Taxon F9928.S01 F9928.S02 F9928.S03 F9928.S04 F9928.S05 F9928.S06 F9928.S07 F9928.S08 F9928.S09 Schaalia sp._HMT_180 (SP100) 891 1220 107 1660 2383 2104 5014 4888 5417 Streptococcus anginosus (SP101) 0 0 0 0 93 0 101 0 0 Bifidobacterium longum (SP104) 0 0 0 140 0 0 0 0 0 Finegoldia magna (SP106) 0 0 0 0 19 0 0 0 0 Gemella haemolysans (SP108) 870 338 49 7329 94 2376 2728 6860 4741 Veillonella atypica (SP118) 0 0 0 1996 125 103 302 503 271 Solobacterium moorei (SP119) 1762 64 0 818 203 142 2210 6216 344 Gemella sanguinis (SP130) 5742 321 0 2590 5209 5138 4317 3226 1713 Schaalia sp._HMT_172 (SP131) 0 45 0 12527 10426 583 704 4609 1751 Rothia aeria (SP134) 38 61 0 701 2450 150 246 82 140 Granulicatella adiacens (SP135) 6720 9271 9811 2658 15715 16046 4222 5314 6889 Haemophilus parainfluenzae (SP136) 1437 92 589 1669 1275 2767 322 118 4671 Cutibacterium acnes (SP147) 0 3 0 42 26 0 0 0 0 Capnocytophaga sputigena (SP153) 123 22 3361 261 66 21 0 6 70 Veillonella dispar (SP156) 0 0 60 10738 1380 628 719 962 453 Gemella morbillorum (SP157) 171 23 0 223 3 130 195 286 242 Porphyromonas pasteri (SP159) 3060 233 61 2996 950 3628 0 2116 35 Rothia dentocariosa (SP183) 1315 2693 0 44 1036 47 2332 348 123 Bergeyella sp._HMT_931 (SP184) 0 0 0 0 0 7 0 0 600 Actinomyces oris (SP189) 204 0 0 856 941 539 851 409 3098 Prevotella melaninogenica (SP192) 255 20 371 4681 1167 1493 144 1479 111 Peptoniphilus coxii (SP194) 0 0 0 0 12 0 0 0 0 Schaalia odontolyticus (SP196) 197 0 71 0 47 27 0 336 984 Parvimonas micra (SP198) 765 186 0 343 261 0 508 104 1235 Veillonella parvula (SP2) 0 0 0 0 57 0 0 0 0 Streptococcus sanguinis (SP203) 0 2963 0 502 2373 0 17 0 879 Oribacterium sinus (SP206) 0 135 248 5066 292 1253 527 121 403 Peptostreptococcus stomatis (SP212) 754 1038 189 2445 1762 3136 858 4415 2786 Granulicatella elegans (SP217) 0 0 0 408 140 0 0 809 2655 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP219) 392 0 0 1342 17 402 1259 113 646 Streptococcus sp._HMT_074 (SP22) 6291 122 124717 17804 2159 36013 1319 7219 25406 Actinomyces sp._HMT_169 (SP222) 857 305 0 0 790 162 2025 85 1426 Fusobacterium periodonticum (SP226) 0 0 12 2821 405 130 0 0 204 Neisseria perflava (SP227) 0 23 0 5289 290 678 0 90 1099 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP228) 0 13 0 576 0 727 0 27 119 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP229) 809 698 0 3596 757 546 1013 842 689 Neisseria flavescens (SP238) 17 0 2086 277 0 315 45 0 329 Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP239) 0 124 0 95 896 0 27 0 251 Actinomyces massiliensis (SP244) 0 48 0 35 0 0 0 0 137 Prevotella histicola (SP265) 0 0 0 1211 239 0 0 272 0 Anaerococcus sp._HMT_294 (SP266) 0 0 0 0 0 0 0 0 2 Bifidobacterium dentium (SP288) 0 0 0 0 98 0 7 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP294) 41 116 0 649 287 0 101 1385 96 Stomatobaculum sp._HMT_097 (SP295) 1170 634 112 374 151 486 92 95 92 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP305) 0 46 0 88 0 8 0 169 232 Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP309) 123 122 0 184 310 64 962 134 1023 Capnocytophaga leadbetteri (SP312) 0 110 142 721 65 501 27 0 0 Leptotrichia sp._HMT_215 (SP342) 9 0 37 1411 398 0 4 107 122 Oribacterium parvum (SP353) 426 0 0 748 162 107 0 84 445 Porphyromonas endodontalis (SP354) 274 18 0 127 235 29 85 0 879 Actinomyces naeslundii (SP359) 130 0 0 126 0 354 273 0 0 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP365) 8 39 0 320 34 822 42 12 437 Leptotrichia sp._HMT_392 (SP370) 0 0 0 194 62 47 0 0 0 Veillonella rogosae (SP41) 59 77 100 501 90 1569 0 72 43 Corynebacterium durum (SP430) 191 0 0 273 233 51 341 151 119 Schaalia lingnae_[Not_Validly_Published] (SP44) 922 99 29 640 292 0 1377 4451 526 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP451) 91 87 0 793 75 200 442 110 253 Rothia mucilaginosa (SP51) 19218 46049 59052 19517 35509 30823 9257 34199 24329 Fusobacterium nucleatum (SP54) 0 0 0 198 0 137 0 0 490 Streptococcus parasanguinis_clade_411 (SP55) 7503 152 8086 3215 4291 6671 37953 5518 2582 Staphylococcus hominis (SP63) 0 0 0 0 0 9 0 0 0 Streptococcus lactarius (SP64) 0 1402 0 68 42 0 1667 0 7357 Streptococcus peroris (SP65) 154 0 0 958 2 0 202 693 178 Streptococcus sp._HMT_056 (SP68) 745 16 0 91 109 60 1975 362 80 Abiotrophia defectiva (SP79) 21 0 0 1888 6413 1920 0 404 141 Veillonella sp._HMT_780 (SP80) 0 0 0 59 0 0 0 8 5 Stenotrophomonas geniculata (SP82) 0 0 0 0 0 0 2 0 0 Lautropia mirabilis (SP87) 22 97 245 5181 415 358 0 0 360 Actinomyces graevenitzii (SP95) 0 12 0 6619 833 296 230 1567 429 Schaalia odontolytica (SP98) 3366 1423 7 692 4863 7062 135 8332 1515 Gemella haemolysans_nov_97.425% (SPN178) 95 0 0 129 0 83 136 162 196 Gemella haemolysans_nov_94.030% (SPN204) 712 7 0 439 116 311 458 559 641 Veillonella atypica_nov_96.137% (SPN27) 0 0 0 7 0 0 8 0 10 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346_nov_97.964% (SPN56) 0 0 0 0 53 0 0 0 25 Rothia mucilaginosa_nov_97.991% (SPN9) 0 0 0 9 58 64 0 4 0 Schaalia odontolyticus_sp._HMT_180 (SPP1) 0 0 0 1475 103 0 0 0 0 Streptococcus parasanguinis_clade_411_sinensis_sp._HMT_056 (SPP10) 0 5 0 14 89 0 449 102 10 Streptococcus australis_rubneri_sp._HMT_066 (SPP121) 4330 304 3378 1588 1993 3436 1648 1974 1039 Staphylococcus capitis_caprae (SPP141) 0 0 0 6 0 0 0 0 0 Staphylococcus capitis_caprae_epidermidis (SPP142) 11 2 0 0 0 0 0 0 0 Streptococcus cristatus_cristatus_clade_578 (SPP149) 7335 3231 34 1784 1732 1595 5526 2357 1667 Streptococcus lactarius_peroris (SPP155) 4921 101 4277 1294 749 1934 6010 2884 1890 Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(18 species) (SPP16) 6077 1623 38 1246 921 1286 2770 2363 1765 Streptococcus salivarius_vestibularis (SPP161) 0 595 27 830 3432 0 3353 2133 405 Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP17) 110108 75824 1641 50951 17413 20054 23564 48369 124867 Staphylococcus argenteus_aureus_roterodami_simiae (SPP180) 0 0 0 0 47 0 0 0 0 Streptococcus parasanguinis_clade_411_sp._HMT_057 (SPP33) 511 0 76 2790 19 53 1682 1805 295 Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP37) 0 0 0 38 0 0 0 0 649 Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP39) 2717 0 1632 604 1485 13514 8146 1871 169 Atopobium_Lancefieldella parvula_parvulum (SPP41) 797 280 106 447 1350 175 1230 21272 2673 Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum (SPP52) 0 0 0 213 0 0 0 0 0 Streptococcus australis_rubneri_sp._HMT_066_sp._HMT_074 (SPP56) 925 24 3414 510 172 2171 219 537 506 Haemophilus seminalis_sp._HMT_908 (SPP64) 0 0 0 61 0 0 0 0 214 Neisseria flava_macacae_mucosa_sicca (SPP68) 0 0 0 0 77 0 0 0 0 Acinetobacter_Prolinoborus fasciculus_lwoffii (SPP76) 0 4 0 0 0 0 0 0 0 Haemophilus haemolyticus_sp._HMT_036 (SPP79) 0 0 0 46 42 0 0 0 334 Streptococcus parasanguinis_clade_411_sinensis (SPP8) 93 0 0 0 0 0 552 9 2 Veillonella parvula_tobetsuensis (SPP85) 29 0 0 0 0 0 0 0 28 Veillonella parvula_rogosae_tobetsuensis (SPP87) 0 0 122 676 0 916 0 0 56 Lachnoanaerobaculum gingivalis_umeaense (SPP90) 166 415 18 1320 449 396 114 121 399 Parvimonas_Peptostreptococcus Candidatus massiliensis_sp._HMT_110_sp._HMT_393 (SPP98) 0 103 0 0 0 97 0 262 0 Enterococcus multispecies_sppn104_2_nov_96.360% (SPPN104) 935 835 792 263 496 1136 166 469 904 Schaalia multispecies_sppn109_2_nov_87.419% (SPPN109) 163 67 0 473 211 110 113 758 427 Streptococcus multispecies_sppn13_18_nov_97.859% (SPPN13) 0 15 0 0 14 0 9 42 0 Streptococcus multispecies_sppn143_2_nov_97.849% (SPPN143) 5 14 0 22 73 0 119 85 17 Streptococcus multispecies_sppn171_17_nov_94.658% (SPPN171) 743 714 693 84 444 744 216 438 832 Streptococcus multispecies_sppn184_17_nov_97.634% (SPPN184) 51 13 7 38 0 7 10 3 19 Streptococcus multispecies_sppn2_17_nov_94.658% (SPPN2) 0 0 0 5 12 53 0 0 289