QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Campylobacter sp._Oral_Taxon_E65 (SP63) 26
multigenus multispecies_spp36_2 (SPP36) 6
Selenomonas sp. HMT481 nov_96.786% (SPN54) 6
Fusobacterium multispecies_spp26_2 (SPP26) 6
multigenus multispecies_spp15_2 (SPP15) 6
Veillonella multispecies_spp38_3 (SPP38) 4
Slackia exigua (SP135) 3
Bergeyella sp. HMT907 (SP182) 3
Porphyromonas sp._Oral_Taxon_F92 (SP13) 3
multigenus multispecies_sppn6_2_nov_97.842% (SPPN6) 3
Prevotella intermedia_nov_90.526% (SPN33) 3
Selenomonas sp._Oral_Taxon_D75 (SP246) 2
Capnocytophaga sp._Oral_Taxon_F95_nov_97.153% (SPN19) 2
Selenomonas sp._Oral_Taxon_E56 (SP214) 2
Capnocytophaga granulosa (SP165) 2
Prevotella sp. HMT300 (SP157) 2
Lautropia mirabilis (SP221) 2
Selenomonas sputigena (SP185) 1
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP64) 1
Porphyromonas endodontalis_nov_97.857% (SPN5) 1
Streptococcus sp._str._2136FAA (SP192) 1
Fusobacterium hwasookii_nov_96.774% (SPN46) 1
Fretibacterium fastidiosum (SP201) 1
Fusobacterium hwasookii_nov_97.802% (SPN42) 1
Eikenella corrodens (SP37) 1
Streptococcus sanguinis (SP90) 1
Lachnospiraceae_[G] sp._Oral_Taxon_F93 (SP222) 1
Fusobacterium multispecies_spp17_4 (SPP17) 1
Bergeyella sp. HMT900 nov_97.857% (SPN29) 1
Selenomonas sp. HMT501 (SP226) 1
Selenomonas dianae_nov_97.527% (SPN22) 1
Schaalia cardiffensis (SP245) 1
Alloprevotella rava_nov_97.865% (SPN1) 1
Prevotella sp. HMT472 (SP98) 1
Bacteroidales_[G-2] bacterium HMT274 (SP32) 1
Capnocytophaga gingivalis (SP33) 1
Porphyromonas pasteri (SP10) 1
Prevotella maculosa (SP20) 1
Selenomonas dianae (SP70) 1
Atopobium rimae (SPP40) 1
Fusobacterium multispecies_spp32_3 (SPP32) 1
Capnocytophaga sputigena (SP111) 1
Selenomonas sp. HMT138 (SP107) 1
Streptococcus multispecies_spp21_2 (SPP21) 1
Neisseria sicca (SP99) 0
Leptotrichia sp. HMT215 (SP91) 0
Prevotella pleuritidis (SP92) 0
Porphyromonas multispecies_sppn3_2_nov_97.865% (SPPN3) 0
Fusobacterium multispecies_sppn2_3_nov_96.970% (SPPN2) 0
Streptococcus anginosus (SP96) 0
Streptococcus multispecies_sppn1_2_nov_97.509% (SPPN1) 0
Oribacterium multispecies_spp7_2 (SPP7) 0
Lachnospiraceae_[G-8] bacterium HMT500 nov_97.143% (SPN16) 0
Porphyromonas multispecies_spp8_2 (SPP8) 0
Capnocytophaga multispecies_spp6_2 (SPP6) 0
Selenomonas infelix_nov_97.865% (SPN12) 0
Selenomonas sp._Oral_Taxon_F87_nov_97.857% (SPN13) 0
Alloprevotella rava_nov_94.662% (SPN14) 0
Alloprevotella sp. HMT473 nov_96.085% (SPN15) 0
Alloprevotella tannerae_nov_96.809% (SPN11) 0
Fusobacterium multispecies_sppn5_2_nov_76.786% (SPPN5) 0
Veillonella dispar (SP9) 0
Catonella morbi (SP78) 0
Granulicatella multispecies_sppn8_2_nov_97.143% (SPPN8) 0
multigenus multispecies_sppn7_2_nov_96.071% (SPPN7) 0
Solobacterium moorei (SP71) 0
Fusobacterium sp. HMT204 (SP72) 0
Alloprevotella sp. HMT473 (SP73) 0
Selenomonas infelix (SP74) 0
Fusobacterium sp._Oral_Taxon_D95 (SP75) 0
Parvimonas sp. HMT110 (SP76) 0
Schaalia sp. HMT180 (SP79) 0
Fusobacterium periodonticum (SP89) 0
Streptococcus sp._Oral_Taxon_F53 (SP80) 0
Abiotrophia defectiva (SP81) 0
Selenomonas flueggei (SP82) 0
Veillonella sp._Oral_Taxon_G61 (SP83) 0
Selenomonas sp. HMT149 (SP84) 0
Prevotella sp. HMT317 (SP85) 0
Streptococcus cristatus (SP87) 0
Dialister invisus (SP88) 0
Selenomonas artemidis_nov_97.857% (SPN17) 0
Streptococcus multispecies_spp20_3 (SPP20) 0
Selenomonas sp._Oral_Taxon_F30_nov_97.857% (SPN20) 0
Catonella morbi_nov_97.153% (SPN24) 0
Fusobacterium multispecies_spp28_4 (SPP28) 0
Porphyromonas pasteri_nov_96.429% (SPN52) 0
Fusobacterium multispecies_spp27_2 (SPP27) 0
Fusobacterium hwasookii_nov_94.139% (SPN57) 0
Streptococcus multispecies_spp24_2 (SPP24) 0
Prevotella denticola_nov_97.865% (SPN58) 0
Granulicatella multispecies_spp23_2 (SPP23) 0
Catonella morbi_nov_97.865% (SPN6) 0
Porphyromonas pasteri_nov_97.865% (SPN62) 0
Streptococcus oralis_subsp._dentisani_clade_058_nov_97.857% (SPN63) 0
Porphyromonas endodontalis_nov_97.865% (SPN64) 0
Porphyromonas sp. HMT278 nov_97.865% (SPN65) 0
Bacteroides heparinolyticus_nov_95.745% (SPN7) 0
Eubacterium_[XIVa][G-1] saburreum (SPP10) 0
Selenomonas multispecies_spp11_2 (SPP11) 0
Propionibacterium acnes (SPP13) 0
Aggregatibacter multispecies_spp22_2 (SPP22) 0
Prevotella marshii_nov_97.500% (SPN49) 0
Fusobacterium multispecies_spp29_3 (SPP29) 0
Solobacterium moorei_nov_97.143% (SPN48) 0
Porphyromonas pasteri_nov_95.088% (SPN39) 0
Veillonella multispecies_spp39_2 (SPP39) 0
Selenomonas multispecies_spp35_2 (SPP35) 0
Streptococcus multispecies_spp34_2 (SPP34) 0
Porphyromonas pasteri_nov_97.500% (SPN3) 0
Alloprevotella sp. HMT473 nov_97.153% (SPN31) 0
Fusobacterium multispecies_spp33_2 (SPP33) 0
Dialister invisus_nov_97.509% (SPN35) 0
Porphyromonas endodontalis_nov_97.153% (SPN4) 0
multigenus multispecies_spp3_3 (SPP3) 0
Alloprevotella rava_nov_97.865% (SPN40) 0
Porphyromonas pasteri_nov_96.071% (SPN41) 0
Fusobacterium multispecies_spp31_2 (SPP31) 0
Streptococcus alactolyticus_nov_94.681% (SPN43) 0
Fusobacterium multispecies_spp30_2 (SPP30) 0
Alloprevotella sp. HMT473 nov_95.357% (SPN45) 0
Veillonella parvula (SP7) 0
multigenus multispecies_spp5_2 (SPP5) 0
Anaeroglobus geminatus (SP49) 0
Streptococcus chosunense (SP68) 0
Selenomonas sp. HMT919 (SP169) 0
Capnocytophaga sp. HMT323 (SP150) 0
Dialister sp. HMT119 (SP153) 0
Desulfobulbus sp. HMT041 (SP154) 0
Stomatobaculum longum (SP156) 0
Selenomonas sp._Oral_Taxon_G55 (SP158) 0
Alloprevotella sp. HMT308 (SP16) 0
Prevotella saccharolytica (SP160) 0
Prevotella oris (SP162) 0
Veillonella denticariosi (SP167) 0
Lachnospiraceae_[G-7] bacterium HMT086 (SP168) 0
Fusobacterium hwasookii (SP17) 0
Eikenella halliae (SP196) 0
Bergeyella sp. HMT322 (SP171) 0
Veillonellaceae_[G-1] bacterium HMT132 (SP172) 0
Campylobacter rectus (SP173) 0
Porphyromonas sp. HMT278 (SP18) 0
Atopobium sp. HMT199 (SP181) 0
Streptococcus sp._Oral_Taxon_71 (SP184) 0
Mycoplasma salivarium (SP186) 0
Lachnospiraceae_[G-8] bacterium HMT500 (SP189) 0
Prevotella pallens (SP19) 0
Prevotella sp. HMT376 (SP190) 0
Porphyromonas endodontalis (SP15) 0
Selenomonas sp._Oral_Taxon_H64 (SP149) 0
Fusobacterium sp._Oral_Taxon_H27 (SP144) 0
Dialister pneumosintes (SP143) 0
Prevotella oralis (SP102) 0
Selenomonas sp. HMT481 (SP104) 0
Fretibacterium sp. HMT360 (SP105) 0
Selenomonas sp._Oral_Taxon_E83 (SP106) 0
Prevotella oulorum (SP108) 0
Actinomyces odontolyticus (SP109) 0
Veillonellaceae_[G-1] bacterium HMT129 (SP11) 0
Selenomonas sp._Oral_Taxon_F29 (SP110) 0
Capnocytophaga sp. HMT335 (SP114) 0
Peptostreptococcaceae_[XI][G-2] bacterium HMT091 (SP116) 0
Selenomonas artemidis (SP117) 0
Fusobacterium canifelinum (SP118) 0
Prevotella baroniae (SP119) 0
Porphyromonas gingivalis (SP12) 0
Megasphaera micronuciformis (SP127) 0
Selenomonas sp. HMT136 (SP130) 0
Streptococcus constellatus (SP136) 0
Streptococcus parasanguinis_clade_411 (SP139) 0
Porphyromonas sp. HMT275 (SP14) 0
Oribacterium sp. HMT078 (SP141) 0
Streptococcus pneumoniae (SP142) 0
Prevotella sp. HMT301 (SP191) 0
Streptococcus mitis (SP2) 0
Prevotella sp. HMT314 (SP65) 0
Alloprevotella rava (SP43) 0
Gemella morbillorum (SP31) 0
Prevotella melaninogenica (SP34) 0
Campylobacter showae (SP35) 0
Prevotella dentalis (SP36) 0
Campylobacter concisus (SP38) 0
Prevotella denticola (SP39) 0
Fusobacterium nucleatum (SP4) 0
Haemophilus parainfluenzae (SP40) 0
Streptococcus oralis_subsp._dentisani_clade_058 (SP41) 0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP42) 0
Streptococcus gordonii (SP44) 0
Selenomonas sp._Oral_Taxon_H23 (SP200) 0
Selenomonas sp. HMT146 (SP47) 0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP48) 0
Selenomonas sp._Oral_Taxon_G67 (SP101) 0
Fusobacterium nucleatum_ss_vincentii (SP50) 0
Fusobacterium nucleatum_subsp._vincentii (SP52) 0
Alloprevotella tannerae (SP53) 0
Prevotella marshii (SP54) 0
Selenomonas noxia (SP55) 0
Streptococcus cristatus_clade_578 (SP56) 0
Selenomonas sp._Oral_Taxon_G51 (SP61) 0
Streptococcus oralis_subsp._dentisani_clade_398 (SP3) 0
Streptococcus sp._str._C300 (SP29) 0
Granulicatella adiacens (SP28) 0
Centipeda sp._Oral_Taxon_D18 (SP27) 0
Capnocytophaga sp. HMT338 (SP202) 0
Bilophila wadsworthia (SP206) 0
Prevotella intermedia (SP21) 0
Prevotella sp. HMT315 (SP210) 0
Capnocytophaga sp. HMT324 (SP213) 0
Capnocytophaga sp. HMT380 (SP215) 0
Veillonellaceae_[G-1] bacterium HMT155 (SP216) 0
Capnocytophaga sp. HMT412 (SP218) 0
Oribacterium sinus (SP22) 0
Tannerella forsythia (SP220) 0
Desulfovibrio desulfuricans (SP225) 0
Parvimonas micra (SP23) 0
Megasphaera sp. HMT123 (SP232) 0
Streptococcus mutans (SP233) 0
Prevotella multiformis (SP239) 0
Streptococcus sp. HMT064 (SP24) 0
Fusobacterium sp. HMT370 (SP240) 0
Prevotella buccae (SP25) 0
Selenomonas sp. HMT137 (SP250) 0
Prevotella nigrescens (SP252) 0
Streptococcus sp. HMT056 (SP26) 0
Fusobacterium multispecies_sppn9_3_nov_96.337% (SPPN9) 0
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Perio-Control Perio-Control Perio-Control Perio-Control Perio-Control Perio-Dfx_2mM Perio-Dfx_2mM Perio-Dfx_2mM Perio-Dfx_2mM Perio-Dfx_2mM
Campylobacter sp._Oral_Taxon_E65 (SP63) 2.0 2.0 2.0 2.5 3.0 38.0 59.0 80.0 98.5 117.0
multigenus multispecies_spp36_2 (SPP36) 162.0 163.5 165.0 167.5 170.0 75.0 107.5 140.0 154.5 169.0
Selenomonas sp. HMT481 nov_96.786% (SPN54) 9.0 9.0 9.0 9.0 9.0 4.0 5.5 7.0 7.5 8.0
Fusobacterium multispecies_spp26_2 (SPP26) 27.0 28.0 29.0 40.0 51.0 88.0 88.5 89.0 95.5 102.0
multigenus multispecies_spp15_2 (SPP15) 1.0 1.0 1.0 1.5 2.0 5.0 5.0 5.0 5.5 6.0
Veillonella multispecies_spp38_3 (SPP38) 54.0 57.0 60.0 61.0 62.0 25.0 35.0 45.0 48.0 51.0
Slackia exigua (SP135) 1.0 1.0 1.0 1.0 1.0 2.0 2.5 3.0 4.0 5.0
Bergeyella sp. HMT907 (SP182) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Porphyromonas sp._Oral_Taxon_F92 (SP13) 1.0 1.0 1.0 1.0 1.0 2.0 2.5 3.0 4.0 5.0
multigenus multispecies_sppn6_2_nov_97.842% (SPPN6) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Prevotella intermedia_nov_90.526% (SPN33) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Selenomonas sp._Oral_Taxon_D75 (SP246) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp._Oral_Taxon_F95_nov_97.153% (SPN19) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp._Oral_Taxon_E56 (SP214) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga granulosa (SP165) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT300 (SP157) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Lautropia mirabilis (SP221) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sputigena (SP185) 2.0 3.0 4.0 7.0 10.0 3.0 3.0 3.0 3.0 3.0
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP64) 64.0 65.5 67.0 72.5 78.0 35.0 49.5 64.0 66.5 69.0
Porphyromonas endodontalis_nov_97.857% (SPN5) 1.0 1.0 1.0 1.0 1.0 2.0 3.0 4.0 4.5 5.0
Streptococcus sp._str._2136FAA (SP192) 2.0 2.0 2.0 2.5 3.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium hwasookii_nov_96.774% (SPN46) 2.0 2.5 3.0 3.0 3.0 1.0 1.5 2.0 3.5 5.0
Fretibacterium fastidiosum (SP201) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Fusobacterium hwasookii_nov_97.802% (SPN42) 2.0 3.0 4.0 4.0 4.0 1.0 2.0 3.0 3.5 4.0
Eikenella corrodens (SP37) 10.0 12.5 15.0 15.0 15.0 14.0 17.0 20.0 22.0 24.0
Streptococcus sanguinis (SP90) 15.0 19.0 23.0 25.5 28.0 15.0 16.0 17.0 25.5 34.0
Lachnospiraceae_[G] sp._Oral_Taxon_F93 (SP222) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 3.5 5.0
Fusobacterium multispecies_spp17_4 (SPP17) 11.0 13.0 15.0 16.5 18.0 4.0 6.0 8.0 9.0 10.0
Bergeyella sp. HMT900 nov_97.857% (SPN29) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Selenomonas sp. HMT501 (SP226) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Selenomonas dianae_nov_97.527% (SPN22) 10.0 11.0 12.0 13.5 15.0 9.0 9.5 10.0 14.5 19.0
Schaalia cardiffensis (SP245) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella rava_nov_97.865% (SPN1) 1.0 1.0 1.0 1.0 1.0 2.0 3.0 4.0 5.0 6.0
Prevotella sp. HMT472 (SP98) 2.0 3.5 5.0 8.5 12.0 1.0 1.0 1.0 1.0 1.0
Bacteroidales_[G-2] bacterium HMT274 (SP32) 28.0 29.5 31.0 36.0 41.0 7.0 8.5 10.0 14.5 19.0
Capnocytophaga gingivalis (SP33) 7.0 7.5 8.0 8.5 9.0 5.0 8.0 11.0 13.0 15.0
Porphyromonas pasteri (SP10) 930.0 984.0 1038.0 1196.0 1354.0 709.0 742.0 775.0 1053.5 1332.0
Prevotella maculosa (SP20) 20.0 23.5 27.0 28.5 30.0 11.0 15.5 20.0 20.5 21.0
Selenomonas dianae (SP70) 27.0 28.5 30.0 42.5 55.0 32.0 33.5 35.0 41.5 48.0
Atopobium rimae (SPP40) 22.0 23.5 25.0 30.0 35.0 8.0 15.0 22.0 22.0 22.0
Fusobacterium multispecies_spp32_3 (SPP32) 1332.0 1484.5 1637.0 2093.5 2550.0 1337.0 1639.0 1941.0 1991.5 2042.0
Capnocytophaga sputigena (SP111) 4.0 4.0 4.0 5.0 6.0 2.0 2.5 3.0 4.0 5.0
Selenomonas sp. HMT138 (SP107) 1.0 1.0 1.0 2.0 3.0 2.0 2.0 2.0 2.0 2.0
Streptococcus multispecies_spp21_2 (SPP21) 5.0 6.0 7.0 7.0 7.0 1.0 1.5 2.0 4.0 6.0
Neisseria sicca (SP99) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Leptotrichia sp. HMT215 (SP91) 1.0 1.5 2.0 3.5 5.0 1.0 1.0 1.0 2.5 4.0
Prevotella pleuritidis (SP92) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas multispecies_sppn3_2_nov_97.865% (SPPN3) 1.0 1.0 1.0 3.0 5.0 2.0 3.0 4.0 4.0 4.0
Fusobacterium multispecies_sppn2_3_nov_96.970% (SPPN2) 6.0 7.0 8.0 9.0 10.0 6.0 7.0 8.0 17.0 26.0
Streptococcus anginosus (SP96) 2.0 3.0 4.0 5.5 7.0 2.0 3.0 4.0 4.0 4.0
Streptococcus multispecies_sppn1_2_nov_97.509% (SPPN1) 2.0 2.5 3.0 5.0 7.0 1.0 3.0 5.0 5.5 6.0
Oribacterium multispecies_spp7_2 (SPP7) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Lachnospiraceae_[G-8] bacterium HMT500 nov_97.143% (SPN16) 1.0 1.0 1.0 2.5 4.0 1.0 1.0 1.0 2.0 3.0
Porphyromonas multispecies_spp8_2 (SPP8) 2.0 31.0 60.0 852.0 1644.0 275.0 1108.5 1942.0 2056.5 2171.0
Capnocytophaga multispecies_spp6_2 (SPP6) 1.0 2.5 4.0 4.5 5.0 2.0 2.0 2.0 3.0 4.0
Selenomonas infelix_nov_97.865% (SPN12) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp._Oral_Taxon_F87_nov_97.857% (SPN13) 1.0 1.0 1.0 2.5 4.0 1.0 1.5 2.0 2.0 2.0
Alloprevotella rava_nov_94.662% (SPN14) 1.0 1.0 1.0 2.5 4.0 1.0 1.0 1.0 2.0 3.0
Alloprevotella sp. HMT473 nov_96.085% (SPN15) 1.0 2.0 3.0 3.5 4.0 1.0 1.0 1.0 1.5 2.0
Alloprevotella tannerae_nov_96.809% (SPN11) 1.0 1.0 1.0 1.5 2.0 2.0 2.5 3.0 3.0 3.0
Fusobacterium multispecies_sppn5_2_nov_76.786% (SPPN5) 1.0 1.0 1.0 2.5 4.0 1.0 1.5 2.0 3.0 4.0
Veillonella dispar (SP9) 8.0 8.5 9.0 9.5 10.0 4.0 5.5 7.0 7.5 8.0
Catonella morbi (SP78) 1.0 10.0 19.0 112.0 205.0 20.0 76.0 132.0 183.0 234.0
Granulicatella multispecies_sppn8_2_nov_97.143% (SPPN8) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
multigenus multispecies_sppn7_2_nov_96.071% (SPPN7) 2.0 3.5 5.0 6.5 8.0 2.0 2.5 3.0 8.5 14.0
Solobacterium moorei (SP71) 111.0 131.0 151.0 156.0 161.0 76.0 83.0 90.0 110.5 131.0
Fusobacterium sp. HMT204 (SP72) 1.0 4.5 8.0 12.0 16.0 4.0 4.0 4.0 8.0 12.0
Alloprevotella sp. HMT473 (SP73) 1.0 168.5 336.0 543.0 750.0 14.0 17.5 21.0 268.0 515.0
Selenomonas infelix (SP74) 2.0 2.5 3.0 5.0 7.0 5.0 5.5 6.0 6.0 6.0
Fusobacterium sp._Oral_Taxon_D95 (SP75) 11.0 14.5 18.0 25.5 33.0 18.0 19.0 20.0 28.0 36.0
Parvimonas sp. HMT110 (SP76) 4.0 28.0 52.0 78.0 104.0 1.0 1.5 2.0 3.5 5.0
Schaalia sp. HMT180 (SP79) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Fusobacterium periodonticum (SP89) 6.0 6.5 7.0 10.0 13.0 7.0 8.0 9.0 10.0 11.0
Streptococcus sp._Oral_Taxon_F53 (SP80) 4.0 4.0 4.0 7.0 10.0 4.0 6.5 9.0 9.5 10.0
Abiotrophia defectiva (SP81) 3.0 3.0 3.0 5.0 7.0 4.0 6.0 8.0 9.5 11.0
Selenomonas flueggei (SP82) 2.0 4.0 6.0 7.0 8.0 1.0 1.5 2.0 3.5 5.0
Veillonella sp._Oral_Taxon_G61 (SP83) 1.0 2.5 4.0 4.5 5.0 1.0 1.0 1.0 2.0 3.0
Selenomonas sp. HMT149 (SP84) 1.0 1.0 1.0 2.5 4.0 1.0 1.0 1.0 1.5 2.0
Prevotella sp. HMT317 (SP85) 3.0 10.5 18.0 24.0 30.0 6.0 8.0 10.0 10.0 10.0
Streptococcus cristatus (SP87) 1.0 1.5 2.0 3.5 5.0 1.0 1.5 2.0 2.5 3.0
Dialister invisus (SP88) 52.0 62.0 72.0 78.0 84.0 65.0 67.0 69.0 101.5 134.0
Selenomonas artemidis_nov_97.857% (SPN17) 3.0 3.0 3.0 4.0 5.0 3.0 3.5 4.0 5.0 6.0
Streptococcus multispecies_spp20_3 (SPP20) 356.0 404.5 453.0 594.0 735.0 283.0 465.5 648.0 655.0 662.0
Selenomonas sp._Oral_Taxon_F30_nov_97.857% (SPN20) 1.0 1.5 2.0 2.5 3.0 1.0 1.0 1.0 1.0 1.0
Catonella morbi_nov_97.153% (SPN24) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 5.0
Fusobacterium multispecies_spp28_4 (SPP28) 1.0 1.0 1.0 2.5 4.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas pasteri_nov_96.429% (SPN52) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Fusobacterium multispecies_spp27_2 (SPP27) 2.0 3.5 5.0 6.5 8.0 1.0 1.0 1.0 2.0 3.0
Fusobacterium hwasookii_nov_94.139% (SPN57) 1.0 3.0 5.0 5.5 6.0 2.0 2.0 2.0 4.0 6.0
Streptococcus multispecies_spp24_2 (SPP24) 3.0 3.0 3.0 6.0 9.0 2.0 2.0 2.0 3.5 5.0
Prevotella denticola_nov_97.865% (SPN58) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Granulicatella multispecies_spp23_2 (SPP23) 12.0 15.5 19.0 19.5 20.0 2.0 10.0 18.0 19.5 21.0
Catonella morbi_nov_97.865% (SPN6) 1.0 1.0 1.0 3.0 5.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas pasteri_nov_97.865% (SPN62) 1.0 1.0 1.0 6.5 12.0 1.0 4.5 8.0 10.0 12.0
Streptococcus oralis_subsp._dentisani_clade_058_nov_97.857% (SPN63) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas endodontalis_nov_97.865% (SPN64) 1.0 1.0 1.0 2.5 4.0 2.0 4.0 6.0 6.0 6.0
Porphyromonas sp. HMT278 nov_97.865% (SPN65) 2.0 2.5 3.0 3.5 4.0 3.0 3.0 3.0 3.5 4.0
Bacteroides heparinolyticus_nov_95.745% (SPN7) 34.0 39.5 45.0 61.5 78.0 58.0 63.5 69.0 70.5 72.0
Eubacterium_[XIVa][G-1] saburreum (SPP10) 1.0 1.0 1.0 1.5 2.0 1.0 2.0 3.0 4.5 6.0
Selenomonas multispecies_spp11_2 (SPP11) 2.0 2.5 3.0 4.5 6.0 2.0 2.5 3.0 4.0 5.0
Propionibacterium acnes (SPP13) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Aggregatibacter multispecies_spp22_2 (SPP22) 1.0 1.5 2.0 2.5 3.0 1.0 1.5 2.0 2.0 2.0
Prevotella marshii_nov_97.500% (SPN49) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Fusobacterium multispecies_spp29_3 (SPP29) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 2.0 3.0
Solobacterium moorei_nov_97.143% (SPN48) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas pasteri_nov_95.088% (SPN39) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Veillonella multispecies_spp39_2 (SPP39) 9.0 10.5 12.0 14.5 17.0 3.0 3.5 4.0 8.5 13.0
Selenomonas multispecies_spp35_2 (SPP35) 8.0 9.5 11.0 15.5 20.0 11.0 12.5 14.0 20.0 26.0
Streptococcus multispecies_spp34_2 (SPP34) 1.0 4.5 8.0 15.5 23.0 10.0 12.0 14.0 16.0 18.0
Porphyromonas pasteri_nov_97.500% (SPN3) 1.0 1.0 1.0 3.0 5.0 1.0 1.5 2.0 2.0 2.0
Alloprevotella sp. HMT473 nov_97.153% (SPN31) 2.0 5.5 9.0 15.0 21.0 1.0 4.0 7.0 8.5 10.0
Fusobacterium multispecies_spp33_2 (SPP33) 1.0 2.0 3.0 4.0 5.0 1.0 4.0 7.0 10.0 13.0
Dialister invisus_nov_97.509% (SPN35) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas endodontalis_nov_97.153% (SPN4) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 3.0 4.0
multigenus multispecies_spp3_3 (SPP3) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella rava_nov_97.865% (SPN40) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas pasteri_nov_96.071% (SPN41) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp31_2 (SPP31) 34.0 36.5 39.0 58.0 77.0 24.0 36.5 49.0 49.0 49.0
Streptococcus alactolyticus_nov_94.681% (SPN43) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp30_2 (SPP30) 2.0 3.0 4.0 4.5 5.0 1.0 1.5 2.0 4.0 6.0
Alloprevotella sp. HMT473 nov_95.357% (SPN45) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.0 1.0
Veillonella parvula (SP7) 36.0 41.5 47.0 55.5 64.0 22.0 29.5 37.0 43.0 49.0
multigenus multispecies_spp5_2 (SPP5) 3.0 4.5 6.0 6.5 7.0 4.0 4.0 4.0 5.5 7.0
Anaeroglobus geminatus (SP49) 1.0 3.5 6.0 13.5 21.0 9.0 12.0 15.0 16.5 18.0
Streptococcus chosunense (SP68) 6.0 8.0 10.0 17.5 25.0 7.0 8.0 9.0 12.0 15.0
Selenomonas sp. HMT919 (SP169) 10.0 10.5 11.0 12.0 13.0 3.0 6.5 10.0 10.5 11.0
Capnocytophaga sp. HMT323 (SP150) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Dialister sp. HMT119 (SP153) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Desulfobulbus sp. HMT041 (SP154) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Stomatobaculum longum (SP156) 1.0 1.0 1.0 1.5 2.0 1.0 2.0 3.0 3.5 4.0
Selenomonas sp._Oral_Taxon_G55 (SP158) 1.0 1.5 2.0 2.0 2.0 1.0 1.5 2.0 2.0 2.0
Alloprevotella sp. HMT308 (SP16) 8.0 29.5 51.0 62.5 74.0 4.0 15.5 27.0 30.5 34.0
Prevotella saccharolytica (SP160) 1.0 3.0 5.0 5.0 5.0 1.0 1.0 1.0 1.0 1.0
Prevotella oris (SP162) 2.0 2.0 2.0 2.5 3.0 2.0 2.5 3.0 3.0 3.0
Veillonella denticariosi (SP167) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Lachnospiraceae_[G-7] bacterium HMT086 (SP168) 1.0 1.5 2.0 2.5 3.0 1.0 1.0 1.0 1.5 2.0
Fusobacterium hwasookii (SP17) 8.0 10.0 12.0 13.0 14.0 14.0 14.0 14.0 15.5 17.0
Eikenella halliae (SP196) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Bergeyella sp. HMT322 (SP171) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Veillonellaceae_[G-1] bacterium HMT132 (SP172) 1.0 1.5 2.0 2.5 3.0 1.0 1.0 1.0 1.0 1.0
Campylobacter rectus (SP173) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Porphyromonas sp. HMT278 (SP18) 290.0 519.5 749.0 779.0 809.0 463.0 465.0 467.0 643.0 819.0
Atopobium sp. HMT199 (SP181) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.5 2.0
Streptococcus sp._Oral_Taxon_71 (SP184) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Mycoplasma salivarium (SP186) 1.0 1.0 1.0 2.5 4.0 2.0 2.0 2.0 4.0 6.0
Lachnospiraceae_[G-8] bacterium HMT500 (SP189) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 2.0 3.0
Prevotella pallens (SP19) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Prevotella sp. HMT376 (SP190) 1.0 1.5 2.0 2.5 3.0 1.0 1.0 1.0 2.5 4.0
Porphyromonas endodontalis (SP15) 6.0 124.5 243.0 558.5 874.0 217.0 241.0 265.0 310.5 356.0
Selenomonas sp._Oral_Taxon_H64 (SP149) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Fusobacterium sp._Oral_Taxon_H27 (SP144) 1.0 1.0 1.0 4.5 8.0 2.0 2.5 3.0 3.5 4.0
Dialister pneumosintes (SP143) 1.0 1.5 2.0 6.0 10.0 1.0 1.0 1.0 8.0 15.0
Prevotella oralis (SP102) 4.0 8.0 12.0 12.5 13.0 1.0 3.5 6.0 6.5 7.0
Selenomonas sp. HMT481 (SP104) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.0 1.0
Fretibacterium sp. HMT360 (SP105) 27.0 28.5 30.0 41.5 53.0 40.0 40.0 40.0 47.5 55.0
Selenomonas sp._Oral_Taxon_E83 (SP106) 2.0 2.5 3.0 3.0 3.0 2.0 2.5 3.0 5.5 8.0
Prevotella oulorum (SP108) 2.0 2.5 3.0 6.5 10.0 3.0 5.0 7.0 8.5 10.0
Actinomyces odontolyticus (SP109) 3.0 4.0 5.0 6.0 7.0 2.0 7.0 12.0 15.0 18.0
Veillonellaceae_[G-1] bacterium HMT129 (SP11) 1.0 1.5 2.0 2.0 2.0 1.0 2.5 4.0 5.0 6.0
Selenomonas sp._Oral_Taxon_F29 (SP110) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Capnocytophaga sp. HMT335 (SP114) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Peptostreptococcaceae_[XI][G-2] bacterium HMT091 (SP116) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Selenomonas artemidis (SP117) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium canifelinum (SP118) 1.0 1.0 1.0 1.5 2.0 1.0 1.5 2.0 3.0 4.0
Prevotella baroniae (SP119) 5.0 6.0 7.0 11.0 15.0 7.0 9.5 12.0 14.0 16.0
Porphyromonas gingivalis (SP12) 1.0 2.0 3.0 15.0 27.0 13.0 15.5 18.0 21.5 25.0
Megasphaera micronuciformis (SP127) 1.0 1.0 1.0 1.5 2.0 2.0 2.5 3.0 7.5 12.0
Selenomonas sp. HMT136 (SP130) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Streptococcus constellatus (SP136) 2.0 2.0 2.0 3.5 5.0 1.0 2.0 3.0 5.0 7.0
Streptococcus parasanguinis_clade_411 (SP139) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 3.0 4.0
Porphyromonas sp. HMT275 (SP14) 5.0 7.0 9.0 20.0 31.0 11.0 13.0 15.0 26.0 37.0
Oribacterium sp. HMT078 (SP141) 1.0 1.0 1.0 2.5 4.0 2.0 2.5 3.0 4.5 6.0
Streptococcus pneumoniae (SP142) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT301 (SP191) 2.0 3.0 4.0 4.5 5.0 1.0 1.0 1.0 2.5 4.0
Streptococcus mitis (SP2) 1.0 1.5 2.0 2.5 3.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT314 (SP65) 11.0 16.0 21.0 23.5 26.0 3.0 8.5 14.0 33.0 52.0
Alloprevotella rava (SP43) 263.0 306.5 350.0 634.5 919.0 527.0 552.5 578.0 653.0 728.0
Gemella morbillorum (SP31) 12.0 13.0 14.0 17.0 20.0 14.0 22.5 31.0 48.0 65.0
Prevotella melaninogenica (SP34) 2.0 2.5 3.0 6.0 9.0 1.0 1.5 2.0 6.5 11.0
Campylobacter showae (SP35) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Prevotella dentalis (SP36) 1.0 1.0 1.0 2.0 3.0 1.0 1.5 2.0 3.0 4.0
Campylobacter concisus (SP38) 5.0 7.0 9.0 9.5 10.0 7.0 9.5 12.0 15.5 19.0
Prevotella denticola (SP39) 1.0 2.5 4.0 19.0 34.0 11.0 12.0 13.0 23.5 34.0
Fusobacterium nucleatum (SP4) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.0 1.0
Haemophilus parainfluenzae (SP40) 1.0 1.0 1.0 2.5 4.0 1.0 1.0 1.0 1.5 2.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP41) 2.0 3.0 4.0 4.0 4.0 3.0 3.5 4.0 7.5 11.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP42) 11.0 13.0 15.0 17.5 20.0 6.0 9.5 13.0 14.0 15.0
Streptococcus gordonii (SP44) 3.0 6.5 10.0 14.5 19.0 5.0 6.0 7.0 9.5 12.0
Selenomonas sp._Oral_Taxon_H23 (SP200) 1.0 1.0 1.0 1.5 2.0 1.0 1.5 2.0 3.5 5.0
Selenomonas sp. HMT146 (SP47) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP48) 5.0 8.0 11.0 15.5 20.0 7.0 9.5 12.0 13.0 14.0
Selenomonas sp._Oral_Taxon_G67 (SP101) 2.0 2.5 3.0 4.5 6.0 3.0 3.5 4.0 5.5 7.0
Fusobacterium nucleatum_ss_vincentii (SP50) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_subsp._vincentii (SP52) 3.0 5.5 8.0 8.5 9.0 3.0 5.5 8.0 10.0 12.0
Alloprevotella tannerae (SP53) 30.0 51.5 73.0 99.5 126.0 52.0 61.0 70.0 125.0 180.0
Prevotella marshii (SP54) 21.0 35.5 50.0 54.0 58.0 14.0 20.5 27.0 40.0 53.0
Selenomonas noxia (SP55) 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0 2.0 2.0
Streptococcus cristatus_clade_578 (SP56) 26.0 29.5 33.0 61.5 90.0 36.0 42.0 48.0 71.5 95.0
Selenomonas sp._Oral_Taxon_G51 (SP61) 1.0 2.0 3.0 3.5 4.0 1.0 1.0 1.0 1.5 2.0
Streptococcus oralis_subsp._dentisani_clade_398 (SP3) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.5 2.0
Streptococcus sp._str._C300 (SP29) 5.0 6.0 7.0 7.5 8.0 3.0 5.5 8.0 9.0 10.0
Granulicatella adiacens (SP28) 10.0 24.0 38.0 64.5 91.0 13.0 15.0 17.0 29.0 41.0
Centipeda sp._Oral_Taxon_D18 (SP27) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT338 (SP202) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.0 1.0
Bilophila wadsworthia (SP206) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 2.5 4.0
Prevotella intermedia (SP21) 146.0 167.0 188.0 273.0 358.0 47.0 68.5 90.0 139.0 188.0
Prevotella sp. HMT315 (SP210) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Capnocytophaga sp. HMT324 (SP213) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Capnocytophaga sp. HMT380 (SP215) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Veillonellaceae_[G-1] bacterium HMT155 (SP216) 1.0 1.5 2.0 2.0 2.0 1.0 1.0 1.0 1.5 2.0
Capnocytophaga sp. HMT412 (SP218) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.5 2.0
Oribacterium sinus (SP22) 8.0 14.0 20.0 24.5 29.0 16.0 17.5 19.0 20.0 21.0
Tannerella forsythia (SP220) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Desulfovibrio desulfuricans (SP225) 1.0 1.0 1.0 2.0 3.0 1.0 1.0 1.0 1.0 1.0
Parvimonas micra (SP23) 6.0 8.5 11.0 18.0 25.0 6.0 8.0 10.0 11.5 13.0
Megasphaera sp. HMT123 (SP232) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Streptococcus mutans (SP233) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Prevotella multiformis (SP239) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT064 (SP24) 6.0 6.5 7.0 8.5 10.0 1.0 2.0 3.0 4.5 6.0
Fusobacterium sp. HMT370 (SP240) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Prevotella buccae (SP25) 4.0 5.0 6.0 6.0 6.0 4.0 4.5 5.0 5.0 5.0
Selenomonas sp. HMT137 (SP250) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Prevotella nigrescens (SP252) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.5 2.0
Streptococcus sp. HMT056 (SP26) 1.0 1.0 1.0 1.5 2.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_sppn9_3_nov_96.337% (SPPN9) 1.0 1.0 1.0 6.5 12.0 1.0 1.5 2.0 5.0 8.0
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