GroupCaries_Free...1 GroupCaries_Free...2 GroupCaries_Free...3 GroupCaries_Free...4 GroupCaries_Free...5 GroupCaries_Free...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Corynebacterium matruchotii (SP1) -0.177020683506698 0.378886632189521 -0.467212797885545 0.640347638216245 1 FALSE Prevotella oris (SP102) -0.387501336069458 0.448561667577251 -0.86387527976345 0.387656407947552 1 FALSE Leptotrichia sp._HMT_498 (SP103) -0.517664881876134 0.514133504618553 -1.00686859974279 0.313997923274047 1 FALSE Aggregatibacter sp._HMT_949 (SP104) -0.0469358322695676 0.339620089813228 -0.138200988920825 0.890081573552197 1 FALSE Streptococcus sp._HMT_056 (SP105) -0.00951804131622475 0.313589757812574 -0.0303518883480674 0.975786414695224 1 FALSE Granulicatella adiacens (SP106) -0.460807083927193 0.446859863688944 -1.03121161995421 0.302441592710536 1 FALSE Leptotrichia sp._HMT_212 (SP107) 0.654221950221899 0.493715952758645 1.32509785549044 0.185138697332474 1 FALSE Neisseria oralis (SP108) 0.73899442110586 0.494222482064295 1.49526670259756 0.134844851441252 1 FALSE Streptococcus sanguinis (SP11) -0.137166901893994 0.51128896552796 -0.268276671592853 0.788486361624598 1 FALSE Corynebacterium durum (SP110) -0.270642956548411 0.529040992536857 -0.511572752142749 0.608950059422364 1 FALSE Capnocytophaga endodontalis (SP111) -0.865134803607068 0.43535391346825 -1.98719886704352 0.0469003633672571 1 FALSE Prevotella micans (SP113) -0.00139478210439181 0.320852714722639 -0.0043471101860476 0.996531518822641 1 FALSE Aggregatibacter segnis (SP115) -0.049176186712982 0.309068815290145 -0.159110800831902 0.873581578793585 1 FALSE Leptotrichia wadei (SP116) -1.53678403256066 0.590569167224795 -2.60220837430833 0.0092625554380904 1 FALSE Actinomyces sp._HMT_896 (SP117) -0.481030205021757 0.344473838440645 -1.39642013802636 0.162588014330714 1 FALSE Prevotella loescheii (SP118) 0.0781385002050153 0.532432530496005 0.146757562187688 0.883323382371727 1 FALSE Selenomonas noxia (SP12) -0.439219403736642 0.505190243889928 -0.869413867446618 0.384620800784801 1 FALSE Schaalia georgiae (SP121) -0.319719315267941 0.418853206629412 -0.763320681822589 0.445272170770008 1 FALSE Fusobacterium sp._HMT_203 (SP123) -0.119263636938699 0.317580641262165 -0.375538119907774 0.707260301793215 1 FALSE Streptococcus australis (SP124) -0.445063927443722 0.31344285372593 -1.41992048041038 0.155630832759933 1 FALSE Selenomonas flueggei (SP125) -0.118127093496657 0.315485514341625 -0.374429532028346 0.70808477485739 1 FALSE Leptotrichia sp._HMT_219 (SP126) 0.0414716683065496 0.333279459080513 0.124435116466421 0.900970770487661 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP127) -0.0714626068767161 0.294020589364608 -0.243053069960679 0.807964285915657 1 FALSE Capnocytophaga sputigena (SP128) 0.531789761437046 0.480088026585768 1.10769219807243 0.267994769957935 1 FALSE Selenomonas sputigena (SP129) -0.98468147514746 0.411693678094345 -2.39178186972744 0.0167668039004131 1 FALSE Prevotella sp._HMT_317 (SP13) -0.297676090438031 0.541125607539134 -0.550105347613776 0.582247119036533 1 FALSE Porphyromonas sp._HMT_278 (SP130) -0.110104670858261 0.31343298879953 -0.351286159379615 0.725373677352284 1 FALSE Rothia dentocariosa (SP132) -1.35100429738253 0.568857635890062 -2.37494271351159 0.0175516739942076 1 FALSE Campylobacter gracilis (SP133) -0.763460698403322 0.407617934618288 -1.87298112659901 0.0610709912502247 1 FALSE Schaalia odontolytica (SP134) -0.42070224022505 0.438155207228737 -0.960167158313432 0.336971092796586 1 FALSE Peptidiphaga sp._HMT_183 (SP135) -0.471110021655339 0.672671053251238 -0.700357209334801 0.483704252299106 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP136) 0.274532388368371 0.333569176504341 0.823014857803559 0.410499544297646 1 FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP137) -0.503999513338076 0.292767038010053 -1.72150361175827 0.0851594773487973 1 FALSE Selenomonas sp._HMT_138 (SP138) -0.439282583856856 0.27725901705696 -1.58437618556013 0.113108137931779 1 FALSE Actinomyces sp._HMT_169 (SP14) -0.651247107679794 0.529498025892096 -1.22993302304116 0.218722186802288 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP140) 0.229835912068657 0.396528821549622 0.579619688602874 0.562171112829857 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP141) -0.754096364750412 0.397722812103505 -1.89603498165492 0.0579554189946654 1 FALSE Parvimonas sp._HMT_110 (SP144) -0.159083299724009 0.404922835567637 -0.392873124828833 0.694413192123459 1 FALSE Selenomonas sp._HMT_137 (SP147) -0.210771016203208 0.32305610708206 -0.652428514993743 0.514124774177615 1 FALSE Capnocytophaga sp._HMT_332 (SP148) -0.1468317956628 0.39232442118429 -0.374261166866866 0.708210020459549 1 FALSE Lautropia mirabilis (SP149) 0.69153353038502 0.427676744651401 1.61695378351397 0.105888257467023 1 FALSE Leptotrichia hongkongensis (SP15) -1.02727491589378 0.561423353868769 -1.8297687632957 0.0672845235641433 1 FALSE Neisseria elongata (SP150) 0.502061511617844 0.403280052416179 1.24494506636228 0.213151943643197 1 FALSE Capnocytophaga granulosa (SP152) -0.902680315988728 0.40846564948506 -2.20992956721504 0.0271100508408357 1 FALSE Actinomyces gerencseriae (SP153) -0.924632207290901 0.480109945204605 -1.92587597179821 0.0541198623645309 1 FALSE Capnocytophaga sp._HMT_864 (SP154) 0.154857841457093 0.341937689706127 0.452883218548335 0.650632835488681 1 FALSE Prevotella oulorum (SP155) -0.713753963909217 0.444526473202951 -1.60565007246115 0.108350817020159 1 FALSE Schaalia sp._HMT_180 (SP156) -0.827166424193994 0.330770164059074 -2.50072864506082 0.0123938100860026 1 FALSE Prevotella sp._HMT_314 (SP157) -0.483798313298614 0.331837207177905 -1.45793872065479 0.14485743457714 1 FALSE Rothia aeria (SP159) 0.416351532402644 0.498483362341411 0.835236567268788 0.403584524602819 1 FALSE Fusobacterium nucleatum (SP16) 0.191198009927355 0.299838749511112 0.637669448125381 0.523688877475099 1 FALSE Schaalia meyeri (SP160) 0.355718371416012 0.317142642674314 1.12163526297317 0.262017551970116 1 FALSE Pseudoleptotrichia goodfellowii (SP161) 0.349592984405889 0.469814295028583 0.744108870473215 0.456810613278957 1 FALSE Leptotrichia sp._HMT_215 (SP163) -0.410115428376369 0.345968348498543 -1.18541314590255 0.235854136595541 1 FALSE Actinomyces sp._HMT_170 (SP167) 0.0610700632915113 0.47559486472138 0.128407743273865 0.89782630364132 1 FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP168) -0.212204725509353 0.436189197951038 -0.486496975409219 0.62661484927599 1 FALSE Streptococcus intermedius (SP169) -0.716598855582552 0.540788690144783 -1.32509956040445 0.185138131931419 1 FALSE Leptotrichia sp._HMT_417 (SP17) -1.15202967107187 0.383927086637779 -3.00064702691521 0.00269406657574478 0.436438785270654 FALSE Prevotella sp._HMT_472 (SP170) 0.128429547568913 0.310153432425117 0.4140839150633 0.678812652250243 1 FALSE Actinomyces sp._HMT_171 (SP172) -0.794064562647976 0.335171859664471 -2.36912658312928 0.0178301498658399 1 FALSE Schaalia sp._HMT_178 (SP176) -0.447252364294298 0.440699059573486 -1.01487024893394 0.310167681688164 1 FALSE Oribacterium sp._HMT_078 (SP177) -0.743568875957941 0.359551500976928 -2.06804553433266 0.038635741543275 1 FALSE Porphyromonas sp._HMT_275 (SP179) -0.226137388080752 0.37895268759511 -0.596743064459717 0.550678935977138 1 FALSE Fusobacterium sp._HMT_204 (SP18) 0.0185748518133619 0.320335317444763 0.0579856506660865 0.953760058403847 1 FALSE Selenomonas infelix (SP180) -0.756604523489828 0.387802765687189 -1.9510034234777 0.0510566385393286 1 FALSE Aggregatibacter aphrophilus (SP182) 0.0472972423702237 0.345769982971183 0.136788167566777 0.891198236639416 1 FALSE Prevotella maculosa (SP183) -0.354572281533209 0.405988798663342 -0.873354838115204 0.382469698928823 1 FALSE Neisseria flavescens (SP185) 0.31053717535837 0.364048029769283 0.853011553324913 0.393652897323141 1 FALSE Neisseria subflava (SP187) -0.219783890965345 0.374790153382049 -0.586418530428424 0.557594294756407 1 FALSE Kingella sp._HMT_012 (SP188) 0.140066578884185 0.354684682783259 0.394904504432116 0.69291336556654 1 FALSE Leptotrichia hofstadii (SP19) -0.820768968975372 0.591804029128567 -1.38689317506668 0.165474339281853 1 FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP191) 0.0557623849320348 0.280146815512565 0.199047006227824 0.842225974546271 1 FALSE Streptococcus parasanguinis_clade_411 (SP193) -0.510549635068902 0.232355800049616 -2.19727519158068 0.0280007983295615 1 FALSE Haemophilus parahaemolyticus (SP199) -0.407070088775601 0.310411458162544 -1.31138873282971 0.189726463501306 1 FALSE Lachnoanaerobaculum orale (SP2) -0.801286419981259 0.330508764077829 -2.42440294198241 0.0153335814734847 1 FALSE Capnocytophaga leadbetteri (SP20) 0.0323877960610685 0.423742941035698 0.0764326503750302 0.939074894328735 1 FALSE Alloprevotella sp._HMT_473 (SP209) -0.227708350692708 0.297121402537114 -0.766381515260466 0.44344932821137 1 FALSE Campylobacter concisus (SP21) -0.847317051550294 0.382519193240131 -2.21509682788225 0.0267534191283241 1 FALSE Peptidiphaga gingivicola (SP214) -0.639688988317242 0.440604293611101 -1.4518446542463 0.146544804473104 1 FALSE Catonella morbi (SP215) 0.374873901587403 0.373680252125012 1.00319430704621 0.315767119249985 1 FALSE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP225) -0.341480292791365 0.268104314271724 -1.27368443778668 0.202775273868845 1 FALSE Selenomonas sp._HMT_920 (SP227) -0.710151572492457 0.269634267577161 -2.63375860521598 0.00844455013062744 1 FALSE Bergeyella sp._HMT_322 (SP23) 0.905363054874038 0.408300847671969 2.21739205303196 0.026596312298578 1 FALSE Johnsonella ignava (SP237) -0.544755288885187 0.286241949047155 -1.9031287716513 0.0570237445034261 1 FALSE Olsenella sp._HMT_807 (SP239) -0.749861847396438 0.299919632752188 -2.50020927444926 0.0124119961195712 1 FALSE Aggregatibacter sp._HMT_513 (SP24) -0.0326195990606865 0.37722300795352 -0.0864729838130812 0.931090431404257 1 FALSE Streptococcus cristatus (SP25) -0.152764257803376 0.455407493353397 -0.335445200250209 0.737289276149806 1 FALSE Alloprevotella sp._HMT_913 (SP250) 0.108387946074675 0.260705699661668 0.415748279440517 0.677594208825148 1 FALSE Selenomonas dianae (SP254) -0.66199841390187 0.278711557516534 -2.37520976812237 0.0175389795014471 1 FALSE Streptococcus mitis (SP26) 0.57090239788702 0.519298648061123 1.09937200880181 0.271605834902408 1 FALSE Rothia mucilaginosa (SP263) -0.0410969047167851 0.370309052379264 -0.110980016428803 0.911632193408641 1 FALSE Actinomyces sp._HMT_525 (SP27) -0.65306361606235 0.413615316220783 -1.57891545707111 0.114355450092548 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP28) 0.470173655048213 0.469018149484684 1.00246366918806 0.316119704906054 1 FALSE Kingella denitrificans (SP30) -0.0655276284589481 0.414760040751506 -0.157989251665175 0.874465268273617 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP31) 0.227124574785338 0.540908779359245 0.41989441372053 0.674562588859933 1 FALSE Actinomyces johnsonii (SP32) -0.249115964084347 0.523824466402391 -0.475571455826162 0.63437971500978 1 FALSE Cardiobacterium valvarum (SP33) -0.328898609947366 0.415941265714746 -0.790733300727429 0.429099639218959 1 FALSE Capnocytophaga sp._HMT_336 (SP34) -0.798234000891779 0.389721109711468 -2.04821853628292 0.0405385909638636 1 FALSE Neisseria mucosa (SP36) -0.434949974275676 0.514423778399578 -0.845509077416382 0.397826666634627 1 FALSE Actinomyces oris (SP37) -0.367682935205017 0.493214362004477 -0.745483026306681 0.455979768497451 1 FALSE Leptotrichia sp._HMT_392 (SP38) 0.255175967658219 0.497955545554912 0.512447285578184 0.608338004499555 1 FALSE Neisseria sicca (SP39) 0.31726030665955 0.537375632324258 0.590388338390663 0.554930327028274 1 FALSE Lachnoanaerobaculum umeaense (SP4) 0.426378409228175 0.459239143885902 0.928445266273095 0.35317664704264 1 FALSE Leptotrichia buccalis (SP41) 1.20377830495141 0.528906399053759 2.27597606515071 0.0228474422035126 1 FALSE Prevotella salivae (SP42) -1.07516064969029 0.310687553189722 -3.46058488231018 0.000539003275560442 0.0894745437430334 FALSE Dialister invisus (SP43) -0.261443882706878 0.307510354076354 -0.850195381199951 0.395216469224317 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP44) 0.144900347700674 0.340367563189544 0.425717263839214 0.670313880797112 1 FALSE Capnocytophaga ochracea (SP45) -0.558212285109798 0.459967893663631 -1.21358967180003 0.224904452971804 1 FALSE Capnocytophaga sp._HMT_380 (SP46) -0.410560753773338 0.367969768745971 -1.11574588089809 0.264530925267939 1 FALSE Gemella morbillorum (SP47) -0.0547343022065046 0.426014720203244 -0.128479837927647 0.897769252981894 1 FALSE Haemophilus parainfluenzae (SP48) -0.00961892360025751 0.507811652236091 -0.0189419119429451 0.984887444634847 1 FALSE Streptococcus oralis (SP5) -0.775507732581508 0.473837768231402 -1.63665242531445 0.101703114830194 1 FALSE Leptotrichia trevisanii (SP50) 0.0163006911235548 0.440808052172177 0.0369791137961969 0.970501659124594 1 FALSE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_872 (SP51) 0.631921827152342 0.335910450940744 1.88122109741627 0.0599418489745675 1 FALSE Abiotrophia defectiva (SP52) 0.550241076142594 0.445833749048237 1.2341844405392 0.217134183988979 1 FALSE Arachnia propionica (SP53) -0.291960843996817 0.455980395421075 -0.640292536540318 0.521982432010635 1 FALSE Streptococcus mutans (SP55) -1.13367286945974 0.399262619086102 -2.8394165024882 0.00451961216789172 0.727657559030567 FALSE Streptococcus gordonii (SP58) -1.1827543972714 0.374937873803708 -3.15453433730893 0.00160754460190897 0.263637314713072 FALSE Alloprevotella tannerae (SP59) -0.479568561139162 0.311538955138405 -1.5393534363178 0.123718035080303 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP61) 0.606348110057403 0.538224834592506 1.12657029383728 0.259924204775049 1 FALSE Cardiobacterium hominis (SP62) 0.698765498038923 0.465764536504114 1.50025483538022 0.133548403821867 1 FALSE Prevotella melaninogenica (SP63) -0.697535808172717 0.484321836877041 -1.44023200083338 0.149801772372532 1 FALSE Kingella oralis (SP64) -0.139105645526285 0.463095769798797 -0.300382025918143 0.763885772266161 1 FALSE Stomatobaculum longum (SP65) -0.985440347148624 0.304617080566376 -3.23501343167096 0.00121637008533737 0.200701064080666 FALSE Fusobacterium periodonticum (SP66) 0.45325494193428 0.503461819531777 0.900276692988975 0.367973021181743 1 FALSE Capnocytophaga gingivalis (SP67) 1.47313978837972 0.467122069667268 3.15365058522934 0.00161242016635616 0.263637314713072 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP68) -0.350891331418205 0.405052046420549 -0.866287022912333 0.386332780979662 1 FALSE Leptotrichia shahii (SP69) -0.587717572470079 0.503236856677547 -1.16787465916206 0.242857327206746 1 FALSE Porphyromonas catoniae (SP7) 0.90405237628379 0.432490550584635 2.09034018214203 0.0365872521576311 1 FALSE Eikenella corrodens (SP70) 0.848987274951572 0.41373901650761 2.05198746329972 0.0401708808045849 1 FALSE Aggregatibacter sp._HMT_898 (SP71) 0.132708453532988 0.395388282324895 0.335640835769483 0.7371417261028 1 FALSE Streptococcus chosunense (SP72) -0.63124170920586 0.41257415149423 -1.53000789535572 0.126014774637263 1 FALSE Actinomyces naeslundii (SP73) -1.26102898161494 0.560282931918832 -2.25070033330522 0.0244045236510733 1 FALSE Peptoanaerobacter [Eubacterium] yurii (SP74) 0.404987958757435 0.415509148524701 0.974678801165698 0.329719611559018 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP76) -0.229600109067784 0.324427751061439 -0.707707982182767 0.479126619442332 1 FALSE Tannerella sp._HMT_286 (SP77) 0.629948091672265 0.493636940812024 1.27613644683077 0.2019072897037 1 FALSE Campylobacter showae (SP78) 0.303740918398216 0.421817982665136 0.72007579306865 0.471478330848391 1 FALSE Prevotella saccharolytica (SP79) 1.10303973275541 0.425348829293563 2.59325912472215 0.0095071109865599 1 FALSE Porphyromonas pasteri (SP8) -0.294033206226473 0.464172427074367 -0.633456855849313 0.526435346641619 1 FALSE Actinomyces sp._HMT_175 (SP80) -1.1762526443313 0.518576175368136 -2.26823502544497 0.023314885720526 1 FALSE Treponema socranskii (SP81) -0.0176696706949836 0.343681410999603 -0.0514129368928947 0.958996476257476 1 FALSE Treponema sp._HMT_231 (SP82) 0.0165485929718337 0.28917381944215 0.0572271480307515 0.954364252590911 1 FALSE Actinomyces massiliensis (SP83) 0.0273075159382565 0.504117081904784 0.0541689954942138 0.9568005224144 1 FALSE Gemella haemolysans (SP84) -0.406160107478481 0.477080856606468 -0.851344382936564 0.394578077089886 1 FALSE Aggregatibacter sp._HMT_458 (SP86) 0.0761812876026589 0.478719944401425 0.159135395325786 0.873562202096572 1 FALSE Actinomyces dentalis (SP87) -0.881242134590917 0.411479597838626 -2.14164235412839 0.0322222727485344 1 FALSE Leptotrichia sp._HMT_225 (SP89) 0.874503647326822 0.462155946520014 1.89222632297982 0.0584608325925277 1 FALSE Veillonella parvula (SP9) -0.637099998574564 0.524150698650225 -1.21549012567416 0.224179212595235 1 FALSE Lachnoanaerobaculum saburreum (SP90) -0.759982629179107 0.470737470076441 -1.61445110595444 0.1064296141335 1 FALSE Selenomonas artemidis (SP91) 0.0770866467082595 0.374519620055303 0.205828059680496 0.836925222007441 1 FALSE Streptococcus salivarius (SP92) -0.461392426141295 0.351639676043455 -1.31211708340977 0.18948063274526 1 FALSE Bergeyella sp._HMT_900 (SP93) 0.386853378481967 0.412050085662854 0.938850377520604 0.347807569615831 1 FALSE Selenomonas sp._HMT_892 (SP97) 0.0734058119427683 0.28975587351915 0.253336752250225 0.800007997985201 1 FALSE Granulicatella elegans (SP98) -0.0882706409991574 0.340127043633168 -0.259522559736116 0.795232077980774 1 FALSE Streptococcus sp._HMT_066 (SP99) -0.165899624285355 0.288351083327437 -0.575339001230553 0.56506204944894 1 FALSE Cardiobacterium hominis_nov_96.161% (SPN115) 0.137679386263447 0.337010377196454 0.408531593029223 0.682883440975459 1 FALSE Actinomyces sp._HMT_175_nov_97.633% (SPN34) -0.356693047791439 0.320337813353972 -1.1134902996834 0.26549791213934 1 FALSE Corynebacterium durum_nov_97.984% (SPN41) -0.319512396547199 0.443375519474891 -0.720636080507132 0.471133448879866 1 FALSE Kingella oralis_nov_97.826% (SPN52) 0.348371459497277 0.321712039082427 1.08286733841509 0.278867311044031 1 FALSE Selenomonas noxia_nov_96.691% (SPN61) 0.0573420137541691 0.279893101281173 0.204871122195202 0.837672817801213 1 FALSE Fusobacterium nucleatum_nov_97.018% (SPN68) -0.65185010272264 0.357083694878322 -1.82548268675432 0.0679282215033601 1 FALSE Porphyromonas catoniae_nov_97.719% (SPN80) 0.0803378648946758 0.384207139776889 0.209100395534889 0.834369865937456 1 FALSE Porphyromonas catoniae_nov_97.909% (SPN92) -0.191370174540941 0.358540866788909 -0.533747174359375 0.593516466226028 1 FALSE Veillonella dispar_parvula (SPP1) -1.16470619343158 0.444965969214131 -2.61751745979272 0.00885719569520981 1 FALSE Tannerella serpentiformis_sp._HMT_286 (SPP5) -0.919693917423974 0.412589533853405 -2.22907718679734 0.0258087695245228 1 FALSE Porphyromonas multispecies_sppn2_2_nov_97.431% (SPPN2) -0.336679911391654 0.279856520203352 -1.20304472858811 0.228959012183292 1 FALSE