taxon lfc_(Intercept) lfc_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER se_(Intercept) se_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER W_(Intercept) W_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER p_(Intercept) p_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER q_(Intercept) q_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER diff_(Intercept) diff_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER passed_ss_(Intercept) passed_ss_Age_HIV_Shedding_AgeADULT HIV-Neg SHEDDER Capnocytophaga sp._HMT_901 (SP1) 0.0240541039008748 1.03902249227092 0.172529310995124 0.353624869532346 0.139420390437626 2.93820537465305 0.911810699874022 0.208840986722677 1 1 FALSE FALSE TRUE TRUE Prevotella micans (SP101) -0.0381224908943454 0.12906738539745 0.245030746477783 0.490643669430721 -0.155582478698451 0.263057272393227 0.879180471523742 0.797368513139666 1 1 FALSE FALSE TRUE TRUE Schaalia lingnae (SP114) -0.478370386808529 0.882900448226649 0.479703508405484 0.669527896152211 -0.997220946743987 1.31869105574345 0.336857870747807 0.210031992959157 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_257 (SP12) 0.33789385563461 -0.851923209146312 0.356759134975011 0.665393026461011 0.947120402840639 -1.28033083496139 0.371303754288515 0.236301735363681 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122) -0.283553639286221 0.544875545874577 0.328651456874814 0.701300961951164 -0.862779194659797 0.776949662750526 0.401006671927973 0.448523624073846 1 1 FALSE FALSE TRUE TRUE Oribacterium sp._HMT_078 (SP123) -0.672860336296259 1.1619921136404 0.374248324432842 0.658091418976295 -1.79789805957302 1.76570014459079 0.0954460102261964 0.100905957467804 1 1 FALSE FALSE TRUE TRUE Prevotella pleuritidis (SP125) 0.207268188915513 -0.421402643937222 0.489336235068828 0.709745502466458 0.423570081390681 -0.593737674240686 0.680042999095949 0.564697332870085 1 1 FALSE FALSE TRUE TRUE Butyrivibrio sp._HMT_455 (SP126) -0.0019229517286113 -0.190013002903709 0.540426134907316 0.716146408853802 -0.00355821379538036 -0.26532703446468 0.997224672521513 0.795664074023036 1 1 FALSE FALSE TRUE TRUE Oribacterium sinus (SP127) -0.525329635045551 1.1121454844796 0.422954567664741 0.630369389697883 -1.24204743300457 1.76427583993667 0.231081667276589 0.0956450664238811 1 1 FALSE FALSE TRUE TRUE Lancefieldella sp._HMT_199 (SP129) -0.295068359447075 0.560659026364241 0.547107407679829 0.70221247692784 -0.539324372701148 0.798417921619832 0.598779074615873 0.438971011507436 1 1 FALSE FALSE TRUE TRUE Selenomonas dianae (SP130) -0.0335523170003439 -0.0163278518528977 0.358469988007481 0.556380590184488 -0.0935986780562609 -0.0293465518764477 0.927478531192361 0.977228658479577 1 1 FALSE FALSE TRUE TRUE Leptotrichia buccalis (SP132) -0.625121245701258 1.32281666253054 0.419824379711325 0.624333335636043 -1.48900653680736 2.11876667002398 0.154802830271367 0.0491391103293823 1 1 FALSE FALSE TRUE TRUE Cardiobacterium valvarum (SP137) -0.542686666325974 0.913406651614767 0.281817206024369 0.436259573684991 -1.92566903200029 2.0937228813099 0.0830271077553758 0.0627355005721034 1 1 FALSE FALSE TRUE TRUE Fusobacterium periodonticum (SP138) 0.175785435407363 -0.367986330920995 0.30221728952953 0.495809720342767 0.581652478192141 -0.742192651379638 0.568434216827021 0.468102155563655 1 1 FALSE FALSE TRUE TRUE Treponema denticola (SP148) -0.210640258285205 0.485220605812289 0.678233598602174 0.855757268788848 -0.31057184238488 0.567007285253938 0.760701713861055 0.579687457123706 1 1 FALSE FALSE TRUE TRUE Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP151) -0.146567914786345 0.0328385306142911 0.281923432383415 0.429327652830154 -0.519885536109012 0.0764882727628131 0.625331896068209 0.941996932929487 1 1 FALSE FALSE TRUE TRUE Peptidiphaga sp._HMT_183 (SP152) 0.237025441933303 -0.3459561486892 0.192728891746366 0.39773044501917 1.22983865981667 -0.869825664647136 0.273464542998849 0.424177191695435 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP157) -0.438586966510393 1.09567154289122 0.37820903719294 0.568986731155522 -1.15964168853705 1.92565394392604 0.267050860273534 0.0763025987632833 1 1 FALSE FALSE TRUE TRUE Romboutsia timonensis (SP158) -0.461274088384901 0.879205997130495 0.162239961920298 0.351154403892495 -2.84315949612653 2.50375899429033 0.0654761446498428 0.087416580078852 1 1 FALSE FALSE TRUE TRUE Prevotella veroralis (SP159) -0.404034321659747 0.856077600665126 0.48311527509092 0.808990759192811 -0.836310384894598 1.05820442438588 0.414581623802199 0.304767782063694 1 1 FALSE FALSE TRUE TRUE Eikenella halliae (SP161) -0.38420808512467 0.814222212424407 0.319641703796673 0.593472203027474 -1.20199611177479 1.3719635195563 0.2458419256403 0.187909741971677 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_217 (SP162) -0.224085241133749 0.549852239595261 0.327557462961567 0.492568831137889 -0.684109710423667 1.11629523598771 0.524317791775179 0.315049151710937 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_212 (SP163) -0.458049504370225 0.970109653053913 0.50633357892311 0.618268509917896 -0.904639793679933 1.56907498520787 0.378298381554257 0.135055211316771 1 1 FALSE FALSE TRUE TRUE Treponema socranskii (SP171) -0.0718336567453569 0.11366382819874 0.346415253705134 0.623810129411453 -0.207362857082792 0.182209013351512 0.838939440591476 0.858229311266154 1 1 FALSE FALSE TRUE TRUE Tannerella forsythia (SP172) -0.234621847049803 0.596699793683061 0.572659541219595 0.73626294164581 -0.40970564560948 0.810443878037952 0.687813068607984 0.430356189966314 1 1 FALSE FALSE TRUE TRUE Prevotella oris (SP176) -0.00889127452758259 0.021886723386112 0.509213655104299 0.735989968598458 -0.0174607935951 0.0297378012200231 0.98627230380988 0.976622496555608 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-5] bacterium_HMT_505 (SP177) -0.266855833860379 0.569355770256864 0.415949163593514 0.515459454869556 -0.641558770199052 1.10455975708302 0.541589027722215 0.305865365872737 1 1 FALSE FALSE TRUE TRUE Granulicatella elegans (SP185) -0.302211673172883 0.641118676081746 0.44010225307596 0.712953083535614 -0.686685130695576 0.89924385052431 0.501541329846938 0.381083999447785 1 1 FALSE FALSE TRUE TRUE Tannerella serpentiformis (SP188) -0.461376854852777 0.833255642808454 0.311002527262741 0.529784538216999 -1.48351480907098 1.5728198592069 0.160098959551406 0.138081630254907 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_392 (SP193) -0.298151492470131 0.574071252242396 0.478317799953824 0.61985112000841 -0.623333466784874 0.926143768578829 0.541849881663807 0.368130927126892 1 1 FALSE FALSE TRUE TRUE Prevotella melaninogenica (SP194) 0.637413334483797 -1.34253411786013 0.303998352745135 0.44349639909455 2.09676575128744 -3.02715900422433 0.0512797816063557 0.00760122651475653 1 1 FALSE FALSE FALSE TRUE Prevotella histicola (SP195) 0.42894104068716 -0.902425942067234 0.636249605072618 0.870585450795432 0.674171012865624 -1.03657365424923 0.509266898712397 0.314455169989016 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP201) -0.693525320253294 1.23314106700353 0.419092169569829 0.641664523928164 -1.65482767422057 1.92178470371784 0.141933565419283 0.0960770890092344 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP202) -0.392621272989033 0.831983386804729 0.43021886866185 0.568591428413076 -0.912608213140997 1.46323589352511 0.3742098009965 0.161646937372536 1 1 FALSE FALSE TRUE TRUE Centipeda periodontii (SP203) -0.135886639216776 -0.132463217176141 0.388228659045941 0.510487756166976 -0.350017022315437 -0.259483632224107 0.733585860815834 0.800525858016943 1 1 FALSE FALSE TRUE TRUE Aggregatibacter actinomycetemcomitans (SP204) -1.62545574086717 3.18111641124934 0.366161598527465 0.491578399629422 -4.43917589229458 6.47122903212882 0.0471827155169356 0.0230568952893069 1 1 FALSE FALSE FALSE FALSE Treponema sp._HMT_246 (SP205) -0.585303140884201 1.30296311694641 0.467432442935834 0.597358910576223 -1.25216627499805 2.18120646378162 0.265889712525192 0.0809896552713341 1 1 FALSE FALSE TRUE TRUE Prevotella denticola (SP208) -0.154579990512257 0.294273230651059 0.579962825708683 0.806345755667094 -0.26653430816599 0.364946709997383 0.793232229290802 0.719930251234004 1 1 FALSE FALSE TRUE TRUE Alloprevotella tannerae (SP209) 0.100824192029096 -0.239196957639101 0.491670514716001 0.619608909112117 0.205064548333419 -0.386045058619095 0.840107786661394 0.704548287624465 1 1 FALSE FALSE TRUE TRUE Eikenella corrodens (SP210) -0.274798767901681 0.599704072824532 0.288160681374937 0.561479798390848 -0.953630337735528 1.06807773769107 0.35538690399654 0.302373950987546 1 1 FALSE FALSE TRUE TRUE Capnocytophaga sputigena (SP216) 0.0122279947658741 -0.0100066378811188 0.287518054002888 0.595127699720341 0.0425294850032314 -0.0168142700899674 0.966602831395234 0.98679267440387 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] sp._HMT_907 (SP217) 0.111267140162681 -0.283276186835291 0.329050023308696 0.460477015702921 0.338146580400928 -0.615179861698132 0.741095151695168 0.549924557402979 1 1 FALSE FALSE TRUE TRUE Streptococcus sanguinis (SP22) -0.970330849643243 2.05159249307473 0.35027904165244 0.611416637969454 -2.77016530896542 3.35547377298755 0.0131018291309917 0.00375233101263181 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_256 (SP235) 0.00962682948945518 -0.711244135028791 0.166857912440827 0.390870878615013 0.0576947736468247 -1.81963961487479 0.957619613238944 0.166380452567917 1 1 FALSE FALSE TRUE TRUE Prevotella fusca (SP236) -0.3003548083324 0.70066888928062 0.361191326601151 0.614961928735405 -0.831567056603409 1.13936953905661 0.425064524470883 0.281105710900035 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_912 (SP238) 0.0600598763399345 -0.146027210619471 0.377353592846099 0.572445396758196 0.159160738041335 -0.255093693558259 0.876189616096258 0.802970239994335 1 1 FALSE FALSE TRUE TRUE Prevotella shahii (SP239) -0.120850361053478 0.210044080659347 0.336566169908381 0.683779074559025 -0.359068652343684 0.307181205851914 0.726341020590701 0.764442687671884 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_309 (SP240) 0.112084759862719 -0.640805443730419 0.600725611893826 0.764792300024937 0.186582289224135 -0.837881662393208 0.855384704301599 0.419930460707223 1 1 FALSE FALSE TRUE TRUE Treponema amylovorum (SP26) -0.292699360641964 0.646834181869142 0.555777644817864 0.696056726219289 -0.526648315870792 0.929283717122446 0.612723359324795 0.379927883406599 1 1 FALSE FALSE TRUE TRUE Veillonella dispar (SP268) -0.325767663795729 0.690847989618866 0.572991769107821 0.762500126564293 -0.568538121067544 0.906029999931567 0.577103627987618 0.377582916950786 1 1 FALSE FALSE TRUE TRUE Streptococcus mutans (SP270) 0.139679840469639 -0.0680785410538704 0.203195280841576 0.447378581129984 0.687416754420308 -0.152172106411349 0.522400504478758 0.885000999238351 1 1 FALSE FALSE TRUE TRUE Streptococcus anginosus (SP272) -0.713545473460096 1.25488606088753 0.380050171968222 0.683519428152798 -1.87750335637201 1.83591864283776 0.0830665982943568 0.0893402440301343 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_942 (SP273) -0.0416075023461111 0.218702026342143 0.294899892316616 0.634150893856175 -0.141090259542854 0.344873796537996 0.891286685976685 0.739080843671334 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_317 (SP274) 0.0502714819026199 -0.103012429077648 0.460024655450074 0.593222616899524 0.10927997294718 -0.17364885650524 0.914260026987753 0.864192390089607 1 1 FALSE FALSE TRUE TRUE Bulleidia extructa (SP276) -0.461557624140118 0.889236025805865 0.314885549080688 0.556907111146649 -1.46579487527338 1.59674029655496 0.176749567382352 0.144788039196928 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_215 (SP29) -0.181877296119979 0.387079435636728 0.32546029179906 0.530229433804976 -0.558830987075593 0.730022535450379 0.583564129653748 0.475316742766245 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP3) 0.0935683215079257 -0.153920108199936 0.578459048816891 0.742816868675986 0.161754443463714 -0.20721137966924 0.873986183665509 0.839055295057719 1 1 FALSE FALSE TRUE TRUE Haemophilus parahaemolyticus (SP30) 0.954093980764008 -1.60484162502343 0.229651534148246 0.691891071100551 4.15452909688866 -2.31950041278999 0.00246770301274683 0.0455230248296006 0.666279813441643 1 FALSE FALSE FALSE FALSE Campylobacter gracilis (SP300) -0.244660487955964 0.395960007503422 0.277935010777331 0.545136545301521 -0.880279484299926 0.726350142759942 0.392593481845289 0.478806149490318 1 1 FALSE FALSE TRUE TRUE Prevotella salivae (SP301) 0.560058332916074 -1.1792291145505 0.558320663468876 0.79884223434605 1.00311231441158 -1.47617272078239 0.329872092479794 0.158180663516173 1 1 FALSE FALSE TRUE TRUE Shuttleworthia satelles (SP303) -0.315669107242123 0.556631005668604 0.412932414115573 0.553260566819369 -0.76445707929766 1.006091955674 0.459364108605576 0.33422819983655 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_443 (SP304) -0.187409486933523 0.301684035873106 0.504525624216002 0.743063334322955 -0.371456825854473 0.406000433526957 0.716772933140778 0.691888602225672 1 1 FALSE FALSE TRUE TRUE Leptotrichia hofstadii (SP309) -0.103772911175835 0.222192400754645 0.410775517347073 0.599990348352875 -0.252626816335199 0.370326625027585 0.803585878262626 0.715712783664213 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-2] bacterium_HMT_091 (SP31) -0.159572998304613 0.1707896010352 0.310128591900201 0.525433063575013 -0.514538170527543 0.325045401355519 0.616220184442376 0.750743691584948 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_231 (SP312) -0.29352187687129 0.484469114978559 0.341942330703234 0.491792670164012 -0.85839584782509 0.985108449902251 0.412950419492381 0.350311479991382 1 1 FALSE FALSE TRUE TRUE Cardiobacterium hominis (SP315) -0.505394783563792 0.944427478542354 0.365681020456897 0.653653396554533 -1.38206457346988 1.44484444435004 0.188606539706687 0.170510471653976 1 1 FALSE FALSE TRUE FALSE Filifactor alocis (SP325) -0.069612285770131 0.157899287146987 0.474768215883991 0.641932231244466 -0.146623728044888 0.245975010229474 0.885678404410883 0.809542507116858 1 1 FALSE FALSE TRUE TRUE Schaalia sp._HMT_172 (SP326) -0.131630750873593 0.215088037312901 0.617181264221204 0.823057248455177 -0.213277295511704 0.26132816121431 0.833804528611996 0.797173512357396 1 1 FALSE FALSE TRUE TRUE Selenomonas noxia (SP329) -0.168457600777263 0.250524938822829 0.413222434338847 0.549446487027302 -0.407668090544972 0.455958759838937 0.689682972590869 0.655412170628034 1 1 FALSE FALSE TRUE TRUE Fusobacterium sp._HMT_248 (SP330) 0.588027796442669 -1.19180466620484 0.279451890850072 0.633561061580044 2.10421834919038 -1.88112044517476 0.0800097079025716 0.10898559110888 1 1 FALSE FALSE TRUE TRUE Prevotella koreensis (SP331) 0.00914109729155027 -0.00446349139212933 0.47567830394643 0.726438393133321 0.0192169733530241 -0.00614434951996013 0.985138659462801 0.99524800575026 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_472 (SP337) 0.132436882917212 -0.229842769485758 0.332970515936662 0.530419169183084 0.397743573615402 -0.433322894117395 0.700088336819645 0.674980267657268 1 1 FALSE FALSE TRUE TRUE Veillonellaceae_[G-1] bacterium_HMT_155 (SP34) 0.0830129052155424 -0.217207753450885 0.270561730963223 0.429521354524502 0.306816876577516 -0.505697216594371 0.765962796153597 0.625221869546965 1 1 FALSE FALSE TRUE TRUE Campylobacter concisus (SP340) 0.198524054472842 -0.415990082281452 0.329123211418025 0.584190399687433 0.603190682351156 -0.712079627641989 0.554344920120249 0.486073957875657 1 1 FALSE FALSE TRUE TRUE Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP342) -0.156138253746779 0.142615701474372 0.351048119755893 0.508737844752062 -0.44477735375809 0.280332400951765 0.668268147068849 0.786335122721322 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_909 (SP350) -0.311073578370334 0.55803759803392 0.321721358795316 0.610039205198519 -0.966903719215744 0.914756942305573 0.352675741691911 0.378333903858654 1 1 FALSE FALSE TRUE TRUE Stomatobaculum longum (SP352) -0.204555675441835 0.158482126095208 0.62737008952113 0.735937323121489 -0.326052642385249 0.215347314392215 0.749573628831214 0.832838283355694 1 1 FALSE FALSE TRUE TRUE Dialister invisus (SP354) -0.182162322981496 0.38768115901104 0.540921529598223 0.721340592468843 -0.336762936976828 0.537445366389506 0.740417216279352 0.597925495558849 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP357) 0.0204762126513504 -0.247479648929782 0.43625713502536 0.603561253341121 0.0469361094808456 -0.410032366325396 0.963589155849517 0.691370634364841 1 1 FALSE FALSE TRUE TRUE Streptococcus hongkongensis (SP397) -0.162812548761445 0.275767705811914 0.53467781755564 0.666500966572117 -0.30450589759973 0.413754397432034 0.765958705988122 0.686352821118372 1 1 FALSE FALSE TRUE TRUE Lautropia mirabilis (SP399) -0.472032966370366 0.982967275359015 0.42297802780017 0.854319498981841 -1.11597514609759 1.15058508734787 0.281991956390338 0.267915634679669 1 1 FALSE FALSE TRUE TRUE Mogibacterium timidum (SP401) -0.469469182647637 0.762164684813526 0.335676917008586 0.511648268070508 -1.39857451871088 1.48962623813376 0.204650284843033 0.179935818448832 1 1 FALSE FALSE TRUE TRUE Veillonella sp._HMT_780 (SP402) -0.216736992945569 0.460672128935196 0.711437145948291 1.14767624525433 -0.304646719924465 0.401395542375377 0.764333169664139 0.693129636988009 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-5] bacterium_HMT_507 (SP403) -0.512568171615095 0.690497452750515 0.249407644628662 0.413280408896757 -2.05514218450781 1.6707722841104 0.10905188967165 0.170086910449811 1 1 FALSE FALSE TRUE TRUE Peptidiphaga gingivicola (SP409) -0.646102745078118 1.12331813383336 0.312937503557897 0.481687112320304 -2.06463826716948 2.33204938455234 0.0612663837065717 0.0379291077494306 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_308 (SP411) 0.655016513571173 -1.37969638482237 0.620566824892077 0.855318828321379 1.05551326190388 -1.61307846751149 0.305961141809179 0.125135240860656 1 1 FALSE FALSE TRUE TRUE Mitsuokella sp._HMT_521 (SP415) 0.792343280611659 -1.36745940659742 0.380081536937631 0.505811659493713 2.08466658758454 -2.70349522580433 0.0755627213113024 0.0304844757982022 1 1 FALSE FALSE TRUE FALSE Butyrivibrio sp._HMT_080 (SP417) -0.338516714514487 0.534756071306153 0.353358148195049 0.529603966284992 -0.957998892182416 1.00972822212285 0.358645956774238 0.334320790439275 1 1 FALSE FALSE TRUE TRUE Cryptobacterium curtum (SP423) 0.0399145787466114 -0.446177066690798 0.331199084230157 0.472633447311193 0.120515365673155 -0.944023469411854 0.908767977959218 0.388503583787961 1 1 FALSE FALSE TRUE TRUE Johnsonella sp._HMT_166 (SP424) -0.796659705167266 1.14503916768212 0.263645946347091 0.46816263292126 -3.02170284127358 2.44581495224696 0.0233458669527944 0.0500745465169882 1 1 FALSE FALSE FALSE FALSE Prevotella saccharolytica (SP429) -0.172569540435397 -0.0118434711320296 0.282699631959422 0.477245753739457 -0.610434259285371 -0.0248162944127427 0.556672669200557 0.980743019079888 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-3] bacterium_HMT_280 (SP430) -0.17342885271893 0.139403445373573 0.21387273011888 0.395099667398623 -0.81089745580248 0.352831087637759 0.444116476833118 0.73460053177382 1 1 FALSE FALSE TRUE TRUE Leptotrichia trevisanii (SP464) 0.0946882704916623 -0.0537212518264355 0.186666196398287 0.436318296458727 0.507259869856817 -0.123123995171532 0.621987564993845 0.904229738767495 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum orale (SP468) -0.113394593968481 0.242504842205788 0.691368780974012 0.917809801094769 -0.164014628790049 0.264221238339933 0.871653853818097 0.794785950990188 1 1 FALSE FALSE TRUE TRUE Corynebacterium matruchotii (SP469) -0.636633963663507 1.22509446289273 0.366481958134995 0.639580083063695 -1.73714953637363 1.91546687480374 0.101568963197567 0.0734810387320075 1 1 FALSE FALSE TRUE FALSE Scardovia wiggsiae (SP482) 0.0780561703864086 -0.188423361056564 0.332409468716931 0.595856764198204 0.234819334983742 -0.316222576259766 0.820247670414342 0.759926763882423 1 1 FALSE FALSE TRUE TRUE Leptotrichia shahii (SP483) -0.384908141230747 0.699825585661827 0.392960226998262 0.600940907197929 -0.979509158397471 1.16454975402653 0.342863343345425 0.262388996454062 1 1 FALSE FALSE TRUE TRUE Haemophilus parainfluenzae (SP484) -0.117480486962984 0.251130616305292 0.416728105795057 0.646686695845886 -0.281911599744029 0.388334286012804 0.78141440261235 0.702588826303613 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] sp._HMT_931 (SP486) -0.23533628058242 0.447823551481814 0.550401635546624 0.891092766460129 -0.427571913642115 0.50255547832668 0.676535212622022 0.624372162601976 1 1 FALSE FALSE TRUE TRUE Abiotrophia defectiva (SP487) -0.589681669549983 1.2593796923811 0.332297884655307 0.839655598578546 -1.77455739798543 1.49987649044811 0.0949971174992161 0.153119360751984 1 1 FALSE FALSE TRUE TRUE Kingella sp._HMT_012 (SP488) -0.775447516284438 1.47348616108548 0.287089022820397 0.543412903054608 -2.70106989346492 2.71154062187847 0.0206172916127533 0.02023509402681 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP489) -0.0603070696115312 0.124147155000286 0.645514370842041 0.845198192840707 -0.0934248288428709 0.14688525845403 0.926725951197541 0.885057471632327 1 1 FALSE FALSE TRUE TRUE Treponema lecithinolyticum (SP490) -0.107808506522016 0.273742583271835 0.370088128081089 0.6149130340081 -0.291304957770475 0.445172842552284 0.776770948391648 0.665676434444689 1 1 FALSE FALSE TRUE TRUE Capnocytophaga granulosa (SP491) -0.167539850633259 0.356811495164763 0.311995757256666 0.532246609508141 -0.536994003080084 0.670387539893394 0.598230484452201 0.511615936991656 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum (SP51) 0.0392184035611145 -0.0796781525789156 0.351703677985408 0.46724607189535 0.111509790815272 -0.170527174804716 0.912518118649878 0.866608643466225 1 1 FALSE FALSE TRUE TRUE Lancefieldella parvula (SP515) -0.158438096758715 0.260895689001015 0.683556926577219 0.814893406057771 -0.231784787189654 0.320159283486114 0.819643577703942 0.752990595385914 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_218 (SP517) 0.146684386664022 -0.409601839834162 0.624206550035123 0.796741157588029 0.234993347403625 -0.514096499136743 0.81761623010938 0.615203031741751 1 1 FALSE FALSE TRUE TRUE Streptococcus intermedius (SP518) -0.576421831853636 1.19876808001661 0.312105830850212 0.559741435831934 -1.84687940716582 2.14164613029747 0.0860071241067458 0.0502930703361644 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_300 (SP52) 0.487936006927403 -0.867393994826644 0.346570233415834 0.50565948015908 1.40789935165017 -1.71537176471756 0.186788738028826 0.114271943958113 1 1 FALSE FALSE TRUE TRUE Oribacterium parvum (SP521) -0.592534386205604 1.08741090306725 0.536944406058354 0.724084392598636 -1.10353023426639 1.50177370784734 0.288404465224809 0.155371271800721 1 1 FALSE FALSE TRUE TRUE Prevotella nigrescens (SP527) 0.661800700713801 -1.24358504814647 0.775033018005526 0.996563284369154 0.853900008565935 -1.2478736349731 0.405763828816285 0.230031839920072 1 1 FALSE FALSE TRUE TRUE Prevotella pallens (SP530) 0.0599097779309315 -0.230387029050689 0.459809397024314 0.617469781561728 0.130292634988849 -0.373114662336974 0.897958958416154 0.713960124514239 1 1 FALSE FALSE TRUE TRUE Rothia aeria (SP532) -1.16042785913582 2.22064592338662 0.38514367926076 0.616642835109214 -3.01297391498967 3.60118661395509 0.00873874924495559 0.00261927958621603 1 0.707205488278328 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_847 (SP538) -0.518689219919142 1.07109575428448 0.407875684442283 0.660913339910227 -1.27168458357203 1.62062964931222 0.222849409479515 0.125924389686006 1 1 FALSE FALSE TRUE FALSE Corynebacterium durum (SP55) -0.595350498607147 1.25996730755408 0.451533662033875 0.736937319716591 -1.31850745285627 1.70973470042016 0.20482239966627 0.105503128876982 1 1 FALSE FALSE TRUE TRUE Leptotrichia wadei (SP550) 0.0449193705671891 -0.0657721473129057 0.41319544458753 0.59776422561911 0.108712163107291 -0.110030250212423 0.914782497559633 0.91375366702977 1 1 FALSE FALSE TRUE TRUE Prevotella intermedia (SP551) -0.219903100864493 0.434427589982818 0.85425539234787 0.926342818343738 -0.257420793400089 0.468970646050408 0.801215099824315 0.647495998260294 1 1 FALSE FALSE TRUE TRUE Porphyromonas gingivalis (SP553) 0.478309636354776 -1.63315584512057 0.452956649031805 0.727837129976738 1.05597221583382 -2.24384794050389 0.313621497692203 0.0463874435143401 1 1 FALSE FALSE TRUE FALSE Kingella oralis (SP564) -0.163595582983364 0.318446309948248 0.277288942654661 0.653027697741674 -0.589982353487164 0.487645946794464 0.565316886384481 0.633921287906088 1 1 FALSE FALSE TRUE FALSE Prevotella oulorum (SP567) 0.437590016439073 -0.851113439056673 0.325559277386344 0.603885318846115 1.34411779001395 -1.40939581158051 0.197660121895971 0.177858290303198 1 1 FALSE FALSE TRUE TRUE Neisseria sp._HMT_018 (SP568) -0.202573322727924 0.56511596703759 0.371391328849245 0.611466851014918 -0.545444405919754 0.9241972252455 0.600321075040684 0.382414041792387 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia goodfellowii (SP569) -0.303029366820003 0.72006498450831 0.346660437830115 0.591100050841652 -0.874138879869834 1.21817784228411 0.397903890622791 0.244803893321667 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_subsp._vincentii (SP585) 0.106559248868512 -0.252100835527786 0.520816232074512 0.629601209413223 0.20460047576487 -0.400413518523478 0.840464301035674 0.694147625259918 1 1 FALSE FALSE TRUE TRUE Prevotella aurantiaca (SP588) 0.480801185286256 -0.963226893628452 0.57053241112312 0.779198753415471 0.842723701427893 -1.23617612246725 0.413549056113662 0.236732296792428 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP589) -0.540590401734595 0.969663120619842 0.359383692894596 0.538294532984616 -1.50421516730629 1.80136163606097 0.170937530947613 0.109325239690652 1 1 FALSE FALSE TRUE TRUE Prevotella jejuni (SP60) 0.319023478798554 -0.670377755857954 0.489928215242104 0.649985780831436 0.651163719241817 -1.03137295557517 0.523646110134436 0.316816900034848 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_225 (SP609) -0.766303502260784 1.62086809304509 0.437182033598207 0.616174752709903 -1.75282478091279 2.63053311729603 0.0976455812442317 0.0175352451992463 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_417 (SP61) 0.155036382153792 -0.324182774052345 0.448252964607567 0.598846071904317 0.345868057536489 -0.541345746865218 0.73368515828859 0.595293198020701 1 1 FALSE FALSE TRUE TRUE Stomatobaculum sp._HMT_097 (SP610) -0.336912290862535 0.714375535648789 0.513913610912337 0.683479600593942 -0.655581568007945 1.04520388761859 0.520867499557144 0.310563924240216 1 1 FALSE FALSE TRUE TRUE Prevotella baroniae (SP614) 0.144580435951777 -0.46194164403931 0.422356467999162 0.58899130861882 0.342318507957746 -0.784292802422771 0.738032212779681 0.448074078858151 1 1 FALSE FALSE TRUE TRUE Fannyhessea sp._HMT_416 (SP615) -1.18713047446031 1.55717035184849 NA 0.384995902349568 NA 4.04464136461018 1 0.154303901927617 1 1 FALSE FALSE TRUE TRUE Neisseria oralis (SP62) -0.545718697207111 1.17145374769535 0.309226627069433 0.660494521278612 -1.7647855955321 1.77360100645136 0.0966768646814168 0.0951603810043789 1 1 FALSE FALSE TRUE FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP629) -0.445847044414238 1.33293845153161 0.514670257930475 0.657213960346591 -0.86627707263874 2.02816515161769 0.403326652512141 0.0653392052115819 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP63) -0.396078344057533 0.613502914551492 0.487763580935356 0.689625683469641 -0.812029350977776 0.889617265216747 0.440266156161614 0.399631729256171 1 1 FALSE FALSE TRUE TRUE Fretibacterium sp._HMT_360 (SP637) -0.618533554181304 1.4918566362233 0.21736578957277 0.505208130802694 -2.84558833014626 2.95295452559914 0.0248449081850937 0.021317228029465 1 1 FALSE FALSE FALSE FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP643) 0.290745818090139 -0.749768119408907 0.35345578393698 0.557114015371141 0.822580450803937 -1.34580731900888 0.422837049436677 0.197126143343059 1 1 FALSE FALSE TRUE TRUE Desulfobulbus sp._HMT_041 (SP645) -0.254929862999707 0.35164692602451 0.226009590042608 0.550996643109262 -1.12796037969737 0.638201576038965 0.292026347761888 0.541176295456419 1 1 FALSE FALSE TRUE TRUE Fretibacterium fastidiosum (SP649) -0.554853140039096 1.17604551323848 0.258928826394424 0.503310897610034 -2.14287898248105 2.33661841780681 0.0553277658048455 0.0394065878585572 1 1 FALSE FALSE TRUE FALSE Pseudoleptotrichia sp._HMT_221 (SP650) 0.347622859896691 -0.671179125971909 0.349956537809488 0.656550973573434 0.993331520744251 -1.02228029960699 0.33533430354078 0.321857304993808 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia sp._HMT_219 (SP651) -0.620003378440066 1.23743694783892 0.243353791479658 0.445740845992952 -2.54774488891369 2.77613541357726 0.0271036977668733 0.0180280866472653 1 1 FALSE FALSE FALSE FALSE Capnocytophaga leadbetteri (SP652) -0.228864163177236 0.486273932757604 0.42243769380003 0.594140245137057 -0.54177022206161 0.818449746061941 0.595007075427315 0.424425024464559 1 1 FALSE FALSE TRUE TRUE Prevotella multiformis (SP660) -0.116059579322902 0.286049388145611 0.399160008270657 0.714489184232655 -0.290759537323704 0.400355099080781 0.775822063176297 0.69539640251241 1 1 FALSE FALSE TRUE TRUE Prevotella nanceiensis (SP661) -0.0510120824417907 0.110808428982773 0.461680610653095 0.845898405017087 -0.110492148174966 0.130994961481852 0.913313033201787 0.897317010332192 1 1 FALSE FALSE TRUE TRUE Rothia dentocariosa (SP662) -0.379901299192582 0.80513010879 0.589392417647028 0.91175229353695 -0.644564279787011 0.88305794731447 0.527812229354485 0.389521980654275 1 1 FALSE FALSE TRUE TRUE Parvimonas micra (SP663) -0.496514303236274 1.06659731585559 0.43735133860221 0.772040064070627 -1.13527559975728 1.38153104416873 0.274075319277444 0.187348483869752 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP664) 0.565511556003132 -2.43181647372792 0.298793002601825 0.464840244406144 1.89265327862025 -5.23151018654739 0.107256817264782 0.00195433500018418 1 0.529624785049914 FALSE FALSE TRUE FALSE Solobacterium moorei (SP674) 0.0909820288378485 -0.18895691705202 0.444666942938143 0.761803814984989 0.204607134132084 -0.248038816996136 0.840308734502491 0.807075659372971 1 1 FALSE FALSE TRUE TRUE Prevotella multisaccharivorax (SP676) -0.701498912746288 1.58367492212124 0.227257625257824 0.534129595481719 -3.08680033046388 2.96496381312285 0.0214754780542804 0.0251208389062262 1 1 FALSE FALSE FALSE FALSE Ottowia sp._HMT_894 (SP682) -0.550882249729512 1.00397449438111 0.245424098125794 0.424128734118172 -2.24461352384049 2.36714566502673 0.0881698013667563 0.0770602087144743 1 1 FALSE FALSE TRUE TRUE Prevotella maculosa (SP683) 0.188347478158184 -0.396002196753549 0.243310055895832 0.478359588249053 0.774104783563984 -0.827833718569418 0.450898265989427 0.420740943128633 1 1 FALSE FALSE TRUE TRUE Campylobacter sp._HMT_044 (SP684) 0.32499553797635 -1.1086944640563 0.274357014715606 0.548716303054694 1.18457163675306 -2.02052400827935 0.261150021468473 0.0683547144623854 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_238 (SP687) 0.542150904839656 -1.1284862100361 0.174084274014845 0.552207075303858 3.11430143766704 -2.04359245019659 0.0527046721434093 0.133584205354946 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP688) -0.0154025289095245 -0.108460400870257 0.410798717079158 0.630379031551305 -0.0374941017806454 -0.172055851228658 0.97070757140579 0.86626119405927 1 1 FALSE FALSE TRUE TRUE Anaeroglobus geminatus (SP691) -0.162842965239892 0.231679476500627 0.616354627291507 0.84035566328376 -0.264203362852137 0.275692170140581 0.795472761762418 0.786812046437538 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-2] bacterium_HMT_088 (SP694) 0.601143631027804 -0.505708240140101 0.222489039850329 0.552984812097299 2.70190222148561 -0.914506563430028 0.0539878484222648 0.412190627364263 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] bacterium_HMT_274 (SP696) -0.0203541563876775 0.0294286484486155 0.298761639066242 0.649577708083794 -0.0681284131767819 0.0453042770439704 0.94672014286178 0.96455331156963 1 1 FALSE FALSE TRUE TRUE Actinomyces graevenitzii (SP701) -0.534967328140962 1.02176119184764 0.650721519065061 0.895813386968403 -0.822114087927488 1.14059602894021 0.423094720080013 0.270824113679145 1 1 FALSE FALSE TRUE TRUE Oribacterium asaccharolyticum (SP702) 0.040538881197825 -0.135200010548249 0.538436387478772 0.790648295934276 0.0752900103717884 -0.170998927390957 0.941049250307829 0.866671436529588 1 1 FALSE FALSE TRUE TRUE Limosilactobacillus mucosae (SP709) -0.60906142550379 1.35462026000277 0.239070258612587 0.383546170067704 -2.54762524221289 3.53183101727662 0.0514143746167638 0.0167071600965118 1 1 FALSE FALSE TRUE FALSE Selenomonas flueggei (SP718) 0.357508369607893 -0.984377105971585 0.201891480385444 0.42936457191384 1.77079473054213 -2.29263700445485 0.136807476385013 0.070416977376996 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_262 (SP72) -0.532752818634314 1.0380082268408 0.294908626302187 0.426408919604053 -1.80650130623312 2.43430233074077 0.145136559072012 0.0716474316778443 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_473 (SP725) 0.468699694868591 -0.888875299524714 0.636780976434093 0.943520265887205 0.736045378574688 -0.942083950564529 0.473057271179464 0.361076072273147 1 1 FALSE FALSE TRUE TRUE Mycoplasma faucium (SP728) 0.705534169342235 -1.15523453690316 0.315254695907551 0.459055144329762 2.23798147498217 -2.51654850440647 0.0602570644083332 0.0400119275699294 1 1 FALSE FALSE TRUE FALSE Rothia mucilaginosa (SP73) 0.183029587302971 -0.383279540478389 0.366722110085007 0.663385991001385 0.499096133747006 -0.577762487718238 0.624108513505661 0.570998653133226 1 1 FALSE FALSE TRUE TRUE Pseudoramibacter alactolyticus (SP731) -0.634551630577478 0.693272048955515 0.245792638813618 0.414416484358535 -2.58165433122939 1.67288724054646 0.0493330868491058 0.155208157474886 1 1 FALSE FALSE FALSE TRUE Leptotrichia hongkongensis (SP739) -0.411507443773292 0.774841423112299 0.484597287105884 0.677084652622478 -0.849174055907123 1.14437894894116 0.408310836337588 0.269298347913441 1 1 FALSE FALSE TRUE TRUE Dialister pneumosintes (SP757) -0.0600279134426338 -0.0704452397626609 0.489468383729642 0.693446074613588 -0.122639000675047 -0.101587192345007 0.90426862436399 0.920634505911861 1 1 FALSE FALSE TRUE TRUE Streptobacillus felis (SP758) 1.12960832762111 -2.25293675292468 0.293518367180711 0.457233058715396 3.84850985126135 -4.92732690688276 0.03097133813602 0.0160219645340418 1 1 FALSE FALSE FALSE FALSE Lachnoanaerobaculum saburreum (SP76) 0.027372165743792 -0.300844167295207 0.219816720702745 0.460723274920246 0.124522673508568 -0.652982351167921 0.903369015096718 0.528493627186024 1 1 FALSE FALSE TRUE TRUE Lancefieldella rimae (SP771) -0.448916019186893 0.852335239175081 0.468018714834961 0.712465345154648 -0.959183906449543 1.1963181717843 0.35496671537072 0.252936077635091 1 1 FALSE FALSE TRUE TRUE Oribacterium sp._HMT_102 (SP773) 0.0454748129485627 -0.075542100466514 0.394561134182422 0.605280912860064 0.115254162178928 -0.124805026660371 0.911084060804989 0.903757037401369 1 1 FALSE FALSE TRUE TRUE Granulicatella adiacens (SP776) -0.149633975958462 0.319010204184636 0.347790740174547 0.526184301213601 -0.430241402871637 0.606270851199599 0.672424680320853 0.552345328675151 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_304 (SP779) -0.155559914379515 0.310274384249344 0.386191867596878 0.5320335244818 -0.402804738865952 0.583185776782678 0.697641492232713 0.57583504761847 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_951 (SP780) 0.175042944618651 -0.568710107297984 0.220594217904211 0.505171424967421 0.793506494783376 -1.12577647742974 0.457706055765604 0.303265325899576 1 1 FALSE FALSE TRUE TRUE Capnocytophaga sp._HMT_332 (SP787) -0.230355077394107 0.349904557509166 0.353739282737895 0.496324368547375 -0.651200159652016 0.704991694309217 0.531190668203314 0.498652642205724 1 1 FALSE FALSE TRUE TRUE Porphyromonas sp._HMT_930 (SP8) 0.30591470449549 -0.546168305208649 0.598052107195295 1.18965632214521 0.511518479435093 -0.459097551991981 0.616435107681524 0.65274668395135 1 1 FALSE FALSE TRUE TRUE Veillonella sp._HMT_917 (SP803) 0.802697724542923 -1.90063313977559 0.405069021820695 0.509247145355706 1.98163197208953 -3.73224112714074 0.10436015084624 0.0135395974487702 1 1 FALSE FALSE TRUE FALSE Cloacibacterium sp._HMT_206 (SP809) 1.33603231376354 -5.01573686941272 0.532019500068378 0.61940130701026 2.5112468877397 -8.09771760673673 0.128667300982291 0.0149099569171332 1 1 FALSE FALSE TRUE FALSE Pseudostreptobacillus hongkongensis (SP819) 1.2585086507112 -1.67038399127189 0.488405065729248 0.640593209097728 2.57677231261328 -2.60755806891024 0.036644298799692 0.0350376104099334 1 1 FALSE FALSE FALSE FALSE Phocaeicola abscessus (SP820) -0.632223481024046 1.22389417525531 0.343936915762498 0.557927886462088 -1.83819605296636 2.1936422339744 0.0991956195724315 0.0559172505424838 1 1 FALSE FALSE TRUE TRUE Peptostreptococcus stomatis (SP833) -0.469923210893346 0.864098406433454 0.394621326610721 0.556990312568833 -1.19082061511822 1.5513706198017 0.252228042094939 0.141652606635502 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_914 (SP836) 0.608254846274709 -1.29799575301019 0.433445819912532 0.606470622402225 1.40330075486125 -2.14024505897556 0.183959442820666 0.0518716466387054 1 1 FALSE FALSE TRUE TRUE Catonella morbi (SP84) -0.432473087206958 0.794898795517226 0.325193847956323 0.532965671350205 -1.32989320039364 1.49146340608288 0.203422882012851 0.156569521068519 1 1 FALSE FALSE TRUE TRUE Megasphaera micronuciformis (SP851) -0.123061271323179 0.181297831771059 0.623324280312911 0.731010921615368 -0.197427366797587 0.24800974432835 0.845979412331032 0.8072817338767 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-2] bacterium_HMT_096 (SP852) -0.0629589596167702 0.129315133564099 0.729317995361706 0.944038398564759 -0.0863258002917447 0.136980798408941 0.93227851289125 0.892754847026145 1 1 FALSE FALSE TRUE TRUE Capnocytophaga gingivalis (SP860) -0.181352622174964 0.327242948080221 0.258346500413734 0.529858959237477 -0.701974371181853 0.617603878117222 0.494200985879417 0.546751682518324 1 1 FALSE FALSE TRUE TRUE Alloprevotella rava (SP870) 0.447284752128239 -0.941151555109511 0.498622309956043 0.683729537461629 0.897041193699635 -1.37649685079216 0.382225042350466 0.186528606972007 1 1 FALSE FALSE TRUE TRUE Riemerella sp._HMT_322 (SP876) 0.394609347643115 -0.829947923418694 0.449622564564818 0.74877897645317 0.877645782802405 -1.10840174406339 0.392370882633826 0.28312395545818 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP89) 0.878940569033127 -2.10876973325569 0.655070213712642 0.798992082420006 1.34175016759148 -2.63928739677695 0.204515595393842 0.0216021544174217 1 1 FALSE FALSE TRUE FALSE Leptotrichia sp._HMT_498 (SP91) -0.347480817368196 0.736686869382962 0.475179943064355 0.725160734428667 -0.731261540896173 1.01589459330472 0.474579216175895 0.323920834761272 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_396 (SP96) -0.0363254416537917 -0.23012934398086 0.428328775695244 0.651262850635036 -0.0848073809536374 -0.35335862279948 0.933706672854459 0.729483879147592 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_305 (SP99) 0.525789676165129 -1.90236173760626 0.332828307282484 0.489366496971416 1.57976249213343 -3.88739676577691 0.158172004053209 0.00599548719258009 1 1 FALSE FALSE TRUE FALSE Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP10) -0.329563632431134 0.698861701182499 0.248663466229366 0.445818150261924 -1.32533997626795 1.56759364950016 0.202595541297606 0.135400379802551 1 1 FALSE FALSE TRUE FALSE Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP100) -0.089689108971154 0.192459929433651 0.44669719539612 0.798232718124067 -0.200782789539612 0.24110754303075 0.843250979606188 0.812355738813121 1 1 FALSE FALSE TRUE TRUE Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP101) 0.252843450156611 -0.530664362058298 0.444403308472043 0.580426210799167 0.568950422592359 -0.914266709850415 0.576830039214414 0.373362588337586 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP102) 0.00158663574189793 -0.000233309405013076 0.458771114727351 0.637136787041658 0.00345844734109051 -0.000366184169174054 0.997280824135735 0.999712090098639 1 1 FALSE FALSE TRUE TRUE Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP103) -0.111871261732074 0.239288918595594 0.412864149256774 0.538791664574057 -0.270963855625299 0.444121418962122 0.789681421764237 0.662556315466744 1 1 FALSE FALSE TRUE TRUE Treponema medium_sp._HMT_237 (SPP105) -0.0443185774245671 -0.0835522672164469 0.328204599765719 0.563374205672925 -0.135033383006219 -0.148306873788529 0.89526480184974 0.88504851517028 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_subsp._animalis_simiae (SPP106) 0.518171923077082 -1.09080224933485 0.47127095334954 0.669225499302321 1.09952017919669 -1.62994723074962 0.286868719446005 0.121499906046643 1 1 FALSE FALSE TRUE TRUE Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP107) -0.188297068465771 0.400632288366733 0.412304096024561 0.640881668509743 -0.456694634570292 0.625126771527625 0.653671798111539 0.540189092072249 1 1 FALSE FALSE TRUE TRUE Kingella_Neisseria denitrificans_elongata (SPP110) -0.355124037252807 0.75282255580603 0.502670968674346 0.710894859659461 -0.706474133943616 1.05897875835908 0.489463820250794 0.3044250387381 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter_Peptostreptococcaceae_[G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP112) 0.187289506259999 -0.473028092453283 0.458187237765027 0.655723914845857 0.408761944513275 -0.721383011575045 0.690559525548511 0.485724553114939 1 1 FALSE FALSE TRUE TRUE Prevotella scopos_sp._HMT_314 (SPP114) 1.03775651973964 -2.18770306451135 0.485664038354262 0.701205946313115 2.13677859134107 -3.11991516331845 0.0474477119065132 0.00623268567713877 1 1 FALSE FALSE TRUE TRUE Prevotella jejuni_scopos_sp._HMT_314 (SPP115) 0.550873832954643 -1.34543805477139 0.468043558225155 0.669088830970879 1.17697129524351 -2.01085116429024 0.256419994373175 0.061504615277628 1 1 FALSE FALSE TRUE FALSE Fusobacterium hwasookii_sp._HMT_370 (SPP118) 0.0633269659676196 -0.130574006548204 0.471230793775758 0.602291687235181 0.134386306676203 -0.216795299213913 0.894675314836812 0.830948242817778 1 1 FALSE FALSE TRUE TRUE Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP119) -0.172632196192068 0.367562002455581 0.385283354212144 0.640321164114212 -0.448065545279212 0.574027570936293 0.659763647544619 0.573466497500793 1 1 FALSE FALSE TRUE TRUE Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP12) 0.233229660274145 -0.459212716849731 0.439419186874834 1.08939154371074 0.530768039358688 -0.421531376391575 0.604529025533778 0.680253745952528 1 1 FALSE FALSE TRUE TRUE Mogibacterium diversum_neglectum_pumilum_vescum (SPP120) -0.267071281392361 0.50883179522951 0.637895429909919 0.896225892258585 -0.418675646304718 0.567749492203578 0.681805201309377 0.579196924709874 1 1 FALSE FALSE TRUE TRUE Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP121) 0.00374566002774001 -0.00479124956401323 0.270223796388161 0.432481035276406 0.0138613256042025 -0.0110785194568152 0.989101992908907 0.991289775184057 1 1 FALSE FALSE TRUE TRUE Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP124) -0.809327766984197 1.57048206953411 0.398297570781442 0.747098322734461 -2.03196762007946 2.10210894837238 0.0591046385680535 0.0517317489660383 1 1 FALSE FALSE TRUE FALSE Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP125) -0.603664637479292 1.21677682728899 0.274112827962336 0.530338197050343 -2.20224876729314 2.29434129779169 0.0479429604488046 0.0406113409758392 1 1 FALSE FALSE FALSE FALSE Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP127) 0.245053469855747 -0.655227040158368 0.465483798464128 0.885849118769047 0.526448977739516 -0.739659865631356 0.606273894010799 0.470924785211494 1 1 FALSE FALSE TRUE TRUE Porphyromonas pasteri_sp._HMT_278 (SPP13) 0.290545130745838 -0.610256798857776 0.309500393342664 0.67432583100699 0.938755287539039 -0.904988020326112 0.361003893520561 0.378119082589799 1 1 FALSE FALSE TRUE TRUE Porphyromonas endodontalis_sp._HMT_285 (SPP130) -0.0180781951744045 0.0708080676999513 0.8272120304802 0.99253352541554 -0.0218543668470464 0.0713407314582209 0.98285219609341 0.944069082462558 1 1 FALSE FALSE TRUE TRUE Treponema maltophilum_sp._HMT_260 (SPP131) -0.0665662251715009 -0.125541771151664 0.234390243319295 0.503591204326081 -0.283997423394548 -0.249293017974108 0.783624145220929 0.809415459461401 1 1 FALSE FALSE TRUE TRUE Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP132) -0.37315963679074 0.884911425937744 0.659187595221938 0.861560961480226 -0.566090198746994 1.02710250986465 0.57970371510977 0.320651158654849 1 1 FALSE FALSE TRUE TRUE Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP133) 0.195479798328398 -0.409563319309848 0.434716040373791 0.616153096718043 0.449672384208126 -0.664710315490417 0.65862739059695 0.515152285651369 1 1 FALSE FALSE TRUE TRUE Moraxella bovoculi_equi_lacunata_sp._HMT_276 (SPP14) 1.06257491455332 -2.91726076794633 0.497220499619948 0.595249678482884 2.13702957815597 -4.90090271931194 0.0994190739152053 0.0080387762194061 1 1 FALSE FALSE TRUE FALSE Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP143) 0.0166280384210234 -0.188625544645706 0.442015868308997 0.608287102303929 0.0376186458749472 -0.310092954348816 0.970487835396629 0.760756867668081 1 1 FALSE FALSE TRUE TRUE Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP146) -1.0399350734762 2.09509545153919 0.310352559894125 0.50673190397033 -3.35081841706404 4.13452445982533 0.0122370481656385 0.00437909106841879 1 1 FALSE FALSE FALSE FALSE Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP15) -0.213376512158405 0.835320857075165 0.318780627477946 0.496047927365171 -0.669352193219981 1.68395191471133 0.51842560993317 0.123096787690596 1 1 FALSE FALSE TRUE TRUE Catonella morbi_sp._HMT_164 (SPP155) 0.599934451518893 -1.238858315738 0.40861424608754 0.637503430001277 1.46821716879241 -1.94329670623972 0.170050824247608 0.0780027443029582 1 1 FALSE FALSE TRUE TRUE Schaalia odontolytica_sp._HMT_180 (SPP158) -0.386305975610171 0.818651092338244 0.680569390786446 0.981120213452548 -0.567621730921174 0.834404470638132 0.577711950853857 0.415624955184971 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum gingivalis_umeaense (SPP160) -0.240633929180397 0.511121216542053 0.300235449252982 0.535633175515079 -0.801484067851147 0.954237414533828 0.433911962167114 0.353336357517277 1 1 FALSE FALSE TRUE TRUE Campylobacter rectus_showae (SPP163) -0.0535395379352759 0.116144168357909 0.553671352877553 0.739149358246628 -0.0966991296497805 0.157132204827209 0.924096192629339 0.876991795789756 1 1 FALSE FALSE TRUE TRUE Prevotella jejuni_veroralis (SPP19) 0.69627881028788 -1.67259925377117 0.520982736266536 0.766366652939972 1.33647194392188 -2.18250526344624 0.200091114273377 0.0443230620792496 1 1 FALSE FALSE TRUE TRUE Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP2) -0.091818890630435 0.203975265609845 0.453072270789157 0.686112206168252 -0.202658376047834 0.297291410611962 0.841956668220672 0.770069130351888 1 1 FALSE FALSE TRUE TRUE Eikenella_Neisseria canis_halliae (SPP20) 0.0464077799498915 0.0401291514857454 0.382498215243506 0.624857580995441 0.121328095401301 0.0642212765056271 0.905619143304009 0.949946253144111 1 1 FALSE FALSE TRUE TRUE Eikenella_Kingella halliae_sp._HMT_012 (SPP21) -0.00305065790084589 -0.0437705831356095 0.30170003929322 0.673569581368547 -0.0101115595078892 -0.0649830163747555 0.992085807750921 0.949176185876039 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 (SPP22) -0.60227795859445 2.09413293066772 0.327727728231877 0.454513056843881 -1.83773878958549 4.60742084112894 0.12551206889433 0.00580113817061141 1 1 FALSE FALSE TRUE FALSE Leptotrichia sp._HMT_215_sp._HMT_217 (SPP23) -0.0400732830643714 -0.190102739389167 0.279937137521386 0.487091445694663 -0.143151006755258 -0.390281416496758 0.888546588468624 0.703167808254975 1 1 FALSE FALSE TRUE TRUE Veillonella parvula_rogosae_tobetsuensis (SPP24) 0.119905608022305 -0.250017806441429 0.217064557904269 0.497311678190497 0.552396066773768 -0.502738659488424 0.587867002478823 0.621598420352704 1 1 FALSE FALSE TRUE TRUE Kingella sp._HMT_459_sp._HMT_932 (SPP27) -0.445941411540514 1.59359499708057 0.373676440424311 0.562726365789982 -1.19338915515826 2.83191812923748 0.25782048026301 0.0163160718606866 1 1 FALSE FALSE TRUE FALSE Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP3) 0.132565343597782 -0.27330448199557 0.325737584173756 0.500517250360267 0.406969751231005 -0.546044080995908 0.69470129524305 0.599927631872212 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP30) -0.094616253678076 0.125937394091277 0.385545682536348 0.605053052263591 -0.245408671303577 0.208142729997191 0.809971637453009 0.838343032292331 1 1 FALSE FALSE TRUE TRUE Tannerella sp._HMT_286_sp._HMT_808 (SPP33) -0.458198703988145 1.02732989192056 0.506524296700415 0.676249675557343 -0.904593732172237 1.51915768547152 0.379100220367668 0.148235113695839 1 1 FALSE FALSE TRUE TRUE Prevotella histicola_melaninogenica (SPP34) 0.549267795548664 -1.19646333311264 0.570001350411509 0.769065832341006 0.963625428522448 -1.55573591076158 0.349572894648953 0.139327460395956 1 1 FALSE FALSE TRUE TRUE Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(6 species) (SPP35) 0.38727812935651 -1.35164541309241 0.477700318930688 0.59029048020849 0.810713566663334 -2.28979707179931 0.444215355526745 0.0558242219344157 1 1 FALSE FALSE TRUE TRUE Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_314 (SPP36) -0.0197764325170334 0.0838861800351743 0.374716837365962 0.578263669576108 -0.052777005314333 0.145065623950864 0.958562915690343 0.886470756240216 1 1 FALSE FALSE TRUE TRUE Prevotella melaninogenica_scopos_sp._HMT_314 (SPP37) 0.0131495038577679 -0.0246438087607382 0.449289553841945 0.635327765187624 0.0292673260380181 -0.038789126040258 0.97699223417671 0.969510398838342 1 1 FALSE FALSE TRUE TRUE Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_314_ve ...(6 species) (SPP38) 0.281802699327018 -0.868838657036412 0.443920530251258 0.609793217907128 0.634804385297336 -1.4248086589391 0.537471603786357 0.179697990759988 1 1 FALSE FALSE TRUE TRUE Hallella_Prevotella dentalis_seregens (SPP39) 0.0121121292517067 -0.128175240035568 0.43928409492869 0.620488071919849 0.0275724283932313 -0.20657164228634 0.978678577083754 0.841504990408923 1 1 FALSE FALSE TRUE TRUE Lactobacillus delbrueckii_equicursoris_leichmannii (SPP4) -0.246687298177188 0.0482583171672938 NA 0.350514052662271 NA 0.137678694479596 1 1 1 1 FALSE FALSE TRUE TRUE Selenomonas sp._HMT_442_sputigena (SPP41) 0.0154732323305503 -0.0737396303675196 0.397691825835686 0.631027192457881 0.0389075945879344 -0.11685650198417 0.969477178688789 0.908524026994598 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_306_vespertina (SPP46) 0.498825185191563 -1.04995913602097 0.75036654653034 0.943057044461127 0.664775352123715 -1.11335697261127 0.515111696024255 0.281050416118755 1 1 FALSE FALSE TRUE TRUE Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP5) -0.538104163840256 1.13911393415731 0.351596311119242 0.506322769086123 -1.53046020911682 2.249778212055 0.144298227160926 0.0379997297868832 1 1 FALSE FALSE TRUE TRUE Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP50) -0.263862954546785 0.560160270093318 0.418341004776336 0.676709907576049 -0.630736532001825 0.827770162402073 0.536600871405844 0.419269860847791 1 1 FALSE FALSE TRUE TRUE Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP51) -0.471368439429153 0.998227404844985 0.697609218494902 0.860758592131155 -0.675691242220301 1.15970658204349 0.508324773513099 0.262197801075445 1 1 FALSE FALSE TRUE TRUE Streptococcus lactarius_peroris_sp._HMT_074 (SPP52) -0.049155931728771 0.0742292544027742 0.404091917834798 0.556571772673205 -0.12164542164604 0.133368701122323 0.904908629221279 0.895799906118048 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_912_sp._HMT_913 (SPP54) 0.105941083067934 -0.317452857688916 0.53121894786153 0.744866753676066 0.199430166213779 -0.426187443757187 0.845011789408834 0.676943272496549 1 1 FALSE FALSE TRUE TRUE Prevotella shahii_sp._HMT_317 (SPP55) -0.624862143168848 1.28782810414964 0.24418735225953 0.551321280252656 -2.5589455694033 2.33589406082685 0.0376094204468665 0.0521592909169147 1 1 FALSE FALSE FALSE TRUE Bifidobacterium dentium_moukalabense (SPP57) -1.65679149317454 2.33374862299539 0.220492345452037 0.528051910045843 -7.51405446650723 4.41954394747438 0.000287592631914894 0.00447313597690747 0.0779376032489364 1 FALSE FALSE FALSE FALSE Veillonella atypica_dispar (SPP59) 0.319673757486386 -0.671750566421155 0.689492358576599 0.876924922564926 0.463636403667078 -0.766029735426319 0.648789311883013 0.454164371333833 1 1 FALSE FALSE TRUE TRUE Streptococcus anginosus_constellatus (SPP60) -0.264496904489416 0.475457874502799 0.505876271377008 0.678057274861737 -0.52284900370885 0.701206066404566 0.608716358851577 0.493910093794875 1 1 FALSE FALSE TRUE TRUE Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP64) 0.963236686919888 -1.70045154585425 0.543066408109793 1.10216930367623 1.77369962961353 -1.54282245040075 0.0995240558353035 0.14685902443939 1 1 FALSE FALSE TRUE TRUE Streptococcus dentirousetti_downei_sobrinus (SPP65) -0.0534473357326601 0.0715924600996666 0.342210140134686 0.513123747519503 -0.156182793740783 0.139522796295733 0.879758230608132 0.892485625306427 1 1 FALSE FALSE TRUE TRUE Prevotella loescheii_sp._HMT_472 (SPP68) -0.0469899981155628 0.14882524935886 0.408286514305709 0.577652708952406 -0.115090742576863 0.257637932017596 0.910447226104758 0.801442521316466 1 1 FALSE FALSE TRUE TRUE Centipeda_Selenomonas dianae_noxia_periodontii (SPP7) -0.328158659676628 0.254496293530468 0.379691579977451 0.557584009745471 -0.864276894673609 0.456426814762212 0.409878926623274 0.658898099539609 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter_Peptostreptococcaceae_[G-7] bacterium_HMT_081_stomatis (SPP72) -0.497723712579126 0.890642139359399 0.409928335632768 0.544947091460469 -1.21417250117837 1.63436442420944 0.259304667307161 0.140822953170782 1 1 FALSE FALSE TRUE TRUE Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP76) -0.369487130650701 0.49375730937747 0.307573368186011 0.535571769243038 -1.20129754025793 0.921925571385761 0.268699543475057 0.387238765673832 1 1 FALSE FALSE TRUE TRUE Aggregatibacter aphrophilus_paraphrophilus (SPP78) -0.0290341809016059 0.0214766132556454 0.578406886290657 0.834131034695059 -0.0501968105666984 0.0257472895292726 0.960791408959293 0.979882121372078 1 1 FALSE FALSE TRUE TRUE Leptotrichia buccalis_sp._HMT_225 (SPP8) -0.282650693702254 0.646457908572896 0.351629855724549 0.690800729419552 -0.803830189901934 0.93580953383776 0.433276028389153 0.363281897869386 1 1 FALSE FALSE TRUE TRUE Streptococcus salivarius_thermophilus_vestibularis (SPP80) -0.370607300153292 0.765281194128058 0.657190966089564 0.798746952082381 -0.563926346033772 0.958102177583181 0.58062345148789 0.352266036271943 1 1 FALSE FALSE TRUE TRUE Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP81) -0.239833872703191 0.431494280972097 0.609221384134749 0.824873846139018 -0.393672774707041 0.523103360582699 0.699019234526236 0.608071279246079 1 1 FALSE FALSE TRUE TRUE Lautropia dentalis_mirabilis (SPP82) -0.421764924662997 0.825393713826848 0.432180133458141 0.759382253984581 -0.975900769172785 1.08692784101274 0.34459068661425 0.294226826566073 1 1 FALSE FALSE TRUE TRUE Neisseria cinerea_flavescens_perflava_subflava (SPP87) -0.123324345317921 0.263467650610161 0.473349399454876 0.646489781653983 -0.260535548286203 0.407535676644577 0.797580291259755 0.688700685846159 1 1 FALSE FALSE TRUE TRUE Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP89) -0.462781453020855 0.980099322427464 0.412346976908543 0.628955712939621 -1.12231076965916 1.55829623972515 0.277332195765278 0.137583777489008 1 1 FALSE FALSE TRUE TRUE Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP9) -0.395143412573614 0.837307903705512 0.460213718507567 0.719071407706969 -0.85860850444665 1.16442942207309 0.402500976473538 0.260331462178688 1 1 FALSE FALSE TRUE TRUE Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP96) 0.442240910904772 -0.732532563951283 0.233217699154328 0.470377583556911 1.89625792771468 -1.55732881318876 0.0871585517153494 0.150448977910809 1 1 FALSE FALSE TRUE TRUE Peptococcus sp._HMT_167_sp._HMT_168 (SPP97) -0.266571552665651 0.443060646790742 0.297991088726058 0.646213259208263 -0.894562162262205 0.685626053748228 0.388611647173196 0.505979029939788 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP99) -0.0679188144554247 0.146500418789335 0.492374144026287 0.650637367657883 -0.137941472515256 0.225164471134969 0.891907378293927 0.824535750467921 1 1 FALSE FALSE TRUE TRUE