taxon lfc: Saliva Baby.T0 vs. Saliva Mother lfc: Fecal Baby.T0 vs. Saliva Mother lfc: Fecal Baby.T0 vs. Saliva Baby.T0 se: Saliva Baby.T0 vs. Saliva Mother se: Fecal Baby.T0 vs. Saliva Mother se: Fecal Baby.T0 vs. Saliva Baby.T0 W: Saliva Baby.T0 vs. Saliva Mother W: Fecal Baby.T0 vs. Saliva Mother W: Fecal Baby.T0 vs. Saliva Baby.T0 p: Saliva Baby.T0 vs. Saliva Mother p: Fecal Baby.T0 vs. Saliva Mother p: Fecal Baby.T0 vs. Saliva Baby.T0 q: Saliva Baby.T0 vs. Saliva Mother q: Fecal Baby.T0 vs. Saliva Mother q: Fecal Baby.T0 vs. Saliva Baby.T0 diff: Saliva Baby.T0 vs. Saliva Mother diff: Fecal Baby.T0 vs. Saliva Mother diff: Fecal Baby.T0 vs. Saliva Baby.T0 Corynebacterium tuberculostearicum (SP1) 4.31128342398335 7.2744705326292 2.96318710864585 1.39629025297266 1.43665591862946 1.62773156525819 3.08766992736986 5.06347444666422 1.82043966701342 0.00201732399972013 4.11683586531553e-07 0.0686920763039575 0.0098156361777427 2.41480073890896e-06 0.265541011383955 TRUE TRUE FALSE Schaalia sp._HMT_180 (SP100) -4.86178942930586 -3.4494302941252 1.41235913518066 1.10169970288456 1.14363600311753 1.34870645610815 -4.41298968909254 -3.01619596158404 1.04719535432208 1.01952853826005e-05 0.00255967776030074 0.295009487501894 5.98021963486864e-05 0.0124545514904185 1 TRUE TRUE FALSE Streptococcus anginosus (SP101) 0.942634333790393 4.20916010685818 3.26652577306779 1.28247395556934 1.32341586403896 1.51944512712499 0.735012457521539 3.18052716552162 2.14981489936957 0.46233190727388 0.00147007355431499 0.031569859171155 1 0.00862296875889243 0.153608568504426 FALSE TRUE FALSE Bifidobacterium longum (SP104) 1.40997628794431 6.61458669585331 5.204610407909 1.62135613852079 1.66071803086818 1.84341830396137 0.86962774830622 3.98296795296153 2.82334747177279 0.384503868552209 6.80599361377087e-05 0.00475250334639887 1 0.000399217237345067 0.02312412076009 FALSE TRUE TRUE Finegoldia magna (SP106) 1.63188778166018 4.19779716334735 2.56590938168717 0.86835457859272 0.911483052017347 1.13038858261815 1.87928735782664 4.60545827380612 2.26993568507577 0.0602052669630804 4.11558506115671e-06 0.0232114855671402 0.232733793185639 2.41406705826058e-05 0.112939467087876 FALSE TRUE FALSE Gemella haemolysans (SP108) -0.223786929899601 -2.66290776937636 -2.43912083947676 1.74775825520291 1.78663070546156 1.96532056346038 -0.128042267420799 -1.49046345237217 -1.24108040429911 1 1 1 1 1 1 FALSE FALSE FALSE Collinsella aerofaciens (SP109) 1.95904766823423 8.22661131382456 6.26756364559033 1.51062380517902 1.55045731309193 1.73706207717153 1.29684681355995 5.30592570615117 3.60814027774749 0.194683899646658 1.12102612655143e-07 0.000308399738838021 0.752584029977378 6.57557116021961e-07 0.00150057186359992 FALSE TRUE TRUE Veillonella atypica (SP118) -1.88485001962774 0.0208977924446159 1.90574781207235 1.18193083612464 1.22341681856219 1.42428733348529 -1.59472108013347 0.0170814984129251 1.3380360600476 1 1 1 1 1 1 FALSE FALSE FALSE Solobacterium moorei (SP119) -3.69486951032514 -2.47784155564082 1.21702795468432 0.910719983285236 0.953675806186623 1.16992708002909 -4.05708623741477 -2.59820112827308 1.04025966699913 4.96887386157963e-05 0.00937135851753932 0.298219277219198 0.000291457825015044 0.045597953383848 1 TRUE TRUE FALSE Phocaeicola vulgatus (SP123) 1.95904766823423 6.77671051991044 4.81766285167622 1.15932838655409 1.20094024593956 1.40296308375945 1.68981255954334 5.64283738747439 3.43391989956469 0.0910638202303497 1.67270317212553e-08 0.000594919971009323 0.35202282745762 9.81152756187063e-08 0.00289468523207521 FALSE TRUE TRUE Gemella sanguinis (SP130) -4.58155840273108 -3.85551273780194 0.72604566492914 1.05544876874137 1.09764617598852 1.30527692441993 -4.34086289966934 -3.51252782740279 0.556238796033107 1.41924260264013e-05 0.000443865520453672 0.578047620891792 8.32481108712795e-05 0.00215970387564026 1 TRUE TRUE FALSE Schaalia sp._HMT_172 (SP131) -3.21726762821722 -2.52648394557673 0.690783682640486 1.26820788596085 1.30922515705587 1.50591376474964 -2.53686139617375 -1.92975511657459 0.458713970753386 1 1 1 1 1 1 FALSE FALSE FALSE Rothia aeria (SP134) -2.52536364309257 -1.48716212312315 1.03820151996942 0.826446419722469 0.869696988864818 1.09124206005829 -3.05568949520117 -1.70997731642636 0.951394340421557 0.00224543661649651 0.0872700677365383 0.341404232256359 0.0131709938848228 0.424627493762858 1 TRUE FALSE FALSE Granulicatella adiacens (SP135) -4.39534554827445 -4.4464035516003 -0.0510580033258492 1.44934418997553 1.48945707381741 1.67839888576179 -3.03264440474188 -2.98525122325571 -0.030420660880429 0.0024242107864418 0.00283345511317073 0.975731567480223 0.0142196244637556 0.0142196244637556 1 TRUE TRUE FALSE Haemophilus parainfluenzae (SP136) -2.4306323958018 -3.0998175779687 -0.669185182166895 1.2375337725369 1.27871526042615 1.47685199706606 -1.96409378858331 -2.4241656245939 -0.453115940863614 1 1 1 1 1 1 FALSE FALSE FALSE Stutzerimonas [Pseudomonas] urumqiensis (SP144) 3.65189473127017 6.45218897834413 2.80029424707396 1.48361716043506 1.52357214122703 1.71119055855847 2.4614805144201 4.23490874094597 1.63645961758518 0.0138364913494633 2.28644541646495e-05 0.101743430665009 0.0673238235809708 0.000134115380398615 0.393306694660259 FALSE TRUE FALSE Cutibacterium acnes (SP147) 3.31989480378935 4.9674567142273 1.64756191043795 1.5372477605747 1.57696403250592 1.76259383630795 2.15963547902533 3.1500126901015 0.934737133705765 0.0308008996013004 0.00163263370822873 0.349923784915712 0.149867063731701 0.00957649324378944 1 FALSE TRUE FALSE Corynebacterium amycolatum (SP150) 2.79742430707999 5.00199255506612 2.20456824798613 1.38051260141135 1.4209554044671 1.61268638451724 2.02636636870976 3.52016153310737 1.36701609758185 0.0427272546764186 0.000431284052071293 0.171620259881693 0.207896791410634 0.00252977063379132 0.663427571781469 FALSE TRUE FALSE Capnocytophaga sputigena (SP153) -1.91452710229975 -0.697499147615433 1.21702795468432 0.84564261766065 0.88884476332454 1.10918176162307 -2.26399079506662 -0.784725495829644 1.09723040604584 1 1 1 1 1 1 FALSE FALSE FALSE Acinetobacter baumannii (SP155) 1.95904766823423 6.26986805731756 4.31082038908333 1.15347246595373 1.19511709686085 1.39744241025486 1.69839135831857 5.24623743881354 3.08479287407424 0.0894339220304999 1.55236815134031e-07 0.0020369395247529 0.345722176207455 9.10568184293645e-07 0.0099110788816335 FALSE TRUE TRUE Veillonella dispar (SP156) -2.19216319063729 -1.00371384587969 1.18844934475759 1.36984851075136 1.41034395887503 1.60252342281401 -1.60029607174219 -0.711680182386367 0.74161121630952 1 1 1 1 1 1 FALSE FALSE FALSE Gemella morbillorum (SP157) -2.0485529293831 -0.831524974698779 1.21702795468432 0.798062817121948 0.841354997317271 1.06467061260836 -2.56690687178083 -0.988316438780495 1.14310279655666 1 1 1 1 1 1 FALSE FALSE FALSE Porphyromonas pasteri (SP159) -3.38511293086869 -2.15586265449389 1.2292502763748 1.09602380557535 1.13799219790286 1.34337137856454 -3.0885396043854 -1.89444414334896 0.915048731861708 0.00201142881841022 0.0581660818079125 0.36016604766817 0.0117983809796301 0.283017054766858 1 TRUE FALSE FALSE Lactobacillus gasseri (SP162) 2.97926332350695 3.57728872432346 0.598025400816511 0.934706092213105 0.977549489192179 1.1923169511036 3.18737980668655 3.65944513692052 0.501565796127432 0.00143568113905172 0.000252761948615951 0.615972984321479 0.00698555300493823 0.00148261859412043 1 TRUE TRUE FALSE Rothia dentocariosa (SP183) -2.17211277263532 -1.35168720648681 0.82042556614851 1.35936681877654 1.39991440929031 1.59253910194329 -1.59788567929756 -0.965549891848069 0.51516823991787 1 1 1 1 1 1 FALSE FALSE FALSE Bergeyella sp._HMT_931 (SP184) 1.60529383433901 2.24909342244394 0.643799588104926 0.955625563957634 0.998364738282634 1.21185333094214 1.67983559134902 2.25277730292516 0.5312520679416 1 1 1 1 1 1 FALSE FALSE FALSE Parabacteroides distasonis (SP186) 1.95904766823423 5.48733044245613 3.5282827742219 1.01564099855896 1.05806024554728 1.26797472177591 1.92887808882648 5.18621738747761 2.78261286572042 0.0537459985670538 2.14608288173139e-07 0.00539231061361137 0.207764382520402 1.2588217500305e-06 0.0262372128363777 FALSE TRUE TRUE Actinomyces oris (SP189) -2.59670145177998 -0.0363661038944038 2.56033534788558 1.42284407191845 1.46308194653845 1.65307635470353 -1.82500774542272 -0.0248558216308003 1.5488306638714 1 1 1 1 1 1 FALSE FALSE FALSE Prevotella melaninogenica (SP192) -3.9921209023752 -2.11463618649927 1.87748471587593 0.963815494941776 1.00651260500601 1.21950485179908 -4.14199701428993 -2.10095350617754 1.53954673743706 3.44294826454894e-05 0.035645047797707 0.123670877039041 0.000201952039995184 0.173437098239589 0.478071002285248 TRUE FALSE FALSE Bacteroides thetaiotaomicron (SP193) 1.95904766823423 5.8994026736847 3.94035500545047 1.11754473367696 1.1593915041561 1.36360823899949 1.75299261783333 5.08836113818064 2.88965326899287 0.0796032742405137 3.61171095306236e-07 0.00385666949703857 0.307720119825269 2.1185110515724e-06 0.0187652874035011 FALSE TRUE TRUE Schaalia odontolyticus (SP196) -1.30768623515568 -0.0906582804713616 1.21702795468432 0.935091840622238 0.977933362834571 1.19267710664561 -1.39845754004816 -0.0927039447847302 1.02041696608665 1 1 1 1 1 1 FALSE FALSE FALSE Parvimonas micra (SP198) -2.62557143818914 -1.40854348350482 1.21702795468432 0.942508336751111 0.985313452314072 1.19960215333066 -2.78572754829911 -1.4295384683897 1.01452631716713 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sanguinis (SP203) -0.957547735624104 0.337811512194319 1.29535924781842 1.40972662773779 1.45002731164977 1.64055248088744 -0.679243561683087 0.232969068568767 0.789587204865103 1 1 1 1 1 1 FALSE FALSE FALSE Stenotrophomonas maltophilia (SP204) 3.70727865424045 5.02475358136866 1.3174749271282 1.47728517624818 1.51726901293044 1.7051287721144 2.50952132590657 3.31170908951992 0.772654211619749 0.0120894915472817 0.000927279168147426 0.439727051831521 0.0588234961852813 0.00543911512062595 1 FALSE TRUE FALSE Oribacterium sinus (SP206) -3.46550652825624 -2.24847857357192 1.21702795468432 0.853027871568533 0.89620782640876 1.11607927110662 -4.0625947214174 -2.50888076104168 1.09044938490579 4.85302449571058e-05 0.0121114359957001 0.275515237804785 0.000284662481614068 0.0589302706656451 1 TRUE FALSE FALSE Peptostreptococcus stomatis (SP212) -4.58881564769609 -3.34462372278282 1.24419192491327 1.06151327594523 1.10367655774014 1.31096583278463 -4.32289991249518 -3.03043831032452 0.949065104366962 1.53991604290862e-05 0.00244199067222456 0.342587500967476 9.03264186362815e-05 0.0118819247633613 1 TRUE TRUE FALSE Granulicatella elegans (SP217) 0.282133666409135 0.555298034174913 0.273164367765777 1.33276872504404 1.37345038720377 1.56722485814772 0.211689891207352 0.404308768156854 0.174298133637713 1 1 1 1 1 1 FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP219) -2.52307499249207 -1.30604703780775 1.21702795468432 0.984781750934812 1.02736856203608 1.23910214315349 -2.56206513788158 -1.27125462669343 0.982185335897335 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sp._HMT_074 (SP22) -4.13854824478142 -4.76256005593509 -0.624011811153676 1.41509619616406 1.45537109410631 1.64567820979058 -2.92457025607156 -3.27240253377411 -0.379182155685883 0.00344932207242403 0.00106637632773618 0.704552601609856 0.0167832685911975 0.00625501338507936 1 TRUE TRUE FALSE Actinomyces sp._HMT_169 (SP222) -2.88006164431065 -1.66303368962633 1.21702795468432 0.998575603844343 1.04108815825115 1.25200353219015 -2.88416984474977 -1.59739948672545 0.972064314032206 0.00392447027803399 0.110176686812674 0.331018554084153 0.0230196540189158 0.536083580610921 1 TRUE FALSE FALSE Fusobacterium periodonticum (SP226) -0.317646183114195 0.218376192674508 0.536022375788703 1.20615117498577 1.2475035301796 1.44716573885784 -0.26335519933307 0.175050560893457 0.370394600560232 1 1 1 1 1 1 FALSE FALSE FALSE Neisseria perflava (SP227) -0.00723104073646566 0.0955948984616464 0.102825939198112 1.51282307620707 1.55264680565935 1.73917012817861 -0.00477983238766772 0.0615689918101181 0.0591235656202299 0.996186260056617 0.950906071027733 0.952853688820342 1 1 1 FALSE FALSE FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP228) -0.66150164896653 0.555526305717788 1.21702795468432 0.964964786240259 1.00765594352133 1.2205787430493 -0.685518951985703 0.551305541628089 0.997090897752234 1 1 1 1 1 1 FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP229) -4.10264904666571 -2.88562109198139 1.21702795468432 0.852576270346329 0.89575763375687 1.1156575494192 -4.81206103120739 -3.22143064511646 1.09086157783622 1.49381717714423e-06 0.00127552329668809 0.275333795907618 8.76224105399529e-06 0.00620627753313906 1 TRUE TRUE FALSE Neisseria flavescens (SP238) -0.928448689991382 0.171999316544211 1.10044800653559 1.21157627405388 1.25289889881482 1.45229418090426 -0.766314684328401 0.137281082062498 0.757730782788381 1 1 1 1 1 1 FALSE FALSE FALSE Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP239) -0.817995517912066 0.399032436772253 1.21702795468432 0.964294180397182 1.00698881253593 1.21995212799917 -0.848284200548781 0.396263028749404 0.997603042572133 1 1 1 1 1 1 FALSE FALSE FALSE Actinomyces massiliensis (SP244) 0.587211001764734 2.67512216934075 2.08791116757602 1.10481001667606 1.14672873371522 1.351630660075 0.531504053096315 2.33282910830514 1.54473498511802 1 1 1 1 1 1 FALSE FALSE FALSE Prevotella histicola (SP265) 0.418605529540416 1.1559125827207 0.737307053180284 1.07307534179024 1.11517342654448 1.32181647464183 0.390098917790847 1.03653167768036 0.557798353496897 1 1 1 1 1 1 FALSE FALSE FALSE Anaerococcus sp._HMT_294 (SP266) 1.88203131483868 3.73169617383441 1.84966485899573 0.658136937145081 0.700443930632101 0.930872192985523 2.85963483982939 5.32761583138684 1.98702343128698 0.00424129067479342 9.9510318473298e-08 0.0469198003233629 0.0206367277609352 5.8369485313442e-07 0.181376541548522 TRUE TRUE FALSE Corynebacterium kroppenstedtii (SP284) 3.09695581692567 4.67712697694113 1.58017116001545 1.11470108455076 1.15656391235716 1.36093297844205 2.77828366711761 4.04398488226111 1.16109403258372 0.0054646888278763 5.25503091787319e-05 0.245603661249175 0.02658938146101 0.000308242858317039 0.949423108410992 TRUE TRUE FALSE Bifidobacterium dentium (SP288) 1.23339459848691 3.26068223941277 2.02728764092586 0.992734468198247 1.03527860945021 1.24653947629467 1.2424214510507 3.14956979662159 1.62633248242724 0.21408110514481 0.00163511045415322 0.103878945336867 0.827567257201578 0.00959102102212262 0.505440838504757 FALSE TRUE FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP294) -2.15373025589965 -0.936702301215335 1.21702795468432 0.908456579523186 0.95142254421129 1.16781467750476 -2.37075750723283 -0.984528175114709 1.04214134153949 1 1 1 1 1 1 FALSE FALSE FALSE Stomatobaculum sp._HMT_097 (SP295) -3.48100846036052 -2.2639805056762 1.21702795468432 0.990100082373214 1.03265840294394 1.24407556452224 -3.51581473664434 -2.19238084851871 0.978258868987344 0.000438406786869227 0.0283520183193335 0.327946307202209 0.00257155025730756 0.137951611523921 1 TRUE FALSE FALSE Corynebacterium pilbarense (SP298) 3.44726733953168 3.84747927110548 0.4002119315738 1.0829042487107 1.12494681330383 1.33104547793466 3.18335378555951 3.42014326864567 0.300674874155912 0.00145579618049182 0.000625881638269279 0.763662430209091 0.00708342619164677 0.00367121617671383 1 TRUE TRUE FALSE Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP305) -0.370069647236499 1.54075462974379 1.91082427698029 1.06272383557916 1.10488029883236 1.31210161788688 -0.348227483798573 1.39449914291354 1.45630814788388 1 1 1 1 1 1 FALSE FALSE FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP309) -2.86583517122375 -1.40467115239096 1.46116401883279 0.811163060440106 0.854441055054243 1.07694291577447 -3.53299516581642 -1.64396495706985 1.35677016620887 0.000410879984676782 0.100183441088693 0.174854249730753 0.00241008707429814 0.487459728282296 0.675929114630819 TRUE FALSE FALSE Capnocytophaga leadbetteri (SP312) -1.36581642039505 -0.148788465710728 1.21702795468432 0.937087884764508 0.979919675674967 1.19454076934954 -1.45751155532043 -0.151837410151238 1.0188249626231 1 1 1 1 1 1 FALSE FALSE FALSE Leptotrichia sp._HMT_215 (SP342) -1.36426263036941 -0.147234675685095 1.21702795468432 0.915455726788041 0.95839005014378 1.17434704111117 -1.49025517067445 -0.153627091248502 1.03634437868789 1 1 1 1 1 1 FALSE FALSE FALSE Oribacterium parvum (SP353) -1.70330328453774 -0.486275329853422 1.21702795468432 0.975963856012969 1.01859747421575 1.23085826501288 -1.74525242307242 -0.477396952341574 0.988763685696649 1 1 1 1 1 1 FALSE FALSE FALSE Porphyromonas endodontalis (SP354) -1.75161949277121 -0.534591538086895 1.21702795468432 0.869081646353965 0.912207510383038 1.13106725541243 -2.01548324040639 -0.586041588127704 1.07599963561896 1 1 1 1 1 1 FALSE FALSE FALSE Actinomyces naeslundii (SP359) -0.394572894624195 1.49118763944859 1.88576053407279 1.13215121446934 1.1739156159539 1.37735597741592 -0.348516072395098 1.27026816849769 1.36911631052032 1 1 1 1 1 1 FALSE FALSE FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP365) -1.82450061692606 -0.453439955450641 1.37106066147542 0.81725362888071 0.860522001252301 1.08264334422593 -2.23247784096701 -0.526935923533342 1.26640104406285 1 1 1 1 1 1 FALSE FALSE FALSE Leptotrichia sp._HMT_392 (SP370) 0.487365429809951 2.49273387085951 2.00536844104956 1.08248470391739 1.12452963958078 1.33065144742224 0.45022846793699 2.21669023485124 1.50705764829279 1 1 1 1 1 1 FALSE FALSE FALSE Bacteroides stercoris (SP400) 1.95904766823423 4.75795079779678 2.79890312956255 0.863229142301471 0.906375596607813 1.12560401036214 2.2694410698545 5.24942509000001 2.48657885348334 0.0232415170468091 1.52574627264009e-07 0.0128977982795671 0.0898440733600532 8.94952664399339e-07 0.0627564513304311 FALSE TRUE FALSE Veillonella rogosae (SP41) -1.21090358240027 -1.17270091159315 0.0382026708071157 1.04743503310394 1.08967743465091 1.29776205082112 -1.15606557364413 -1.07619087475079 0.0294373462245594 1 1 1 1 1 1 FALSE FALSE FALSE Corynebacterium durum (SP430) -1.54860011215771 -0.809801612273854 0.738798499883855 0.950502548761132 0.993267698108774 1.20706804098819 -1.62924351352464 -0.815290393330773 0.612060360142599 1 1 1 1 1 1 FALSE FALSE FALSE Schaalia lingnae_[Not_Validly_Published] (SP44) -2.64133569402881 -1.46659138242541 1.1747443116034 1.23036231305038 1.27158260323011 1.47006398523651 -2.146795026158 -1.15335911225896 0.799111007004501 1 1 1 1 1 1 FALSE FALSE FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP451) -2.66246078326447 -1.44543282858015 1.21702795468432 0.747865825344293 0.791104634367597 1.01742889110661 -3.56007814909681 -1.82710701693161 1.19617986605493 0.000370744445390459 0.0676836804328503 0.231626376112493 0.00217466517967837 0.329326564494167 0.89539151362889 TRUE FALSE FALSE Rothia mucilaginosa (SP51) -3.69904600846083 -3.55235689215027 0.146689116310565 1.74062052930522 1.77951931274372 1.95842405430702 -2.12513063369265 -1.99624520324712 0.0749016108068944 1 1 1 1 1 1 FALSE FALSE FALSE Enterococcus faecalis (SP53) 2.36611007335975 10.0367686779347 7.67065860457491 1.21884085436513 1.26012379074903 1.45916375602324 1.94127893308286 7.96490690170108 5.25688674277402 0.0522244534141057 1.65348216435081e-15 1.46514478778389e-07 0.201882588570946 9.69878344163983e-15 7.12891344503802e-07 FALSE TRUE TRUE Fusobacterium nucleatum (SP54) 1.24271956560709 2.37581303275136 1.13309346714428 1.39190028296471 1.43228732108805 1.62354433215191 0.892822266664197 1.65875449553414 0.697913475292927 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus parasanguinis_clade_411 (SP55) -3.42567420442278 -2.88027388919547 0.545400315227314 1.6527268150089 1.69196255061746 1.87362554748114 -2.07274074173252 -1.70232721057825 0.291093551729448 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus capitis (SP56) 3.63695936542252 4.51061971464632 0.873660349223803 1.4132889326601 1.45357249787313 1.64395288247482 2.57340115058922 3.10312675924062 0.531438801280354 0.0100704409235566 0.00191487603624152 0.595114739471005 0.0489994588220812 0.0112320340633271 1 TRUE TRUE FALSE Staphylococcus hominis (SP63) 7.997002216248 4.5746603048548 -3.4223419113932 1.79802463152108 1.83671582825895 2.01392900882592 4.44765999088831 2.49067397061154 -1.69933592316065 8.68107965435782e-06 0.0127501058156428 0.0892559076708161 5.09203627486959e-05 0.0620378282970084 0.345034031145394 TRUE FALSE FALSE Streptococcus lactarius (SP64) -0.795180535736355 0.576143422334099 1.37132395807045 1.55659668189861 1.5962292999503 1.78116528802596 -0.510845580607597 0.360940262374609 0.769902696447825 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus peroris (SP65) -1.33273331041329 0.00636267634526444 1.33909598675855 1.02973944589319 1.07208066778849 1.28117803628098 -1.29424323378938 0.00593488581264085 1.04520679315242 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus sp._HMT_056 (SP68) -1.67817211962899 -1.32887097879505 0.349301140833939 0.96969078784719 1.01235734517695 1.22499511114221 -1.73062603116473 -1.31265010831009 0.285144926421986 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus haemolyticus (SP75) 6.8186712199111 8.29621209403444 1.47754087412334 1.97362825203402 2.01173982373675 2.184254784188 3.45489137221448 4.12389912261341 0.67645078990756 0.000550514575912867 3.72512092227302e-05 0.4987544797489 0.00267862316041186 0.000218503361560194 1 TRUE TRUE FALSE Abiotrophia defectiva (SP79) -1.40789585747134 -1.03105031896355 0.376845538507787 1.36653957037107 1.40705143668558 1.59937097865876 -1.03026351230286 -0.732773722467654 0.235621093252431 1 1 1 1 1 1 FALSE FALSE FALSE Veillonella sp._HMT_780 (SP80) 2.31630057194611 3.56249116043078 1.24619058848467 1.16379624803872 1.20538314513043 1.40717629466624 1.99029733585207 2.95548446551846 0.88559663292242 0.0465581913244626 0.00312178417710572 0.375834926629309 0.22653687122052 0.018311360919441 1 FALSE TRUE FALSE Stenotrophomonas geniculata (SP82) 4.30364737182773 6.94939975419836 2.64575238237063 1.63788104154935 1.67717608176901 1.85932635262498 2.62757017307966 4.14351231796034 1.42296288041923 0.00859971024413542 3.42026690531149e-05 0.154746916106231 0.0418433662625097 0.00020062162593842 0.598200765246475 TRUE TRUE FALSE Lautropia mirabilis (SP87) -1.84057017103895 -0.91354997110374 0.927020199935207 1.12638547962016 1.16818237045676 1.37192798066846 -1.63404998052676 -0.782026842903424 0.675706168980915 1 1 1 1 1 1 FALSE FALSE FALSE Lawsonella clevelandensis (SP89) 3.10755520464281 5.28666418506311 2.1791089804203 1.2124396687881 1.25375756915884 1.45311049518147 2.56305965949547 4.21665584727835 1.49961684789027 0.0103754218443591 2.47951945516972e-05 0.133713680941656 0.0504833958397175 0.000145440469534582 0.516893184535654 FALSE TRUE FALSE Bifidobacterium breve (SP90) 1.95904766823423 4.41878911158501 2.45974144335078 0.740494865745255 0.783707011545082 1.01044955570798 2.6455925069279 5.63831769588657 2.43430404759527 0.00815479862840642 1.71719483752222e-08 0.0149204560747278 0.0396785724307536 1.00725010618841e-07 0.0576775839306644 TRUE TRUE FALSE Actinomyces graevenitzii (SP95) -1.91705883683215 -1.55219702114869 0.364861815683464 1.2915792712462 1.33247342870346 1.52808649205254 -1.48427501084192 -1.16489904242145 0.23877039524993 1 1 1 1 1 1 FALSE FALSE FALSE Schaalia odontolytica (SP98) -4.45356609047363 -2.05217052068293 2.4013955697907 1.37330136620149 1.41377972396431 1.6058134826314 -3.2429634165384 -1.45154898312485 1.49543866443044 0.00118293399252796 0.146627052926446 0.13479999615821 0.00693870237408192 0.655892518620542 0.655892518620542 TRUE FALSE FALSE Peptoniphilaceae_[G-3] bacterium_HMT_929_nov_88.739% (SPN102) 2.37951318311403 3.78222241351385 1.40270923039981 0.774420059523934 0.817711423322611 1.04247176363134 3.07263887841027 4.6253755366967 1.34556088647775 0.00212175078873923 3.73920291136268e-06 0.17844417294229 0.0103237426437162 2.19329364800826e-05 0.689806578985866 TRUE TRUE FALSE Gemella haemolysans_nov_97.425% (SPN178) 0.499196710278214 -0.0584683530767625 -0.557665063354976 1.20808487345637 1.24942662283226 1.44899353401422 0.413213277681388 -0.0467961479356217 -0.384863734905736 1 1 1 1 1 1 FALSE FALSE FALSE Enterococcus faecalis_nov_96.788% (SPN18) 1.95904766823423 4.32782128896998 2.36877362073575 0.741235812672814 0.784450908637999 1.01115178302225 2.64294794549945 5.51700717191359 2.34264890841183 0.00821876697636477 3.44821367679397e-08 0.0191473915729244 0.0399898214073868 2.02260891788064e-07 0.0740175286177229 TRUE TRUE FALSE Gemella haemolysans_nov_94.030% (SPN204) -0.388865889082568 -1.7136931205279 -1.32482723144533 1.28774588609842 1.32866011343028 1.52444796219677 -0.301974087652297 -1.28979044618384 -0.869053758670924 1 1 1 1 1 1 FALSE FALSE FALSE Veillonella atypica_nov_96.137% (SPN27) 1.25594358115321 2.47297153583752 1.21702795468432 0.997319493184787 1.03983885675362 1.25082840405235 1.2593191948375 2.37822574120586 0.972977548911961 1 1 1 1 1 1 FALSE FALSE FALSE Enterococcus faecalis_nov_89.507% (SPN36) 1.95904766823423 4.21203885150557 2.25299118327134 0.73906387769391 0.782270148873182 1.00909291816511 2.65071494814091 5.3843788588543 2.23268952017629 0.00803215993966407 7.26952433405277e-08 0.0255694260268089 0.0390818528407535 4.26406427355633e-07 0.0988430050887091 TRUE TRUE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346_nov_97.964% (SPN56) 1.79547655301044 3.13805066749244 1.342574114482 1.11239798300816 1.15427381976872 1.3587665434444 1.61405951865814 2.71863626615149 0.988082994065078 1 1 1 1 1 1 FALSE FALSE FALSE Rothia mucilaginosa_nov_97.991% (SPN9) 0.846704827885989 2.95458135589347 2.10787652800748 0.981888989178446 1.02449121714637 1.236397400654 0.862322357433128 2.88394991235083 1.70485357450001 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus parasanguinis_clade_411_sinensis_sp._HMT_056 (SPP10) 0.538058758961124 1.49315117427475 0.955092415313631 1.1091453838233 1.15103959796889 1.35570739075306 0.485111119613912 1.2972196411918 0.704497461493594 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus australis_rubneri_sp._HMT_066 (SPP121) -4.15686570556802 -4.17588176572462 -0.0190160601565994 1.00262701376301 1.04511754742225 1.25579414978594 -4.14597417435093 -3.99560965752065 -0.0151426570667182 3.38371966768559e-05 6.45279799268796e-05 0.987918369438473 0.00019847788498514 0.00031397196203228 1 TRUE TRUE FALSE Staphylococcus capitis_caprae (SPP141) 1.75996328276444 5.6176444526123 3.85768116984785 1.14261886652013 1.18432438576764 1.38721461614089 1.54028901003923 4.74333258701849 2.78088273073389 0.123489921436023 2.10230690409143e-06 0.00542113159933155 0.477371487342237 1.23314419896706e-05 0.0263774462892848 FALSE TRUE TRUE Staphylococcus capitis_caprae_epidermidis (SPP142) 8.29721323014449 10.2498837321802 1.95267050203567 1.74478656456247 1.78366995997513 1.96244912134447 4.75543163769441 5.74651362762373 0.995017134863556 1.9802286271727e-06 9.11022917770945e-09 0.319727930690324 9.63514227549703e-06 5.34376129379077e-08 1 TRUE TRUE FALSE Enterobacter asburiae_cancerogenus_cloacae_hormaechei (SPP148) 1.95904766823423 6.64136577307699 4.68231810484276 1.38616348272182 1.42657855521379 1.61807370400082 1.41328760471133 4.65545044736894 2.89376070649028 0.15757117707005 3.23273152608149e-06 0.00380658137954737 0.609118430763328 1.89621416380601e-05 0.0185215750706334 FALSE TRUE TRUE Streptococcus cristatus_cristatus_clade_578 (SPP149) -2.12793292373575 -3.02605053332487 -0.898117609589126 1.31898860497219 1.35974070755127 1.55412232950994 -1.61330652570771 -2.22546145490814 -0.577893768421904 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus lactarius_peroris (SPP155) -2.07188815792548 -3.16566443888712 -1.09377628096164 1.29002703565886 1.33092931401823 1.5266130760864 -1.60608119105604 -2.37853686559027 -0.716472495942214 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus cristatus_cristatus_clade_578_downii_gwangjuense_i ...(18 species) (SPP16) -2.70448546086799 -3.38102330501657 -0.676537844148578 1.19973573709014 1.24112334791172 1.44110296112471 -2.25423430948843 -2.72416380749373 -0.469458367929917 0.0241814314455464 0.00644645244494948 0.638742036189976 0.117658905242509 0.0378127732964947 1 FALSE TRUE FALSE Streptococcus salivarius_vestibularis (SPP161) 0.618326371886299 0.999360374647113 0.381034002760813 1.91962253315264 1.95790398006971 2.1317925207493 0.322108310986956 0.510423588092164 0.178738783935166 1 1 1 1 1 1 FALSE FALSE FALSE Escherichia_Shigella coli_fergusonii_flexneri_sonnei (SPP165) 3.76568116352177 9.82619807653739 6.06051691301561 1.64499884127198 1.68426535936247 1.86618120636041 2.28916949303745 5.83411516594797 3.24755007303678 0.0220695063787407 5.40767623899855e-09 0.00116403179968974 0.0853134649566247 3.1719653163081e-08 0.00566379651789336 FALSE TRUE TRUE Streptococcus cristatus_downii_gwangjuense_infantis_infantis_cla ...(17 species) (SPP17) 0.0700337571482705 -3.03998355665769 -3.11001731380596 1.64078700572598 1.68007038152738 1.86212476584394 0.0426830276592077 -1.80943821763823 -1.67014443438566 1 1 1 1 1 1 FALSE FALSE FALSE Staphylococcus argenteus_aureus_roterodami_simiae (SPP180) 2.95635874294495 2.74828144495076 -0.208077297994186 1.07315256134927 1.11525021019588 1.32188896356633 2.75483547206739 2.46427341579973 -0.157409059103431 0.005872165606681 0.013729133775405 0.874922474327626 0.0344441952750094 0.0668014568773436 1 TRUE FALSE FALSE Bacillus inaquosorum_spizizenii_subtilis_tequilensis (SPP182) 3.25860841289364 6.14641002483208 2.88780161193844 1.38628961759445 1.42670407241858 1.61819397144855 2.35059714184985 4.30811837132599 1.78458309874518 0.0187433144844434 1.64649266219432e-05 0.0743289648698297 0.0911988137601275 9.65778531705028e-05 0.287331371660983 FALSE TRUE FALSE Bifidobacterium adolescentis_faecale (SPP25) 2.17525990701815 5.14352131780601 2.96826141078786 1.05690093408031 1.09909017524729 1.30663899971945 2.05814928994364 4.67979919541065 2.27167673047044 0.0395758047167984 2.87156024133727e-06 0.0231060426465923 0.152987065994788 1.68436294753067e-05 0.112426416459539 FALSE TRUE FALSE Streptococcus parasanguinis_clade_411_sp._HMT_057 (SPP33) -2.06533943094342 -1.49296077490715 0.572378656036272 1.17601913895046 1.21753794345734 1.41870753200808 -1.75621243102101 -1.22621293482461 0.403450776937873 1 1 1 1 1 1 FALSE FALSE FALSE Fusobacterium nucleatum_nucleatum_subsp._vincentii (SPP37) 0.835378904186397 2.85086733715097 2.01548843296458 1.10575715291241 1.14767051622383 1.35252121545022 0.755481347768022 2.48404685565258 1.49017139985761 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus parasanguinis_parasanguinis_clade_721_sp._HMT_066 (SPP39) -2.08733179509274 -2.17477335507235 -0.0874415599796081 1.59036605468475 1.62985574299717 1.81360963352479 -1.31248512815278 -1.33433487252873 -0.048214102066531 1 1 1 1 1 1 FALSE FALSE FALSE Atopobium_Lancefieldella parvula_parvulum (SPP41) -4.42199995842304 -3.38379843845362 1.03820151996942 0.719488199479024 0.762588428259148 0.990470718029319 -6.14603542021256 -4.43725384894473 1.04819001821181 7.94435507154701e-10 9.11138204610637e-06 0.294551068530902 4.65989782554922e-09 4.43329932392639e-05 1 TRUE TRUE FALSE Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum (SPP52) 1.36334853871096 3.88586316343351 2.52251462472255 1.04343374060765 1.08569855782951 1.29401091113635 1.30659809593372 3.57913634075557 1.94937662659072 0.191349243644958 0.000344731594085873 0.0512504637253896 0.739693344836478 0.00202208233545893 0.249367927977269 FALSE TRUE FALSE Streptococcus australis_rubneri_sp._HMT_066_sp._HMT_074 (SPP56) -3.14581487188214 -2.9472513034412 0.19856356844094 0.94065135815213 0.983465652446875 1.19786811440018 -3.34429418999826 -2.99680146033408 0.165764132172738 0.000824922106541932 0.00272828335871505 0.868342573928505 0.00483872220702954 0.0132749309692702 1 TRUE TRUE FALSE Staphylococcus argensis_pettenkoferi (SPP61) 2.97834504463474 4.54196273597627 1.56361769134153 1.19225507562739 1.23368392538179 1.43403605130579 2.49807705206663 3.68162593556583 1.09036149399295 0.012486904925498 0.000231751265656027 0.275553936777503 0.0607571791897366 0.00135937682690774 1 FALSE TRUE FALSE Haemophilus seminalis_sp._HMT_908 (SPP64) 1.84839146596156 2.12309230300797 0.274700837046417 1.15184574588351 1.19349949078025 1.39590911712953 1.60472135489268 1.77887994038438 0.196789915385965 1 1 1 1 1 1 FALSE FALSE FALSE Neisseria flava_macacae_mucosa_sicca (SPP68) 2.87092060472308 2.87225701076081 0.00133640603773699 1.07533911219038 1.11742441575992 1.32394167673135 2.6697816271885 2.57042621429342 0.0010094145846639 0.00759005920808868 0.0101573461894378 0.99919460382422 0.0445207950564008 0.049422311309802 1 TRUE TRUE FALSE Acinetobacter_Prolinoborus fasciculus_lwoffii (SPP76) 2.46989677040837 5.11080525360322 2.64090848319484 1.22890957006585 1.27013773865291 1.4686892199857 2.0098279243411 4.02381969928999 1.79813976112697 0.0444494042306419 5.72617620472584e-05 0.0721548626834002 0.216276205659541 0.00033587869379959 0.278927006492547 FALSE TRUE FALSE Haemophilus haemolyticus_sp._HMT_036 (SPP79) 0.472664111817653 3.1392632735564 2.66659916173874 1.08914507195398 1.13115235823673 1.33690775065449 0.433977184480733 2.77527890093422 1.9946022157724 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus parasanguinis_clade_411_sinensis (SPP8) 0.432767746309059 1.64979570099338 1.21702795468432 0.859438209613185 0.902597480142886 1.12206481329359 0.503547249201125 1.82783105125909 1.08463249205006 1 1 1 1 1 1 FALSE FALSE FALSE Lactobacillus crispatus_gallinarum (SPP83) 3.47107956897668 3.17607562291855 -0.29500394605813 0.953993825632759 0.996741302637484 1.21032908662805 3.63847173400142 3.18645932953146 -0.243738623914265 0.000274260722392799 0.00144025735747934 0.807433257749952 0.00160872334179657 0.00700781938116811 1 TRUE TRUE FALSE Veillonella parvula_rogosae_tobetsuensis (SPP87) 0.270835049183147 0.713233158897933 0.442398109714786 1.22693622755917 1.26817510748148 1.46682196207651 0.220740934287952 0.562409051155698 0.301603140089684 1 1 1 1 1 1 FALSE FALSE FALSE Lachnoanaerobaculum gingivalis_umeaense (SPP90) -3.46599817531485 -2.24897022063053 1.21702795468432 1.01320795140044 1.05564058485232 1.26569697666737 -3.42081620117982 -2.13043175196335 0.96154765091468 0.000624335109185822 0.0331359847168308 0.336276878403091 0.00366214474492579 0.161228821159505 1 TRUE FALSE FALSE Parvimonas_Peptostreptococcus Candidatus massiliensis_sp._HMT_110_sp._HMT_393 (SPP98) 0.861276038173871 2.31392199276022 1.45264595458635 1.21589700214331 1.25719600440205 1.45637966464509 0.708346214075422 1.84054195579533 0.997436307201087 1 1 1 1 1 1 FALSE FALSE FALSE Enterococcus multispecies_sppn104_2_nov_96.360% (SPPN104) -3.12686099116716 -2.21779677754511 0.909064213622052 1.08116301314291 1.12321541780993 1.32941018831166 -2.89212723072856 -1.97450706461047 0.68381017507964 0.00382642956235149 0.0483241149422025 0.494095040580342 0.022444579373196 0.235129275688926 1 TRUE FALSE FALSE Schaalia multispecies_sppn109_2_nov_87.419% (SPPN109) -2.50230157657708 -1.3374962473645 1.16480532921257 0.842071990662513 0.885284195328674 1.10584619879174 -2.97160053335624 -1.51081003639508 1.05331585032824 0.00296251864055643 0.130836856891373 0.292196256816418 0.0173771615781892 0.636609184277429 1 TRUE FALSE FALSE Streptococcus multispecies_sppn13_18_nov_97.859% (SPPN13) 1.59901799991761 2.044587907622 0.445569907704382 0.868332114864551 0.91146066868184 1.13036761396366 1.84148204649443 2.24319927109844 0.394181416912663 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus multispecies_sppn143_2_nov_97.849% (SPPN143) 0.694412859200134 0.97454404299563 0.280131183795496 0.973382765964383 1.01602997524466 1.22844568417896 0.713401637548145 0.959168594175539 0.22803709386852 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus multispecies_sppn171_17_nov_94.658% (SPPN171) -2.99652219561803 -2.49655072315628 0.499971472461745 0.936102887516503 0.97893948690573 1.19362108882005 -3.20106073336431 -2.5502605181935 0.41886950318211 0.00136922668717831 0.0107642449094048 0.675311506191675 0.00803143415016532 0.0523752812009844 1 TRUE FALSE FALSE Streptococcus multispecies_sppn184_17_nov_97.634% (SPPN184) 2.63991265355893 1.31960271594945 -1.32030993760947 1.07120498948955 1.113313630799 1.32006078862571 2.46443274579676 1.18529287654765 -1.00018874053824 1 1 1 1 1 1 FALSE FALSE FALSE Streptococcus multispecies_sppn2_17_nov_94.658% (SPPN2) 0.840436388483447 1.65040193804225 0.809965549558802 0.877848768094365 0.920942077745315 1.13925016838106 0.957381748462058 1.79208006445185 0.710963730389269 1 1 1 1 1 1 FALSE FALSE FALSE