Taxon F9928.S37 F9928.S43 F9928.S49 F9928.S55 F9928.S58 F9928.S61 Corynebacterium tuberculostearicum (SP1) 0 357 2185 78 0 49 Streptococcus anginosus (SP101) 29 0 0 187 0 18903 Bifidobacterium scardovii (SP103) 0 0 0 0 0 3143 Bifidobacterium longum (SP104) 130 0 0 7280 153349 26565 Prevotella bivia (SP105) 0 0 397 0 0 0 Finegoldia magna (SP106) 10 0 288 65 0 0 Gemella haemolysans (SP108) 0 0 0 0 0 16 Collinsella aerofaciens (SP109) 0 0 8754 1238 0 18455 Peptoniphilus grossensis (SP110) 7 0 0 34 0 0 Serratia nematodiphila (SP120) 0 8952 0 0 0 0 Bacteroides fragilis (SP121) 0 0 0 303 7721 0 Phocaeicola vulgatus (SP123) 0 0 865 155 325 6323 Staphylococcus saccharolyticus (SP124) 0 0 4337 0 0 0 Clostridium paraputrificum (SP125) 0 0 0 83 0 0 Clostridium tertium (SP127) 0 0 13428 0 0 0 Granulicatella adiacens (SP135) 0 0 738 0 0 0 Haemophilus parainfluenzae (SP136) 0 0 0 0 0 24 Peptostreptococcus anaerobius (SP137) 0 0 0 0 0 6 Paratractidigestivibacter faecalis (SP140) 0 0 0 38 16 0 Stutzerimonas [Pseudomonas] urumqiensis (SP144) 137 0 1885 274 0 0 Bacteroides faecis (SP145) 0 0 0 0 416 442 Mediterraneibacter [Ruminococcus] gnavus (SP146) 0 0 0 433 33458 0 Cutibacterium acnes (SP147) 18 0 11535 66 0 0 Staphylococcus lugdunensis (SP149) 0 0 0 0 8 0 Corynebacterium amycolatum (SP150) 0 0 5619 0 0 2439 Serratia surfactantfaciens (SP152) 0 9994 0 0 0 0 Acinetobacter baumannii (SP155) 0 216 7686 0 0 0 Veillonella dispar (SP156) 0 0 54 149 0 0 Porphyromonas pasteri (SP159) 0 0 0 48 0 0 Citrobacter koseri (SP160) 0 0 0 1690 0 0 Lactobacillus gasseri (SP162) 0 0 0 37 0 0 Faecalibacterium prausnitzii (SP173) 0 0 2965 0 0 0 Bifidobacterium bifidum (SP182) 0 0 534 884 0 0 Rothia dentocariosa (SP183) 0 0 1520 0 0 0 Parabacteroides distasonis (SP186) 0 0 0 37 131 3098 Pantoea conspicua (SP187) 0 0 668 0 0 0 Actinomyces oris (SP189) 3 7 3630 0 0 0 Prevotella melaninogenica (SP192) 0 0 763 0 0 0 Bacteroides thetaiotaomicron (SP193) 0 0 0 142 1592 2439 Actinomyces urogenitalis (SP195) 0 0 0 0 3 2341 Phocaeicola dorei (SP199) 0 0 193 0 0 0 Streptococcus sanguinis (SP203) 0 0 425 0 0 0 Stenotrophomonas maltophilia (SP204) 0 0 11837 0 0 0 Peptostreptococcus stomatis (SP212) 0 0 687 0 0 0 Granulicatella elegans (SP217) 0 7 0 0 0 0 Streptococcus sp._HMT_074 (SP22) 0 0 107 0 0 0 Neisseria perflava (SP227) 0 0 2155 0 0 0 Staphylococcus simulans (SP234) 0 0 1787 0 0 0 Serratia marcescens (SP243) 0 3408 0 0 0 0 Actinomyces massiliensis (SP244) 0 0 2535 0 0 0 Eggerthella lenta (SP250) 0 0 0 37 339 0 Anaerococcus sp._HMT_294 (SP266) 0 0 0 99 3 0 Corynebacterium kroppenstedtii (SP284) 11 0 917 73 0 0 Bifidobacterium dentium (SP288) 0 0 0 1469 0 0 Corynebacterium pilbarense (SP298) 0 0 421 0 0 0 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP305) 0 0 515 0 0 0 Dermabacter hominis (SP307) 0 0 0 0 0 95 Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP309) 0 9 0 0 0 0 Actinomyces israelii (SP325) 0 0 1311 0 0 0 Actinomyces ihuae (SP327) 0 0 0 84 0 181 Bacteroides caccae (SP341) 0 0 0 0 0 701 Winkia neuii (SP357) 0 0 0 0 0 293 Actinomyces naeslundii (SP359) 0 0 411 0 0 0 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP365) 4 0 0 0 0 0 Bacteroides stercoris (SP400) 0 0 0 0 0 78 Anaerococcus hydrogenalis (SP42) 0 0 0 12 0 0 Schaalia lingnae_[Not_Validly_Published] (SP44) 0 0 1138 0 0 0 Proteus mirabilis (SP45) 0 0 0 12 0 0 Bilophila wadsworthia (SP458) 0 0 0 0 0 401 Rothia mucilaginosa (SP51) 7 0 8813 1451 3 28 Enterobacter bugandensis (SP52) 0 0 531 0 0 0 Enterococcus faecalis (SP53) 19 17 40482 151 638 15871 Fusobacterium nucleatum (SP54) 0 0 0 0 0 3300 Streptococcus parasanguinis_clade_411 (SP55) 0 0 738 1207 0 0 Clostridium perfringens (SP58) 0 0 0 16303 2 0 Staphylococcus hominis (SP63) 0 0 1119 0 0 0 Streptococcus lactarius (SP64) 0 0 3380 0 0 0 Streptococcus peroris (SP65) 0 0 3 0 0 0 Enterobacter mori (SP67) 0 0 0 25964 0 0 Staphylococcus haemolyticus (SP75) 118634 52121 4105 0 0 93 Veillonella sp._HMT_780 (SP80) 0 0 272 0 0 0 Stenotrophomonas geniculata (SP82) 199 0 39604 108 0 20 Lautropia mirabilis (SP87) 3 0 0 0 0 5 Raoultella planticola (SP88) 0 0 5024 0 0 16 Lawsonella clevelandensis (SP89) 31 5 0 336 0 3411 Bifidobacterium breve (SP90) 64 0 0 25 45 0 Klebsiella oxytoca (SP97) 0 0 552 15261 0 0 Schaalia odontolytica (SP98) 0 0 2550 0 0 0 Peptoniphilaceae_[G-3] bacterium_HMT_929_nov_88.739% (SPN102) 0 0 117 0 2 0 Enterococcus faecalis_nov_96.788% (SPN18) 0 0 108 0 0 49 Enterococcus faecalis_nov_89.507% (SPN36) 0 0 80 0 0 70 Mediterraneibacter [Ruminococcus] gnavus_nov_92.601% (SPN45) 0 0 0 3 1233 0 Rothia mucilaginosa_nov_97.991% (SPN9) 0 0 148 0 0 0 Streptococcus parasanguinis_clade_411_sinensis_sp._HMT_056 (SPP10) 0 0 29 26 0 0 Streptococcus australis_rubneri_sp._HMT_066 (SPP121) 0 0 3 0 0 0 Klebsiella pneumoniae_quasipneumoniae (SPP127) 0 0 385 0 0 0 Staphylococcus capitis_caprae (SPP141) 12162 0 89 0 0 0 Staphylococcus capitis_caprae_epidermidis (SPP142) 85339 143079 16089 19187 94 0 Enterobacter asburiae_cancerogenus_cloacae_hormaechei (SPP148) 0 0 7563 13470 0 0 Streptococcus cristatus_cristatus_clade_578 (SPP149) 0 0 185 3 0 0 Streptococcus lactarius_peroris (SPP155) 0 0 43 11 0 0 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(18 species) (SPP16) 0 0 150 0 0 0 Streptococcus salivarius_vestibularis (SPP161) 0 0 3045 51286 85 31 Escherichia_Shigella coli_fergusonii_flexneri_sonnei (SPP165) 0 0 35287 41384 1050 19480 Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP17) 171 0 9682 78 54 110 Enterococcus casseliflavus_gallinarum (SPP172) 0 0 66 0 0 0 Bacillus inaquosorum_spizizenii_subtilis_tequilensis (SPP182) 24 6 6478 79 0 0 Anaerococcus mediterraneensis_murdochii (SPP21) 0 0 0 0 0 9 Bifidobacterium adolescentis_faecale (SPP25) 0 0 1403 759 0 46 Streptococcus parasanguinis_clade_411_sp._HMT_057 (SPP33) 0 0 55 0 0 0 Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP37) 0 0 1321 0 0 0 Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP39) 0 0 2247 0 0 0 Atopobium_Lancefieldella parvula_parvulum (SPP41) 0 4 0 0 0 0 Colibacter_Megasphaera massiliensis_sp._HMT_123 (SPP42) 0 0 0 0 0 688 Lactococcus cremoris_lactis (SPP50) 0 0 45 0 0 0 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum (SPP52) 0 0 1689 0 0 0 Hungatella effluvii_hathewayi (SPP53) 0 0 0 24 0 0 Bifidobacterium catenulatum_pseudocatenulatum (SPP54) 0 0 0 0 31 0 Staphylococcus argensis_pettenkoferi (SPP61) 0 0 0 101 0 0 Neisseria flava_macacae_mucosa_sicca (SPP68) 0 0 0 5 0 0 Acinetobacter_Prolinoborus fasciculus_lwoffii (SPP76) 0 0 2089 88 0 0 Haemophilus haemolyticus_sp._HMT_036 (SPP79) 0 0 461 0 0 15 Parvimonas_Peptostreptococcus Candidatus massiliensis_sp._HMT_110_sp._HMT_393 (SPP98) 0 0 1117 0 0 0 Enterococcus multispecies_sppn104_2_nov_96.360% (SPPN104) 0 0 130 0 0 0 Streptococcus multispecies_sppn13_18_nov_97.859% (SPPN13) 0 0 3 0 0 0 Streptococcus multispecies_sppn143_2_nov_97.849% (SPPN143) 0 0 2 24 0 0 Streptococcus multispecies_sppn171_17_nov_94.658% (SPPN171) 0 0 18 0 0 0 Streptococcus multispecies_sppn184_17_nov_97.634% (SPPN184) 0 0 39 0 0 0