Taxon	HAKU.07991.04	HAKU.12368.03	HAKU.12653.01	HAKU.13254.01	HAKU.14257.06	HAKU.15133.01	HAKU.15133.05	HAKU.16255.04	HAKU.17022.02	HAKU.17043.01	HAKU.17043.03	HAKU.17575.01	HAKU.19356.04	HAKU.19356.05	HAKU.21309.01	HAKU.22968.02	HAKU.22968.06	HAKU.24962.03
Capnocytophaga sp._HMT_901 (SP1)	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0
Prevotella micans (SP101)	0	3	12	1	1	12	20	5	0	0	5	24	1	5	7	2	8	6
Schaalia lingnae (SP114)	147	0	6	34	0	90	4	0	18	37	10	66	17	0	93	4	0	2
Treponema sp._HMT_257 (SP12)	0	13	97	1	1	0	6	4	74	0	3	15	0	0	275	0	0	3
Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122)	9	3	35	2	0	127	27	1	2	304	6	96	5	16	53	9	1	20
Oribacterium sp._HMT_078 (SP123)	0	4	9	1	1	119	12	0	1	13	1	2	0	0	70	7	92	0
Prevotella pleuritidis (SP125)	0	10	4	0	13	12	23	50	9	5	8	12	1	4	1	0	69	1
Butyrivibrio sp._HMT_455 (SP126)	7	0	0	2	0	116	0	0	0	2	0	11	5	0	0	3	0	0
Oribacterium sinus (SP127)	12	51	23	65	3	89	45	35	13	64	8	15	17	3	97	263	3	113
Lancefieldella sp._HMT_199 (SP129)	0	0	11	9	1	0	23	1	19	29	2	16	0	3	95	0	71	0
Selenomonas dianae (SP130)	0	0	111	3	11	0	11	0	1	4	2	6	5	5	4	0	0	5
Leptotrichia buccalis (SP132)	22	29	440	21	9	21	38	7	32	21	28	82	11	68	13	41	8	116
Cardiobacterium valvarum (SP137)	12	0	5	0	16	0	8	0	0	2	1	12	1	0	5	3	9	67
Fusobacterium periodonticum (SP138)	23	240	799	569	5	719	94	240	1082	3486	652	369	255	153	258	1793	10	596
Treponema denticola (SP148)	15	0	249	6	6	0	9	13	27	44	3	343	0	4	13	0	92	0
Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP151)	0	0	17	0	0	0	0	0	0	7	0	0	0	0	3	0	0	0
Peptidiphaga sp._HMT_183 (SP152)	1	0	0	2	1	5	23	0	5	6	0	0	119	0	7	1	0	0
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP157)	1	1	0	0	2	106	81	1	12	5	2	12	3	5	26	0	0	0
Romboutsia timonensis (SP158)	0	0	0	2	2	0	0	0	0	0	0	0	0	1	0	1	0	0
Prevotella veroralis (SP159)	2	25	62	19	10	1	57	14	22	15	0	217	4	5	1	8	103	0
Eikenella halliae (SP161)	17	22	9	136	59	37	207	4	10	3	11	7	37	22	88	18	3	48
Leptotrichia sp._HMT_217 (SP162)	0	0	11	0	0	0	0	0	0	0	3	85	0	0	0	0	0	4
Leptotrichia sp._HMT_212 (SP163)	23	131	19	55	5	23	49	21	41	26	8	48	6	19	101	61	3	181
Treponema socranskii (SP171)	1	0	229	0	2	15	5	1	5	18	13	122	7	3	14	0	225	4
Tannerella forsythia (SP172)	2	0	67	5	2	0	51	27	52	54	13	86	0	4	5	0	0	0
Prevotella oris (SP176)	11	12	244	15	58	46	63	43	35	4	43	319	60	73	94	24	1557	43
Bacteroidetes_[G-5] bacterium_HMT_505 (SP177)	8	0	16	0	7	0	11	0	62	0	17	6	0	0	0	0	90	0
Granulicatella elegans (SP185)	2117	2680	663	1004	730	272	721	2186	1906	27	2210	1310	1446	819	820	995	229	1776
Tannerella serpentiformis (SP188)	1	0	4	7	5	24	19	1	1	15	4	0	1	1	3	27	4	6
Leptotrichia sp._HMT_392 (SP193)	12	41	41	39	1	40	63	9	12	51	6	47	6	41	5	17	1	76
Prevotella melaninogenica (SP194)	296	171	202	207	33	583	59	70	481	230	453	168	382	61	114	435	8	256
Prevotella histicola (SP195)	678	17	104	1009	20	13	20	12	259	102	199	7	777	29	60	437	88	24
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP201)	0	0	30	0	0	0	0	0	51	114	1	1	0	0	16	0	0	0
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP202)	8	68	187	80	15	39	12	8	28	31	24	17	1	59	43	27	26	31
Centipeda periodontii (SP203)	2	4	15	0	3	8	33	0	1	8	5	2	0	0	3	0	1	5
Aggregatibacter actinomycetemcomitans (SP204)	23	0	0	0	95	338	143	0	31	0	9	0	0	32	0	0	0	0
Treponema sp._HMT_246 (SP205)	1	3	215	0	0	0	57	0	10	11	16	0	0	0	0	0	0	1
Prevotella denticola (SP208)	0	0	76	19	10	9	53	9	34	53	33	440	6	2	10	5	5443	11
Alloprevotella tannerae (SP209)	18	13	139	18	13	71	27	10	12	38	62	8	5	40	22	0	1819	39
Eikenella corrodens (SP210)	2	7	12	0	6	14	33	13	2	64	2	12	3	9	151	2	5	16
Capnocytophaga sputigena (SP216)	17	146	4	29	46	31	140	17	16	1	9	5	45	17	23	36	1	72
Weeksellaceae_[G-1] sp._HMT_907 (SP217)	2	12	8	2	5	0	23	3	1	0	0	0	0	1	8	0	0	9
Streptococcus sanguinis (SP22)	281	954	614	97	583	434	709	520	357	93	73	15	308	184	649	109	155	1087
Treponema sp._HMT_256 (SP235)	0	0	100	0	0	0	2	0	7	8	4	0	0	0	0	0	1	0
Prevotella fusca (SP236)	84	0	14	0	1	0	6	8	7	1	3	119	0	4	0	0	9	0
Alloprevotella sp._HMT_912 (SP238)	8	12	43	2	7	0	17	1	4	28	3	4	1	4	3	0	35	3
Prevotella shahii (SP239)	2	0	3	0	2	12	2	1	10	18	6	198	0	0	1	18	2	5
Prevotella sp._HMT_309 (SP240)	41	0	1	44	4	0	1	0	4	9	3	0	26	0	3	12	4	0
Treponema amylovorum (SP26)	12	0	14	0	12	0	34	0	8	12	0	9	0	87	0	0	303	0
Veillonella dispar (SP268)	34	668	127	217	170	77	204	145	154	101	165	19	571	12	872	444	105	55
Streptococcus mutans (SP270)	1	0	54	39	8	95	41	5	2	0	0	0	872	2	0	0	10	0
Streptococcus anginosus (SP272)	14	0	846	35	2	13	188	0	65	31	0	164	3	9	66	3	17	0
Prevotella sp._HMT_942 (SP273)	14	0	100	15	3	0	0	1	2	1	108	0	0	52	0	21	0	41
Prevotella sp._HMT_317 (SP274)	10	13	16	4	53	9	43	1	22	14	15	17	10	5	9	2	11	53
Bulleidia extructa (SP276)	19	0	2	0	0	0	15	0	0	7	0	1	0	0	53	0	0	0
Leptotrichia sp._HMT_215 (SP29)	9	8	58	299	1	576	317	20	197	472	229	117	27	77	479	84	0	127
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP3)	67	19	0	67	3	4	12	3	5	6	0	0	4	1	45	0	0	13
Haemophilus parahaemolyticus (SP30)	211	0	2	367	0	83	0	1	0	13	0	0	504	65	0	0	294	187
Campylobacter gracilis (SP300)	4	8	33	2	29	92	35	17	5	18	11	14	14	2	65	16	53	28
Prevotella salivae (SP301)	375	7	85	296	67	55	121	4	66	78	12	170	75	1	21	81	66	17
Shuttleworthia satelles (SP303)	0	0	23	8	2	3	15	2	9	7	1	10	0	1	12	0	87	0
Prevotella sp._HMT_443 (SP304)	5	0	214	3	0	0	19	0	9	66	6	373	0	4	46	0	0	0
Leptotrichia hofstadii (SP309)	1	147	46	45	27	55	60	7	28	9	21	15	10	4	2	5	49	154
Peptostreptococcaceae_[G-2] bacterium_HMT_091 (SP31)	0	0	6	0	0	2	0	0	1	29	0	0	0	1	23	0	0	1
Treponema sp._HMT_231 (SP312)	0	0	7	0	0	0	2	7	0	2	1	2	0	0	4	0	107	0
Cardiobacterium hominis (SP315)	7	50	2	51	30	39	76	17	4	6	1	16	32	4	1	11	1	58
Filifactor alocis (SP325)	37	0	120	0	3	0	57	7	62	241	7	51	0	4	127	0	0	0
Schaalia sp._HMT_172 (SP326)	303	0	7	125	0	549	30	10	106	201	76	13	30	27	183	33	0	17
Selenomonas noxia (SP329)	14	38	23	4	57	25	39	6	1	7	1	7	1	8	43	20	80	67
Fusobacterium sp._HMT_248 (SP330)	38	5	25	49	11	0	5	0	89	6	17	0	0	732	0	0	0	84
Prevotella koreensis (SP331)	1	0	21	0	0	0	13	0	12	1	5	240	0	3	0	0	0	0
Prevotella sp._HMT_472 (SP337)	0	17	1	2	4	9	0	3	24	0	1	0	0	3	17	0	0	0
Veillonellaceae_[G-1] bacterium_HMT_155 (SP34)	0	0	4	0	1	8	0	1	0	2	1	8	0	1	3	0	26	0
Campylobacter concisus (SP340)	45	109	13	19	64	192	106	12	32	23	26	9	44	10	22	323	18	52
Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP342)	0	0	0	0	0	0	1	3	0	1	0	9	0	0	2	0	123	0
Leptotrichia sp._HMT_909 (SP350)	2	0	67	1	0	0	3	0	3	3	20	15	0	8	1	2	0	7
Stomatobaculum longum (SP352)	248	17	16	68	1	159	176	0	7	46	48	16	19	0	55	15	128	2
Dialister invisus (SP354)	1	2	454	18	7	36	15	16	12	73	8	117	3	5	162	11	1586	3
Lachnospiraceae_[G-8] bacterium_HMT_500 (SP357)	0	0	35	0	0	0	4	0	24	49	1	26	0	1	7	0	8	0
Streptococcus hongkongensis (SP397)	17	0	13	29	3	9	5	1	28	12	11	0	99	3	2	0	1	45
Lautropia mirabilis (SP399)	69	1168	224	3	4149	725	267	192	146	130	56	2	39	15	763	51	140	602
Mogibacterium timidum (SP401)	0	0	17	0	0	0	0	0	2	13	0	2	0	3	43	0	0	0
Veillonella sp._HMT_780 (SP402)	381	252	462	113	75	9	86	4262	127	17	693	1	106	60	223	493	12	365
Bacteroidetes_[G-5] bacterium_HMT_507 (SP403)	0	0	123	0	0	0	64	0	6	17	8	0	0	0	0	0	0	0
Peptidiphaga gingivicola (SP409)	1	3	7	31	9	15	4	1	2	7	3	0	28	3	8	7	1	5
Alloprevotella sp._HMT_308 (SP411)	40	4	32	15	5	12	4	2	2	4	20	1	14	1	4	230	3	2
Mitsuokella sp._HMT_521 (SP415)	1	11	1	0	5	4	0	1	2	1	3	0	0	1	0	0	7	0
Butyrivibrio sp._HMT_080 (SP417)	41	0	19	1	0	0	11	1	0	11	6	4	0	0	13	0	4	0
Cryptobacterium curtum (SP423)	0	0	8	4	0	0	0	0	0	1	0	0	0	0	0	0	211	0
Johnsonella sp._HMT_166 (SP424)	0	0	12	4	0	0	0	0	7	7	0	46	0	0	4	0	0	0
Prevotella saccharolytica (SP429)	1	0	15	0	4	3	5	0	2	1	3	10	2	0	2	0	3	11
Bacteroidetes_[G-3] bacterium_HMT_280 (SP430)	0	0	11	0	0	0	5	0	7	19	0	24	0	0	6	0	0	0
Leptotrichia trevisanii (SP464)	1	8	3	1	6	15	6	5	5	2	2	6	6	2	0	5	21	11
Lachnoanaerobaculum orale (SP468)	119	44	129	166	6	294	104	1	35	99	40	13	28	2	135	33	125	9
Corynebacterium matruchotii (SP469)	31	41	26	15	132	95	3452	8	58	73	38	2	81	99	13	7	15	129
Scardovia wiggsiae (SP482)	0	0	2	2	3	3	0	1	9	2	0	74	4	0	0	0	9	2
Leptotrichia shahii (SP483)	23	124	8	174	92	31	301	7	29	8	169	11	74	36	24	29	74	832
Haemophilus parainfluenzae (SP484)	268	2769	849	4161	1329	2591	1106	3555	4282	2579	1101	159	1208	1229	1527	8092	264	3344
Weeksellaceae_[G-1] sp._HMT_931 (SP486)	29	14	1	0	1	10	3	289	0	1	2	20	1	0	0	13	0	0
Abiotrophia defectiva (SP487)	132	242	560	109	29	512	274	10	338	12	22	1	29	88	2197	54	5	227
Kingella sp._HMT_012 (SP488)	21	41	0	38	70	14	102	8	0	0	12	1	23	6	19	2	8	4
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP489)	40	0	5	50	0	112	0	1	30	66	5	0	4	2	43	62	1	5
Treponema lecithinolyticum (SP490)	0	0	5	0	1	0	11	22	1	1	1	26	0	4	36	0	64	0
Capnocytophaga granulosa (SP491)	5	23	9	20	38	37	729	4	6	3	4	3	8	20	11	37	11	32
Fusobacterium nucleatum (SP51)	21	133	227	76	36	155	219	66	156	208	97	60	64	84	81	93	208	99
Lancefieldella parvula (SP515)	263	0	99	128	1	384	19	4	31	151	21	83	29	0	363	83	3	13
Leptotrichia sp._HMT_218 (SP517)	169	0	147	14	7	59	37	1	17	158	585	10	106	0	0	29	3	53
Streptococcus intermedius (SP518)	6	18	24	5	2	133	59	0	4	2	20	4	64	8	30	0	8	9
Prevotella sp._HMT_300 (SP52)	0	2	4	1	7	0	0	2	1	2	11	1	0	1	0	9	40	5
Oribacterium parvum (SP521)	9	0	8	14	0	83	0	0	5	156	2	35	0	0	4	59	0	6
Prevotella nigrescens (SP527)	3	63	42	2	48	2	9	40	4	10	12	21	6	3	1	83	4914	3
Prevotella pallens (SP530)	250	8	115	134	5	108	54	7	108	54	25	296	42	0	22	104	0	16
Rothia aeria (SP532)	71	35	56	106	56	60	94	184	29	13	110	12	48	24	295	48	27	78
Leptotrichia sp._HMT_847 (SP538)	0	0	5	3	16	44	5	13	17	6	2	38	17	1	1	5	159	0
Corynebacterium durum (SP55)	27	186	19	46	28	18	234	81	17	27	19	1	10	12	241	19	14	10
Leptotrichia wadei (SP550)	3	50	50	83	8	21	217	4	15	11	22	4	17	2	31	32	69	37
Prevotella intermedia (SP551)	47	0	163	0	28	0	12	0	38	38	15	315	0	73	115	0	0	0
Porphyromonas gingivalis (SP553)	6	0	256	3	0	2	0	0	384	104	7	0	0	0	46	0	0	0
Kingella oralis (SP564)	10	30	17	87	114	9	249	10	6	1	23	3	72	11	170	5	18	74
Prevotella oulorum (SP567)	12	28	50	13	62	4	34	2	6	5	7	13	38	1	1	44	89	9
Neisseria sp._HMT_018 (SP568)	0	3	0	113	26	13	4	0	0	0	0	1	2	7	0	16	23	1
Pseudoleptotrichia goodfellowii (SP569)	0	4	0	8	6	122	7	3	6	1	3	21	11	0	9	6	19	2
Fusobacterium nucleatum_subsp._vincentii (SP585)	22	27	127	30	55	152	298	96	240	42	65	164	22	52	155	0	74	7
Prevotella aurantiaca (SP588)	0	0	2	0	3	0	1	4	1	16	0	116	0	1	4	25	0	4
Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP589)	0	0	4	0	0	0	11	0	3	37	0	11	0	1	7	0	0	0
Prevotella jejuni (SP60)	1206	0	454	191	17	131	33	25	259	133	163	148	409	28	87	1252	33	19
Leptotrichia sp._HMT_225 (SP609)	20	0	92	37	9	103	12	12	59	33	31	203	2	190	18	39	0	163
Leptotrichia sp._HMT_417 (SP61)	558	70	375	404	36	258	360	19	102	252	870	140	122	28	49	48	37	207
Stomatobaculum sp._HMT_097 (SP610)	3	0	16	104	0	204	0	8	92	304	1	42	3	13	136	68	0	39
Prevotella baroniae (SP614)	0	0	58	2	4	0	16	0	23	18	0	42	8	9	11	0	0	0
Fannyhessea sp._HMT_416 (SP615)	0	0	0	0	0	2	0	0	0	10	0	0	0	0	0	0	590	0
Neisseria oralis (SP62)	91	121	47	29	1613	382	173	1678	107	71	94	255	183	110	45	388	495	1776
Bacteroidetes_[G-5] bacterium_HMT_511 (SP629)	3	13	38	0	4	0	0	28	1	0	4	41	12	7	3	0	0	0
Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP63)	2	0	45	2	0	0	45	0	34	199	0	47	0	0	47	0	0	0
Fretibacterium sp._HMT_360 (SP637)	0	0	10	0	0	0	9	0	5	1	0	61	0	0	0	0	0	0
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP643)	156	0	30	22	3	42	4	10	9	25	13	2	2	0	42	3	11	5
Desulfobulbus sp._HMT_041 (SP645)	0	0	1	0	3	0	0	0	4	8	2	58	0	1	2	0	0	0
Fretibacterium fastidiosum (SP649)	0	0	22	0	0	0	3	1	2	5	1	67	0	3	4	0	5	0
Pseudoleptotrichia sp._HMT_221 (SP650)	199	26	4	173	32	190	252	11	138	192	623	174	149	10	16	34	28	34
Pseudoleptotrichia sp._HMT_219 (SP651)	2	7	0	14	7	5	22	17	0	0	0	35	9	4	17	17	1	7
Capnocytophaga leadbetteri (SP652)	8	23	12	35	25	81	103	3	4	6	9	6	21	18	23	45	7	35
Prevotella multiformis (SP660)	0	0	259	3	5	0	70	0	92	34	13	1	8	11	2	3	1	0
Prevotella nanceiensis (SP661)	31	35	8	315	3	9	3	10	97	7	15	424	119	49	24	963	0	36
Rothia dentocariosa (SP662)	58	294	282	408	89	105	240	644	189	8	122	16	70	5	448	8	167	49
Parvimonas micra (SP663)	21	6	10	1	2	140	75	0	6	64	0	25	0	7	623	0	71	5
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP664)	0	0	0	0	0	0	0	0	9	19	0	0	0	0	2	0	0	3
Solobacterium moorei (SP674)	78	3	33	81	0	379	12	2	32	281	13	27	3	1	132	68	137	7
Prevotella multisaccharivorax (SP676)	0	0	0	20	5	1	18	0	0	62	0	0	0	0	0	0	2742	0
Ottowia sp._HMT_894 (SP682)	0	0	2	0	0	0	4	0	0	0	0	0	4	2	0	9	0	0
Prevotella maculosa (SP683)	6	10	30	1	16	13	10	1	2	3	4	9	11	5	4	4	16	6
Campylobacter sp._HMT_044 (SP684)	96	0	4	0	0	0	127	0	0	45	5	1	0	0	14	1	0	2
Treponema sp._HMT_238 (SP687)	0	0	0	1	0	0	23	0	49	15	0	165	0	0	0	0	0	0
Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP688)	0	0	25	0	0	2	1	0	2	16	4	5	1	4	50	1	31	2
Anaeroglobus geminatus (SP691)	0	0	294	0	0	18	0	6	1	35	59	47	1	0	3	1	2934	2
Lachnospiraceae_[G-2] bacterium_HMT_088 (SP694)	14	0	0	0	0	0	3	1	0	0	0	91	0	7	0	1	0	48
Bacteroidales_[G-2] bacterium_HMT_274 (SP696)	3	0	124	2	7	144	32	46	9	12	17	139	0	2	16	0	0	7
Actinomyces graevenitzii (SP701)	863	2	17	98	0	554	41	1	73	226	86	81	38	8	198	17	0	4
Oribacterium asaccharolyticum (SP702)	55	3	4	44	0	148	13	2	8	19	8	1	2	0	29	68	0	9
Limosilactobacillus mucosae (SP709)	0	1	0	5	1	0	6	0	0	6	0	0	0	0	0	0	553	0
Selenomonas flueggei (SP718)	0	4	1	0	1	12	11	0	0	1	1	0	0	0	0	2	1	0
Treponema sp._HMT_262 (SP72)	0	7	115	0	0	0	2	0	117	0	1	38	0	0	0	0	0	1
Alloprevotella sp._HMT_473 (SP725)	900	221	331	126	60	7	273	56	79	12	1448	1210	2	546	86	911	3	822
Mycoplasma faucium (SP728)	10	0	0	0	2	3	14	0	36	8	2	11	0	2	6	0	0	0
Rothia mucilaginosa (SP73)	912	551	417	5901	536	1445	567	258	1534	1273	2878	45	4771	65	342	2050	39	1852
Pseudoramibacter alactolyticus (SP731)	0	0	11	0	0	0	0	0	3	2	0	9	1	0	4	0	24	0
Leptotrichia hongkongensis (SP739)	28	415	42	127	44	46	580	23	38	2	59	18	145	31	21	35	376	53
Dialister pneumosintes (SP757)	19	0	69	1	0	17	64	0	7	23	3	0	0	3	83	0	536	3
Streptobacillus felis (SP758)	0	0	4	0	0	0	0	0	257	13	1	17	0	0	0	0	0	0
Lachnoanaerobaculum saburreum (SP76)	6	45	4	11	7	55	125	0	3	8	0	2	8	0	13	5	8	26
Lancefieldella rimae (SP771)	0	0	164	10	1	7	15	1	1	12	1	62	1	1	43	0	42	6
Oribacterium sp._HMT_102 (SP773)	0	0	17	1	0	0	0	0	0	18	0	1	0	1	18	0	0	0
Granulicatella adiacens (SP776)	972	854	241	1536	77	993	716	169	921	471	283	490	211	54	1252	793	41	483
Prevotella sp._HMT_304 (SP779)	0	0	204	0	4	0	0	0	66	98	0	66	0	11	18	0	0	0
Treponema sp._HMT_951 (SP780)	2	0	112	0	0	0	0	8	3	2	0	0	0	0	3	0	0	0
Capnocytophaga sp._HMT_332 (SP787)	3	27	2	3	9	15	22	0	1	0	3	0	3	0	7	3	0	24
Porphyromonas sp._HMT_930 (SP8)	508	286	3	86	1026	4	81	2176	32	2	889	2036	322	43	2	87	0	416
Veillonella sp._HMT_917 (SP803)	99	3	0	0	6	11	1	0	1	0	36	0	85	0	12	12	3	0
Cloacibacterium sp._HMT_206 (SP809)	3	6	0	0	263	0	101	0	59	0	42	0	0	0	0	1	444	67
Pseudostreptobacillus hongkongensis (SP819)	54	0	2	4	7	1	0	1	0	0	1	0	0	7	0	1	0	0
Phocaeicola abscessus (SP820)	0	0	53	0	0	0	0	0	4	2	2	78	0	0	11	0	0	0
Peptostreptococcus stomatis (SP833)	56	2	533	76	0	106	78	0	71	326	10	91	3	24	697	151	0	5
Alloprevotella sp._HMT_914 (SP836)	2	0	56	16	1	2	1	2	12	10	36	0	2	8	4	0	0	8
Catonella morbi (SP84)	4	7	6	6	0	80	3	4	5	18	3	17	3	0	32	67	0	6
Megasphaera micronuciformis (SP851)	314	3	26	71	1	88	8	10	22	208	17	58	24	0	139	80	6	0
Lachnospiraceae_[G-2] bacterium_HMT_096 (SP852)	249	0	20	20	6	228	21	1	28	268	51	2	49	11	39	0	0	92
Capnocytophaga gingivalis (SP860)	17	39	1	0	8	34	41	3	4	24	10	0	13	8	18	18	0	8
Alloprevotella rava (SP870)	319	0	54	30	3	13	3	7	28	43	10	208	47	12	9	4	384	6
Riemerella sp._HMT_322 (SP876)	10	134	14	9	9	83	46	53	32	10	19	1	5	1	16	96	0	103
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP89)	0	13	2	2	0	0	8	2	1	40	2	4	0	0	27	0	1	1
Leptotrichia sp._HMT_498 (SP91)	3	84	120	99	56	30	93	6	16	22	79	53	25	19	5	1	22	465
Prevotella sp._HMT_396 (SP96)	0	1	23	0	0	1	0	0	9	4	1	20	1	0	1	18	0	2
Prevotella sp._HMT_305 (SP99)	31	0	0	10	0	5	0	0	0	0	1	0	10	0	1	0	0	0
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP10)	7510	12245	8044	7635	8102	6194	10059	13310	11673	2462	6628	17455	8301	5163	9054	9392	2393	11128
Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP100)	22	79	48	34	100	1908	251	116	12	13	27	121	45	33	165	2	95	32
Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP101)	6	0	24	8	9	12	61	15	36	44	27	5	11	18	27	23	4	47
Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP102)	2	27	98	9	26	10	49	83	13	24	17	14	13	10	21	8	91	41
Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP103)	23	165	60	44	210	112	491	127	52	105	126	100	89	59	143	164	30	374
Treponema medium_sp._HMT_237 (SPP105)	1	0	13	0	2	0	3	3	4	8	1	220	0	0	9	0	16	1
Fusobacterium nucleatum_subsp._animalis_simiae (SPP106)	11	0	80	5	11	19	33	13	10	49	5	2	16	15	13	3	458	14
Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP107)	345	6855	1219	1300	4628	1681	3655	2249	711	75	150	212	495	361	2670	667	313	2300
Kingella_Neisseria denitrificans_elongata (SPP110)	6	263	54	507	187	228	872	6	34	100	19	76	90	57	1057	58	28	72
Peptoanaerobacter_Peptostreptococcaceae_[G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP112)	1	0	2	0	6	0	19	1	0	7	0	26	4	9	1	0	26	16
Prevotella scopos_sp._HMT_314 (SPP114)	0	0	25	10	33	2	14	10	88	13	69	4	105	9	1	39	0	0
Prevotella jejuni_scopos_sp._HMT_314 (SPP115)	7	14	27	9	8	3	4	0	26	40	77	6	11	2	2	52	1	2
Fusobacterium hwasookii_sp._HMT_370 (SPP118)	409	19	186	47	20	79	253	20	113	187	71	103	26	233	121	58	24	383
Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP119)	1811	629	348	1596	3090	598	871	2962	755	172	1468	422	487	580	444	78	31	801
Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP12)	370	113	30	0	42	1	6	1690	40	2	24	1	463	398	0	172	3	94
Mogibacterium diversum_neglectum_pumilum_vescum (SPP120)	67	0	82	58	0	317	21	0	20	204	10	1	11	6	153	8	15	7
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP121)	5	14	12	11	10	5	11	9	11	12	6	8	4	13	9	15	9	7
Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP124)	85	168	60	135	79	109	656	9	47	23	44	4	89	18	1754	6	17	165
Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP125)	1	0	0	7	28	15	85	4	1	12	4	1	22	6	26	1	11	4
Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP127)	0	1	367	2	0	332	18	0	23	504	9	20	0	2	3	3	0	39
Porphyromonas pasteri_sp._HMT_278 (SPP13)	47	792	80	557	51	58	194	184	978	131	109	54	183	516	20	1858	13	439
Porphyromonas endodontalis_sp._HMT_285 (SPP130)	1	0	312	4	12	0	419	39	347	533	14	218	0	11	166	0	0	1
Treponema maltophilum_sp._HMT_260 (SPP131)	0	0	14	1	2	0	3	0	2	4	0	43	0	0	3	0	0	0
Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP132)	35	2	71	0	37	85	1	23	437	3711	163	0	38	34	21	125	0	336
Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP133)	32	255	718	1041	349	206	557	81	573	1931	77	166	114	1059	287	405	62	132
Moraxella bovoculi_equi_lacunata_sp._HMT_276 (SPP14)	0	0	0	0	0	0	0	0	0	0	0	8	0	14	0	0	0	0
Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP143)	28	0	6	9	4	55	28	1	2	18	8	7	15	0	13	2	42	1
Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP146)	0	0	33	0	0	0	4	0	5	27	0	130	0	0	6	0	0	0
Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP15)	1	58	0	0	11	4	1	20	9	0	3	6	25	9	0	0	0	132
Catonella morbi_sp._HMT_164 (SPP155)	0	2	27	0	0	1	36	0	15	4	1	32	1	3	8	1	4	2
Schaalia odontolytica_sp._HMT_180 (SPP158)	159	7	16	161	1	466	102	4	42	323	26	2	21	8	854	40	1	23
Lachnoanaerobaculum gingivalis_umeaense (SPP160)	2	69	102	61	3	241	81	4	46	189	28	178	10	15	256	45	3	87
Campylobacter rectus_showae (SPP163)	19	10	175	15	19	25	112	44	93	50	18	228	8	10	38	4	39	37
Prevotella jejuni_veroralis (SPP19)	18	0	30	27	4	1	13	0	51	27	29	1	61	5	1	13	3	0
Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP2)	7	3	198	6	10	11	45	4	0	16	24	31	9	15	18	1	21	13
Eikenella_Neisseria canis_halliae (SPP20)	12	32	1	20	6	8	23	2	4	0	1	0	0	23	4	2	0	5
Eikenella_Kingella halliae_sp._HMT_012 (SPP21)	0	4	5	61	19	1	93	1	1	2	0	0	10	12	73	2	0	8
Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 (SPP22)	0	0	0	0	0	0	0	0	58	47	0	15	0	0	0	0	0	0
Leptotrichia sp._HMT_215_sp._HMT_217 (SPP23)	0	0	2	6	0	1	6	1	10	12	1	0	0	0	7	0	0	4
Veillonella parvula_rogosae_tobetsuensis (SPP24)	23	120	63	270	57	371	43	266	106	779	140	98	187	43	561	857	138	332
Kingella sp._HMT_459_sp._HMT_932 (SPP27)	0	3	0	0	0	30	4	4	2	0	2	0	3	1	0	73	17	19
Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP3)	4	1	21	0	0	0	4	1	0	1	1	7	0	0	5	0	11	0
Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP30)	0	0	6	1	8	0	0	3	0	3	9	12	4	0	1	30	227	1
Tannerella sp._HMT_286_sp._HMT_808 (SPP33)	7	15	46	0	12	70	102	8	17	24	12	111	3	12	19	2	15	46
Prevotella histicola_melaninogenica (SPP34)	7	0	15	134	5	0	11	5	40	37	62	2	82	3	4	52	5	9
Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(6 species) (SPP35)	0	0	0	0	0	0	0	0	26	4	0	6	0	0	1	0	0	0
Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_314 (SPP36)	1	1	173	20	6	0	22	1	94	22	12	24	84	24	27	35	3	42
Prevotella melaninogenica_scopos_sp._HMT_314 (SPP37)	7	183	1278	149	42	67	239	28	562	81	93	672	991	216	532	178	18	157
Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_314_ve ...(6 species) (SPP38)	5	0	5	45	1	0	4	1	21	28	41	0	42	0	0	12	1	0
Hallella_Prevotella dentalis_seregens (SPP39)	0	0	52	0	2	0	5	6	18	1	3	22	0	0	0	0	0	0
Lactobacillus delbrueckii_equicursoris_leichmannii (SPP4)	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	578	0
Selenomonas sp._HMT_442_sputigena (SPP41)	9	8	480	8	1	9	81	3	19	38	28	48	8	15	46	0	37	25
Prevotella sp._HMT_306_vespertina (SPP46)	1050	0	26	271	15	52	22	8	101	123	98	5	111	2	4	58	33	5
Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP5)	2046	1772	1458	2309	545	5575	5068	2196	4994	1787	2592	1011	5101	2806	2385	763	130	4937
Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP50)	120	7	251	410	86	24	344	45	513	411	161	12	292	158	589	55	11	266
Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP51)	3526	104	77	665	58	703	136	36	876	1515	393	86	614	32	896	96	9	505
Streptococcus lactarius_peroris_sp._HMT_074 (SPP52)	1	0	7	76	10	0	23	5	23	9	41	0	43	6	7	10	0	28
Alloprevotella sp._HMT_912_sp._HMT_913 (SPP54)	10	17	12	9	4	3	10	4	0	6	5	1	0	56	27	0	17	4
Prevotella shahii_sp._HMT_317 (SPP55)	2	19	0	0	14	0	7	0	4	11	13	93	15	0	3	1	37	27
Bifidobacterium dentium_moukalabense (SPP57)	0	0	595	15	0	10	95	0	0	9	0	0	0	0	31	0	2886	0
Veillonella atypica_dispar (SPP59)	1460	296	106	1306	106	692	212	174	313	328	778	17	581	20	691	413	80	76
Streptococcus anginosus_constellatus (SPP60)	16	0	99	8	1	38	91	0	55	10	13	21	3	7	79	2	14	5
Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP64)	33	0	24	14	152	1	6	1013	150	1	129	0	54	194	1	114	11	653
Streptococcus dentirousetti_downei_sobrinus (SPP65)	0	1	0	0	3	16	3	1	2	12	0	1	73	0	0	5	3	11
Kocuria assamensis_palustris (SPP66)	1	0	0	0	660	0	1	0	0	0	0	0	29	0	0	0	0	2
Prevotella loescheii_sp._HMT_472 (SPP68)	10	1	12	0	12	3	23	2	1	1	2	3	5	5	0	18	1	55
Centipeda_Selenomonas dianae_noxia_periodontii (SPP7)	1	8	29	1	1	2	14	0	0	0	0	8	1	0	0	0	6	0
Peptoanaerobacter_Peptostreptococcaceae_[G-7] bacterium_HMT_081_stomatis (SPP72)	0	0	6	0	0	0	0	0	1	25	0	16	1	2	18	0	0	1
Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP76)	7	1	59	0	0	0	7	0	5	2	0	21	0	0	2	0	0	1
Aggregatibacter aphrophilus_paraphrophilus (SPP78)	25	0	4	0	161	0	0	0	65	8	8	2	34	65	2	133	0	23
Leptotrichia buccalis_sp._HMT_225 (SPP8)	0	0	793	15	4	16	19	3	19	5	16	2	5	38	0	12	7	47
Streptococcus salivarius_thermophilus_vestibularis (SPP80)	4024	29	1051	706	103	1179	334	65	743	280	432	51	2780	120	66	75	6	1532
Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP81)	139	2	277	191	51	31	94	20	239	35	131	2	811	73	11	32	0	432
Lautropia dentalis_mirabilis (SPP82)	120	8	27	8	1537	200	37	188	46	4	1	2	19	9	75	51	79	213
Neisseria cinerea_flavescens_perflava_subflava (SPP87)	140	764	1028	2358	422	1178	1594	173	2384	4802	3883	6043	656	3741	1526	1984	116	2042
Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP89)	236	34	1204	1035	375	210	1267	217	996	735	522	52	1645	570	2222	138	84	1059
Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP9)	321	381	826	474	121	339	858	78	650	2164	196	21	411	176	1814	49	97	429
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP96)	0	45	2	0	18	8	5	1	5	21	6	0	3	9	0	6	5	7
Peptococcus sp._HMT_167_sp._HMT_168 (SPP97)	2	0	19	1	2	1	4	3	9	32	1	72	0	1	0	0	31	2
Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP99)	29	41	198	21	23	694	111	98	35	47	49	136	74	37	36	85	2779	46