841728026335681 -0.297605066137247 0.766004607478966 1 FALSE Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP53) 0.646296703886917 0.412330094968074 1.56742549664477 0 0 TRUE Prevotella maculosa (SP54) 0.554002870974083 0.469667204299604 1.17956473414031 0.238173376023332 1 FALSE Lancefieldella parvula (SP55) 0.191850441390088 0.614634293234689 0.312137548297899 0.754935991641523 1 FALSE Actinomyces sp._HMT_896 (SP56) 0.376451140884279 0.657424465726673 0.572615046305244 0.566905369772404 1 FALSE Peptidiphaga sp._HMT_183 (SP58) 1.12867959921304 0.912720471531963 1.23661036912933 0.216231768489633 1 FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP59) 0.470356243140458 0.546971528128064 0.859928202753421 0.389828620987975 1 FALSE Prevotella micans (SP60) -0.455345132595545 0.462688684827248 -0.98412852427017 0.325052323589787 1 FALSE Actinomyces sp._HMT_170 (SP61) 0.0696614701177492 0.857483131136323 0.0812394641809862 0.935251515343008 1 FALSE Capnocytophaga sp._HMT_380 (SP62) 0.209608276418624 0.571808622588059 0.366570681410709 0.713939280889051 1 FALSE Gemella morbillorum (SP63) -0.401608306138216 0.707231710640731 -0.567859585614975 0.570130316043468 1 FALSE Selenomonas sp._HMT_137 (SP65) -0.857680447762944 0.458842277037338 -1.86922716298252 0.0615912167030507 1 FALSE Veillonella parvula (SP66) -1.02308634309881 0.782073937225511 -1.30817087029944 0.190815359916718 1 FALSE Prevotella sp._HMT_443 (SP68) -0.0856376254637239 0.494390786380273 -0.173218489953519 0.86247969044442 1 FALSE Streptococcus chosunense (SP69) -0.856281361920894 0.54220870849377 -1.57924678911854 0.114279461662346 1 FALSE Prevotella oris (SP7) 1.01631732169897 0.75004188248826 1.35501409378279 0.175413066725166 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP71) 0.3745959039341 0.686272429247266 0.5458414005426 0.585174962057965 1 FALSE Neisseria elongata (SP72) 1.1668505262281 0.706934659970933 1.65057761671507 0.0988248524940284 1 FALSE Capnocytophaga sp._HMT_864 (SP73) -0.142451352066482 0.66755572981767 -0.213392449054987 0.83102086965758 1 FALSE Treponema sp._HMT_268 (SP74) 0.0216181367328317 0.418212724926709 0.0516917239584716 0.958774331749407 1 FALSE Dialister invisus (SP75) -0.629290964862357 0.634164295328307 -0.992315350293528 0.32104371753708 1 FALSE Treponema sp._HMT_262 (SP76) 0.188666954066932 0.428387827955617 0.440411565770441 0.65963904967412 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP77) 0.84464086165002 0.696495477784276 1.21270114249274 0.225244102880091 1 FALSE Prevotella loescheii (SP78) -0.051298687761542 0.715441969350091 -0.0717020945921607 0.942838989211924 1 FALSE Peptoanaerobacter [Eubacterium] yurii (SP79) 0.739069601841698 0.639232077243681 1.15618353357439 0.247606093654915 1 FALSE Prevotella denticola (SP8) 1.02854722902803 0.679685947304949 1.51326834563282 0.130211509823284 1 FALSE Prevotella buccae (SP80) 0.0231565201370961 0.422939103282735 0.0547514286509846 0.956336496638383 1 FALSE Porphyromonas endodontalis (SP81) -0.567802104318595 0.694451864519884 -0.81762629395653 0.413570608753449 1 FALSE Schaalia odontolytica (SP82) -0.359090526281242 0.771313304333719 -0.465557282966141 0.641532425374324 1 FALSE Alloprevotella rava (SP83) -0.466017976722847 0.438116171288677 -1.06368586065221 0.287471031838476 1 FALSE Scardovia wiggsiae (SP84) -0.613150791031503 0.602349466748368 -1.01793198945032 0.308710277947111 1 FALSE Alloprevotella tannerae (SP85) 0.763873707281263 0.664310421066951 1.14987464151835 0.250195506711944 1 FALSE Porphyromonas pasteri (SP86) -1.07323227469545 0.746618856790223 -1.43745669552115 0.150588269054888 1 FALSE Selenomonas sp._HMT_138 (SP87) -0.952552229972606 0.409476737116578 -2.32626702234714 0.0200043101470043 1 FALSE Parvimonas sp._HMT_110 (SP88) 0.243497046019331 0.511178902520807 0.476344083878578 0.633829263709649 1 FALSE Actinomyces oris (SP89) -0.403247519698205 0.799153845632308 -0.504593104196536 0.613844654194826 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP9) -0.648537563808721 0.650085820730201 -0.997618380724346 0.31846444462959 1 FALSE Abiotrophia defectiva (SP90) 0.407162518607713 0.721756371808689 0.564127362793324 0.572667457238419 1 FALSE Actinomyces sp._HMT_171 (SP91) -0.558527239044581 0.712360582671378 -0.784051297378195 0.433010011059067 1 FALSE Shuttleworthia satelles (SP92) 0.025201893979078 0.435868254979244 0.0578199804440405 0.953892022709781 1 FALSE Prevotella sp._HMT_300 (SP93) 0.990938697991669 0.582733627428865 1.7005002823741 0.0890368633342603 1 FALSE Campylobacter concisus (SP94) -0.353476483256217 0.608220904404637 -0.581164640505444 0.561129496335537 1 FALSE Prevotella sp._HMT_292 (SP95) -0.0753243326775944 0.431885971839352 -0.174407916878607 0.861544892905523 1 FALSE Eikenella corrodens (SP96) -0.656587449593571 0.654156955150675 -1.00371546067616 0.315515782752458 1 FALSE Lachnoanaerobaculum umeaense (SP97) 0.0387172457967278 0.419692877646478 0.0922513768016351 0.926498319252764 1 FALSE Stomatobaculum longum (SP98) 0.452361940405125 0.628690336133532 0.719530608959518 0.471814049636651 1 FALSE Selenomonas artemidis (SP99) -0.654629635211723 0.663987686210239 -0.985906288335063 0.324179100813148 1 FALSE Lacrimispora xylanolytica_nov_89.105% (SPN105) 0.109328931356534 0.495871217171055 0.220478478223147 0.825498531893015 1 FALSE Actinomyces israelii_nov_97.217% (SPN108) 0.399139913391848 0.609367217868636 0.655007197118195 0.512463120272108 1 FALSE Wolinella succinogenes_nov_97.320% (SPN109) 0.0383695544979326 0.281955958456394 0.136083502927166 0.891755268957324 1 FALSE Cardiobacterium hominis_nov_96.545% (SPN117) -0.938841496707436 0.462654981677564 -2.02924756868119 0.0424330807097471 1 FALSE Actinomyces israelii_nov_96.507% (SPN13) 0.448974970529661 0.519508890561269 0.86422961894761 0.387461764398905 1 FALSE Actinomyces sp._HMT_175_nov_97.633% (SPN130) -0.846403423562443 0.456950246170076 -1.85228792555987 0.0639844886359091 1 FALSE Capnocytophaga gingivalis_nov_97.665% (SPN152) 0.0259907437446841 0.545289494852453 0.0476641196832828 0.961983929929281 1 FALSE Corynebacterium durum_nov_97.379% (SPN158) -0.964769668596725 0.457196750285733 -2.11018487772228 0.034842434568746 1 FALSE Streptococcus sanguinis_nov_97.727% (SPN176) -0.786840593034507 0.459817794350309 -1.71120083368296 0.0870440448498412 1 FALSE Capnocytophaga gingivalis_nov_90.856% (SPN210) 0.150377496657577 0.401320928745174 0.37470634070286 0.707878876088068 1 FALSE Prevotella sp._HMT_300_nov_97.835% (SPN223) 0.516686938603437 0.367216297001693 1.40703705914516 0 0 TRUE Actinomyces viscosus_nov_96.226% (SPN71) -0.263438364643135 0.531402667578874 -0.495741517150051 0.620076791249075 1 FALSE Selenomonas sp._HMT_137_nov_97.137% (SPN73) -0.282729357770165 0.356494567905392 -0.793081811684707 0.427730159000865 1 FALSE Propionivibrio dicarboxylicus_nov_93.922% (SPN89) -0.130319699654277 0.369894782827463 -0.35231559271563 0.72460159559233 1 FALSE Porphyromonas catoniae_nov_97.338% (SPN90) -0.247636703802441 0.350986626087569 -0.705544557531539 0.480471413198164 1 FALSE Tannerella serpentiformis_sp._HMT_286 (SPP10) 0.0577960197485982 0.548909847722656 0.105292371759015 0.91614381578447 1 FALSE Veillonella dispar_parvula (SPP22) 0.259207896242189 0.548510391906767 0.472566974239291 0.63652214904367 1 FALSE