Taxon	HAKU.02057.01	HAKU.06641.01	HAKU.06912.03	HAKU.07031.01	HAKU.07991.04	HAKU.12368.03	HAKU.13051.01	HAKU.13110.01	HAKU.14257.06	HAKU.15133.05	HAKU.16255.02	HAKU.17022.02	HAKU.17043.03	HAKU.17164.01	HAKU.17164.06	HAKU.19122.01	HAKU.19356.04	HAKU.21294.01	HAKU.22968.06	HAKU.24962.03	HAKU.25705.02
Capnocytophaga sp._HMT_901 (SP1)	8	0	0	493	0	0	0	0	1	0	0	0	0	0	0	30	0	0	0	0	1
Prevotella micans (SP101)	0	0	4	186	0	3	1	0	1	20	54	0	5	0	0	12	1	3	8	6	0
Schaalia lingnae (SP114)	5	298	6	25	147	0	116	162	0	4	29	18	10	53	95	12	17	62	0	2	8
Treponema sp._HMT_257 (SP12)	0	1	0	0	0	13	0	0	1	6	44	74	3	3	0	119	0	0	0	3	0
Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122)	53	23	0	566	9	3	1	5	0	27	54	2	6	0	34	43	5	88	1	20	0
Oribacterium sp._HMT_078 (SP123)	208	1	5	105	0	4	20	5	1	12	15	1	1	10	217	55	0	128	92	0	9
Prevotella pleuritidis (SP125)	52	0	348	2	0	10	40	1	13	23	317	9	8	2	0	94	1	1	69	1	2
Butyrivibrio sp._HMT_455 (SP126)	14	33	0	32	7	0	165	11	0	0	4	0	0	0	104	51	5	8	0	0	0
Oribacterium sinus (SP127)	108	70	194	35	12	51	33	149	3	45	132	13	8	287	3069	71	17	887	3	113	1
Lancefieldella sp._HMT_199 (SP129)	21	14	9	78	0	0	12	8	1	23	7	19	2	47	480	251	0	148	71	0	75
Selenomonas dianae (SP130)	0	0	2	494	0	0	2	0	11	11	24	1	2	0	0	3	5	27	0	5	1
Leptotrichia buccalis (SP132)	3	5	0	501	22	29	3	4	9	38	52	32	28	6	5	111	11	12	8	116	24
Cardiobacterium valvarum (SP137)	0	4	13	36	12	0	0	0	16	8	16	0	1	5	1	12	1	101	9	67	4
Fusobacterium periodonticum (SP138)	398	1709	664	3257	23	240	568	756	5	94	947	1082	652	774	217	736	255	175	10	596	29
Treponema denticola (SP148)	25	3	40	27	15	0	146	0	6	9	18	27	3	53	0	280	0	60	92	0	153
Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP151)	0	0	0	0	0	0	21	0	0	0	0	0	0	0	0	0	0	83	0	0	10
Peptidiphaga sp._HMT_183 (SP152)	1	1	18	5	1	0	55	0	1	23	0	5	0	4	16	73	119	36	0	0	22
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP157)	42	8	61	216	1	1	140	2	2	81	21	12	2	20	287	307	3	168	0	0	147
Romboutsia timonensis (SP158)	11	21	6	17	0	0	10	24	2	0	10	0	0	6	9	9	0	4	0	0	3
Prevotella veroralis (SP159)	180	4	62	49	2	25	115	2	10	57	356	22	0	130	39	115	4	20	103	0	5
Eikenella halliae (SP161)	4	43	16	168	17	22	0	2	59	207	49	10	11	22	8	101	37	113	3	48	7
Leptotrichia sp._HMT_217 (SP162)	0	3	3	132	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	4	0
Leptotrichia sp._HMT_212 (SP163)	104	37	18	241	23	131	0	5	5	49	70	41	8	20	3	67	6	140	3	181	3
Treponema socranskii (SP171)	31	4	11	142	1	0	42	8	2	5	103	5	13	29	54	120	7	33	225	4	51
Tannerella forsythia (SP172)	0	10	9	0	2	0	55	0	2	51	7	52	13	61	9	129	0	42	0	0	249
Prevotella oris (SP176)	572	19	54	149	11	12	242	63	58	63	668	35	43	107	256	254	60	118	1557	43	142
Bacteroidetes_[G-5] bacterium_HMT_505 (SP177)	0	0	7	0	8	0	0	0	7	11	18	62	17	0	0	0	0	0	90	0	0
Granulicatella elegans (SP185)	3563	16	113	2338	2117	2680	3429	0	730	721	318	1906	2210	374	355	1452	1446	12	229	1776	1961
Tannerella serpentiformis (SP188)	33	5	0	54	1	0	0	0	5	19	50	1	4	0	2	1	1	3	4	6	1
Leptotrichia sp._HMT_392 (SP193)	113	14	0	1324	12	41	5	15	1	63	69	12	6	4	62	44	6	53	1	76	8
Prevotella melaninogenica (SP194)	224	1650	95	21	296	171	668	1536	33	59	4798	481	453	523	198	590	382	109	8	256	64
Prevotella histicola (SP195)	42	340	21	64	678	17	1344	2242	20	20	2003	259	199	686	432	119	777	18	88	24	75
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP201)	0	0	0	0	0	0	0	0	0	0	0	51	1	0	0	31	0	0	0	0	108
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP202)	68	14	6	493	8	68	12	11	15	12	21	28	24	15	29	39	1	131	26	31	14
Centipeda periodontii (SP203)	32	2	0	148	2	4	1	0	3	33	6	1	5	0	21	13	0	16	1	5	20
Aggregatibacter actinomycetemcomitans (SP204)	0	0	89	0	23	0	0	0	95	143	98	31	9	0	0	0	0	0	0	0	27
Treponema sp._HMT_246 (SP205)	35	0	0	0	1	3	0	0	0	57	3	10	16	0	0	0	0	0	0	1	0
Prevotella denticola (SP208)	498	2	12	36	0	0	64	46	10	53	185	34	33	49	205	186	6	39	5443	11	185
Alloprevotella tannerae (SP209)	0	33	232	107	18	13	207	0	13	27	302	12	62	27	304	392	5	82	1819	39	122
Eikenella corrodens (SP210)	8	6	4	159	2	7	5	5	6	33	58	2	2	2	9	15	3	111	5	16	8
Capnocytophaga sputigena (SP216)	14	35	21	10	17	146	0	6	46	140	18	16	9	10	16	35	45	10	1	72	31
Weeksellaceae_[G-1] sp._HMT_907 (SP217)	0	1	0	82	2	12	0	8	5	23	13	1	0	0	3	9	0	0	0	9	4
Streptococcus sanguinis (SP22)	1808	342	587	67	281	954	7	320	583	709	46	357	73	569	80	167	308	1018	155	1087	214
Treponema sp._HMT_256 (SP235)	0	0	0	0	0	0	0	0	0	2	0	7	4	13	0	0	0	0	1	0	0
Prevotella fusca (SP236)	26	0	0	0	84	0	0	0	1	6	17	7	3	0	9	10	0	0	9	0	0
Alloprevotella sp._HMT_912 (SP238)	8	0	0	20	8	12	0	0	7	17	49	4	3	1	0	0	1	0	35	3	1
Prevotella shahii (SP239)	13	128	3	0	2	0	0	0	2	2	2	10	6	0	0	49	0	0	2	5	1
Prevotella sp._HMT_309 (SP240)	2	2	1	0	41	0	94	0	4	1	39	4	3	20	0	12	26	0	4	0	0
Treponema amylovorum (SP26)	0	0	15	0	12	0	0	0	12	34	0	8	0	0	0	0	0	0	303	0	365
Veillonella dispar (SP268)	331	192	286	1376	34	668	28	144	170	204	960	154	165	230	61	544	571	291	105	55	710
Streptococcus mutans (SP270)	15	32	4	78	1	0	19	16	8	41	6	2	0	12	106	10	872	319	10	0	292
Streptococcus anginosus (SP272)	193	78	4	279	14	0	71	38	2	188	19	65	0	123	13	269	3	263	17	0	257
Prevotella sp._HMT_942 (SP273)	926	0	0	14	14	0	6	0	3	0	0	2	108	0	0	12	0	0	0	41	1
Prevotella sp._HMT_317 (SP274)	42	1	15	13	10	13	3	1	53	43	13	22	15	15	10	45	10	6	11	53	31
Bulleidia extructa (SP276)	0	0	3	0	19	0	193	0	0	15	0	0	0	6	112	54	0	0	0	0	67
Leptotrichia sp._HMT_215 (SP29)	428	979	62	711	9	8	259	120	1	317	186	197	229	151	305	272	27	411	0	127	80
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP3)	0	1	0	226	67	19	0	0	3	12	15	5	0	0	2	7	4	0	0	13	0
Haemophilus parahaemolyticus (SP30)	114	0	0	904	211	0	187	14	0	0	0	0	0	8	0	2	504	0	294	187	0
Campylobacter gracilis (SP300)	260	12	74	247	4	8	172	25	29	35	120	5	11	11	105	152	14	471	53	28	78
Prevotella salivae (SP301)	119	282	4	142	375	7	1110	268	67	121	1102	66	12	141	295	117	75	129	66	17	338
Shuttleworthia satelles (SP303)	63	1	4	8	0	0	73	5	2	15	19	9	1	49	128	54	0	44	87	0	28
Prevotella sp._HMT_443 (SP304)	0	2	0	20	5	0	25	0	0	19	1	9	6	9	1	25	0	0	0	0	291
Leptotrichia hofstadii (SP309)	359	16	0	31	1	147	47	58	27	60	30	28	21	72	55	61	10	119	49	154	42
Peptostreptococcaceae_[G-2] bacterium_HMT_091 (SP31)	12	12	6	23	0	0	16	0	0	0	2	1	0	1	40	16	0	3	0	1	28
Treponema sp._HMT_231 (SP312)	0	0	2	0	0	0	25	0	0	2	44	0	1	0	0	22	0	14	107	0	6
Cardiobacterium hominis (SP315)	0	12	3	33	7	50	0	11	30	76	39	4	1	6	5	61	32	56	1	58	2
Filifactor alocis (SP325)	3	1	37	0	37	0	222	0	3	57	55	62	7	70	0	737	0	232	0	0	700
Schaalia sp._HMT_172 (SP326)	128	885	246	37	303	0	495	944	0	30	54	106	76	166	271	626	30	1875	0	17	50
Selenomonas noxia (SP329)	6	5	2	68	14	38	9	9	57	39	37	1	1	0	134	51	1	584	80	67	19
Fusobacterium sp._HMT_248 (SP330)	848	0	0	308	38	5	18	0	11	5	0	89	17	0	0	27	0	0	0	84	0
Prevotella koreensis (SP331)	0	0	0	0	1	0	14	0	0	13	0	12	5	4	0	152	0	0	0	0	71
Clostridioides difficile (SP335)	16	16	5	13	0	0	10	24	0	0	15	0	0	5	8	10	0	7	0	0	1
Prevotella sp._HMT_472 (SP337)	0	3	5	29	0	17	0	9	4	0	6	24	1	0	0	16	0	0	0	0	14
Veillonellaceae_[G-1] bacterium_HMT_155 (SP34)	50	1	1	66	0	0	2	1	1	0	5	0	1	1	77	40	0	49	26	0	2
Campylobacter concisus (SP340)	70	83	138	48	45	109	275	160	64	106	165	32	26	108	340	216	44	178	18	52	57
Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP342)	0	0	4	21	0	0	2	0	0	1	1	0	0	1	74	16	0	2	123	0	0
Leptotrichia sp._HMT_909 (SP350)	3	0	0	2	2	0	2	0	0	3	1	3	20	0	3	105	0	17	0	7	0
Stomatobaculum longum (SP352)	455	148	3	85	248	17	483	128	1	176	185	7	48	103	671	46	19	334	128	2	37
Dialister invisus (SP354)	109	8	242	308	1	2	60	15	7	15	20	12	8	51	518	158	3	129	1586	3	77
Lachnospiraceae_[G-8] bacterium_HMT_500 (SP357)	0	1	6	2	0	0	21	0	0	4	1	24	1	12	0	199	0	0	8	0	43
Streptococcus hongkongensis (SP397)	6	67	0	5	17	0	17	108	3	5	14	28	11	165	32	24	99	10	1	45	13
Lautropia mirabilis (SP399)	2956	261	5088	33	69	1168	2	175	4149	267	44	146	56	605	6	164	39	145	140	602	67
Mogibacterium timidum (SP401)	0	0	1	0	0	0	33	0	0	0	2	2	0	1	0	117	0	21	0	0	56
Veillonella sp._HMT_780 (SP402)	2426	0	4	257	381	252	80	0	75	86	70	127	693	8	22	496	106	39	12	365	250
Bacteroidetes_[G-5] bacterium_HMT_507 (SP403)	0	0	0	0	0	0	0	0	0	64	0	6	8	0	0	0	0	0	0	0	0
Peptidiphaga gingivicola (SP409)	15	25	27	0	1	3	30	8	9	4	0	2	3	25	88	101	28	49	1	5	127
Alloprevotella sp._HMT_308 (SP411)	7	14	77	7	40	4	18	139	5	4	222	2	20	5	12	13	14	2	3	2	13
Mitsuokella sp._HMT_521 (SP415)	15	0	0	0	1	11	4	0	5	0	0	2	3	9	0	10	0	3	7	0	9
Butyrivibrio sp._HMT_080 (SP417)	0	0	7	6	41	0	10	0	0	11	0	0	6	23	0	18	0	30	4	0	63
Cryptobacterium curtum (SP423)	59	1	0	0	0	0	14	3	0	0	15	0	0	14	26	13	0	19	211	0	13
Johnsonella sp._HMT_166 (SP424)	0	0	8	0	0	0	19	0	0	0	0	7	0	9	0	100	0	0	0	0	14
Prevotella saccharolytica (SP429)	4	0	4	20	1	0	0	0	4	5	16	2	3	1	6	10	2	6	3	11	3
Bacteroidetes_[G-3] bacterium_HMT_280 (SP430)	0	0	0	0	0	0	19	0	0	5	5	7	0	1	16	65	0	4	0	0	0
Leptotrichia trevisanii (SP464)	322	2	11	37	1	8	0	2	6	6	0	5	2	0	5	1	6	56	21	11	14
Lachnoanaerobaculum orale (SP468)	151	396	23	30	119	44	779	359	6	104	53	35	40	261	466	110	28	232	125	9	74
Corynebacterium matruchotii (SP469)	148	39	34	50	31	41	13	158	132	3452	18	58	38	38	43	229	81	24	15	129	298
Scardovia wiggsiae (SP482)	11	13	2	0	0	0	5	40	3	0	0	9	0	8	9	5	4	5	9	2	8
Leptotrichia shahii (SP483)	253	2	0	1391	23	124	4	15	92	301	165	29	169	26	91	325	74	228	74	832	105
Haemophilus parainfluenzae (SP484)	525	7128	1994	2542	268	2769	2036	7164	1329	1106	1775	4282	1101	2250	640	1304	1208	1933	264	3344	785
Weeksellaceae_[G-1] sp._HMT_931 (SP486)	31	0	14	1	29	14	10	0	1	3	9	0	2	0	11	8	1	0	0	0	4
Abiotrophia defectiva (SP487)	63	361	20	60	132	242	0	226	29	274	34	338	22	237	0	42	29	26	5	227	122
Kingella sp._HMT_012 (SP488)	0	7	0	1	21	41	0	0	70	102	2	0	12	3	0	6	23	0	8	4	0
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP489)	11	274	6	65	40	0	341	121	0	0	41	30	5	104	67	42	4	78	1	5	0
Treponema lecithinolyticum (SP490)	0	0	51	1	0	0	144	0	1	11	22	1	1	33	0	123	0	0	64	0	85
Capnocytophaga granulosa (SP491)	3	35	1	249	5	23	2	12	38	729	46	6	4	17	20	144	8	60	11	32	23
Fusobacterium nucleatum (SP51)	301	54	38	638	21	133	93	63	36	219	300	156	97	61	55	243	64	221	208	99	251
Lancefieldella parvula (SP515)	134	1143	28	170	263	0	825	919	1	19	305	31	21	271	474	96	29	281	3	13	70
Leptotrichia sp._HMT_218 (SP517)	407	220	0	8	169	0	547	51	7	37	40	17	585	125	0	68	106	96	3	53	85
Streptococcus intermedius (SP518)	141	39	28	92	6	18	35	0	2	59	4	4	20	8	61	31	64	2	8	9	124
Prevotella sp._HMT_300 (SP52)	10	1	28	0	0	2	2	6	7	0	43	1	11	1	9	29	0	0	40	5	0
Oribacterium parvum (SP521)	1	235	0	12	9	0	44	17	0	0	37	5	2	0	1	37	0	22	0	6	0
Prevotella nigrescens (SP527)	233	1	242	7	3	63	40	3	48	9	235	4	12	5	86	108	6	19	4914	3	48
Prevotella pallens (SP530)	178	189	1	183	250	8	1309	51	5	54	222	108	25	149	115	233	42	47	0	16	185
Rothia aeria (SP532)	147	71	328	53	71	35	2	409	56	94	3	29	110	195	0	217	48	148	27	78	125
Leptotrichia sp._HMT_847 (SP538)	59	4	11	0	0	0	6	5	16	5	0	17	2	7	22	29	17	4	159	0	0
Corynebacterium durum (SP55)	144	225	13	14	27	186	0	128	28	234	9	17	19	9	4	22	10	122	14	10	40
Leptotrichia wadei (SP550)	260	4	4	54	3	50	57	137	8	217	154	15	22	21	612	120	17	47	69	37	151
Prevotella intermedia (SP551)	0	0	269	0	47	0	1	0	28	12	665	38	15	17	0	453	0	0	0	0	64
Porphyromonas gingivalis (SP553)	0	0	0	2	6	0	397	0	0	0	0	384	7	64	0	992	0	112	0	0	705
Kingella oralis (SP564)	3	7	28	4	10	30	2	32	114	249	6	6	23	8	38	40	72	157	18	74	42
Prevotella oulorum (SP567)	76	24	18	59	12	28	24	9	62	34	100	6	7	17	92	48	38	47	89	9	101
Neisseria sp._HMT_018 (SP568)	0	17	4	0	0	3	0	31	26	4	0	0	0	0	3	0	2	0	23	1	0
Pseudoleptotrichia goodfellowii (SP569)	309	5	30	17	0	4	0	3	6	7	50	6	3	4	19	2	11	163	19	2	21
Fusobacterium nucleatum_subsp._vincentii (SP585)	21	33	222	148	22	27	291	9	55	298	1360	240	65	75	264	2074	22	343	74	7	1837
Prevotella aurantiaca (SP588)	0	135	16	0	0	0	1	12	3	1	247	1	0	130	55	0	0	0	0	4	0
Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP589)	0	0	0	18	0	0	6	0	0	11	0	3	0	0	0	97	0	5	0	0	35
Prevotella jejuni (SP60)	68	91	28	171	1206	0	746	1527	17	33	2355	259	163	43	395	434	409	7	33	19	108
Leptotrichia sp._HMT_225 (SP609)	102	1	6	102	20	0	0	1	9	12	25	59	31	15	2	124	2	149	0	163	5
Leptotrichia sp._HMT_417 (SP61)	1072	259	18	517	558	70	493	51	36	360	127	102	870	569	781	665	122	225	37	207	516
Stomatobaculum sp._HMT_097 (SP610)	82	292	20	84	3	0	0	257	0	0	49	92	1	135	633	55	3	303	0	39	0
Prevotella baroniae (SP614)	0	1	9	20	0	0	85	0	4	16	30	23	0	0	60	39	8	1	0	0	28
Fannyhessea sp._HMT_416 (SP615)	0	0	0	1	0	0	20	0	0	0	1	0	0	0	0	0	0	0	590	0	8
Neisseria oralis (SP62)	946	87	1088	1	91	121	0	1	1613	173	128	107	94	1	0	586	183	1722	495	1776	118
Bacteroidetes_[G-5] bacterium_HMT_511 (SP629)	0	2	26	52	3	13	0	0	4	0	20	1	4	0	0	118	12	22	0	0	28
Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP63)	0	0	5	0	2	0	144	0	0	45	0	34	0	34	0	768	0	0	0	0	372
Fretibacterium sp._HMT_360 (SP637)	0	1	5	0	0	0	31	2	0	9	13	5	0	9	0	47	0	2	0	0	5
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP643)	52	89	13	35	156	0	731	105	3	4	56	9	13	24	71	40	2	15	11	5	11
Desulfobulbus sp._HMT_041 (SP645)	0	0	16	0	0	0	11	0	3	0	1	4	2	4	0	85	0	2	0	0	1
Fretibacterium fastidiosum (SP649)	0	0	6	43	0	0	71	0	0	3	14	2	1	3	8	144	0	24	5	0	44
Pseudoleptotrichia sp._HMT_221 (SP650)	262	967	82	44	199	26	6295	98	32	252	33	138	623	447	171	585	149	78	28	34	115
Pseudoleptotrichia sp._HMT_219 (SP651)	0	2	14	18	2	7	0	0	7	22	0	0	0	7	0	5	9	95	1	7	2
Capnocytophaga leadbetteri (SP652)	36	36	3	278	8	23	14	5	25	103	202	4	9	14	6	94	21	34	7	35	26
Prevotella multiformis (SP660)	0	0	0	0	0	0	137	0	5	70	170	92	13	44	293	347	8	24	1	0	50
Prevotella nanceiensis (SP661)	35	177	33	127	31	35	39	374	3	3	15	97	15	19	7	37	119	5	0	36	2
Rothia dentocariosa (SP662)	649	190	70	60	58	294	268	1078	89	240	43	189	122	426	514	52	70	143	167	49	1255
Parvimonas micra (SP663)	38	15	80	979	21	6	374	2	2	75	31	6	0	12	658	611	0	72	71	5	719
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP664)	4	13	0	0	0	0	1	0	0	0	8	9	0	0	0	1	0	0	0	3	0
Solobacterium moorei (SP674)	15	887	20	475	78	3	199	92	0	12	75	32	13	98	183	82	3	218	137	7	17
Prevotella multisaccharivorax (SP676)	204	8	0	115	0	0	69	0	5	18	118	0	0	0	0	0	0	34	2742	0	385
Ottowia sp._HMT_894 (SP682)	0	1	28	85	0	0	0	0	0	4	3	0	0	0	2	19	4	4	0	0	0
Prevotella maculosa (SP683)	34	1	19	64	6	10	5	2	16	10	19	2	4	7	27	16	11	9	16	6	21
Campylobacter sp._HMT_044 (SP684)	20	10	23	44	96	0	0	0	0	127	0	0	5	9	51	144	0	35	0	2	6
Treponema sp._HMT_238 (SP687)	0	0	0	0	0	0	0	0	0	23	37	49	0	0	0	0	0	0	0	0	0
Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP688)	10	2	4	145	0	0	14	0	0	1	1	2	4	2	439	75	1	10	31	2	4
Anaeroglobus geminatus (SP691)	116	0	0	52	0	0	6	2	0	0	16	1	59	15	103	41	1	14	2934	2	19
Lachnospiraceae_[G-2] bacterium_HMT_088 (SP694)	0	0	0	104	14	0	0	0	0	3	0	0	0	0	0	1	0	0	0	48	0
Bacteroidales_[G-2] bacterium_HMT_274 (SP696)	583	5	198	259	3	0	33	3	7	32	93	9	17	50	28	78	0	43	0	7	22
Actinomyces graevenitzii (SP701)	6	915	4	9	863	2	1022	414	0	41	35	73	86	137	80	22	38	53	0	4	57
Oribacterium asaccharolyticum (SP702)	93	48	65	61	55	3	91	87	0	13	50	8	8	64	574	62	2	251	0	9	18
Limosilactobacillus mucosae (SP709)	186	2	0	70	0	1	35	0	1	6	13	0	0	0	0	0	0	79	553	0	318
Selenomonas flueggei (SP718)	9	0	0	16	0	4	4	0	1	11	9	0	1	3	54	7	0	77	1	0	3
Treponema sp._HMT_262 (SP72)	0	0	0	0	0	7	0	0	0	2	0	117	1	9	0	0	0	0	0	1	0
Alloprevotella sp._HMT_473 (SP725)	4148	2	35	327	900	221	165	0	60	273	207	79	1448	0	13	292	2	0	3	822	31
Mycoplasma faucium (SP728)	0	0	6	21	10	0	52	0	2	14	9	36	2	0	0	104	0	0	0	0	200
Rothia mucilaginosa (SP73)	898	7031	660	721	912	551	1310	5017	536	567	2089	1534	2878	4105	2283	3274	4771	2901	39	1852	1855
Pseudoramibacter alactolyticus (SP731)	66	0	0	3	0	0	9	0	0	0	1	3	0	22	13	4	1	42	24	0	7
Leptotrichia hongkongensis (SP739)	154	93	10	18	28	415	285	38	44	580	30	38	59	106	138	63	145	71	376	53	70
Dialister pneumosintes (SP757)	17	3	16	179	19	0	187	0	0	64	30	7	3	12	0	145	0	87	536	3	40
Streptobacillus felis (SP758)	0	0	0	0	0	0	463	0	0	0	0	257	1	0	0	1075	0	0	0	0	0
Lachnoanaerobaculum saburreum (SP76)	163	4	0	106	6	45	17	15	7	125	58	3	0	8	98	57	8	164	8	26	11
Lancefieldella rimae (SP771)	201	9	4	0	0	0	65	16	1	15	61	1	1	17	6	26	1	25	42	6	35
Oribacterium sp._HMT_102 (SP773)	0	0	0	5	0	0	18	0	0	0	2	0	0	1	40	0	0	12	0	0	4
Granulicatella adiacens (SP776)	290	4084	346	891	972	854	1151	3144	77	716	851	921	283	1267	911	1076	211	2836	41	483	629
Prevotella sp._HMT_304 (SP779)	0	0	0	0	0	0	105	0	4	0	1	66	0	24	0	251	0	0	0	0	366
Treponema sp._HMT_951 (SP780)	0	0	0	0	2	0	0	0	0	0	16	3	0	0	0	47	0	0	0	0	0
Capnocytophaga sp._HMT_332 (SP787)	3	3	0	31	3	27	0	0	9	22	29	1	3	0	4	26	3	18	0	24	8
Porphyromonas sp._HMT_930 (SP8)	1	0	0	36	508	286	69	0	1026	81	19	32	889	1	0	52	322	0	0	416	3
Veillonella sp._HMT_917 (SP803)	0	45	0	8	99	3	882	0	6	1	0	1	36	60	167	17	85	0	3	0	0
Cloacibacterium sp._HMT_206 (SP809)	539	0	0	0	3	6	0	0	263	101	0	59	42	0	5	0	0	0	444	67	0
Pseudostreptobacillus hongkongensis (SP819)	0	0	0	0	54	0	115	0	7	0	2	0	1	0	0	0	0	0	0	0	0
Phocaeicola abscessus (SP820)	14	0	0	9	0	0	19	0	0	0	5	4	2	1	0	27	0	3	0	0	2
Peptostreptococcus stomatis (SP833)	30	822	6	438	56	2	752	26	0	78	37	71	10	186	259	723	3	74	0	5	149
Alloprevotella sp._HMT_914 (SP836)	125	8	0	33	2	0	0	13	1	1	93	12	36	0	0	28	2	0	0	8	0
Catonella morbi (SP84)	17	28	50	8	4	7	49	15	0	3	15	5	3	47	96	70	3	83	0	6	39
Megasphaera micronuciformis (SP851)	17	212	16	219	314	3	693	476	1	8	138	22	17	212	172	29	24	69	6	0	70
Lachnospiraceae_[G-2] bacterium_HMT_096 (SP852)	664	1108	0	62	249	0	193	13	6	21	22	28	51	351	437	165	49	169	0	92	25
Capnocytophaga gingivalis (SP860)	2	47	4	85	17	39	17	11	8	41	31	4	10	5	7	103	13	13	0	8	7
Alloprevotella rava (SP870)	30	264	124	5	319	0	211	25	3	3	182	28	10	82	68	131	47	15	384	6	132
Riemerella sp._HMT_322 (SP876)	13	33	37	97	10	134	10	49	9	46	98	32	19	17	9	76	5	8	0	103	14
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP89)	1	0	0	1008	0	13	0	0	0	8	8	1	2	6	15	35	0	2	1	1	0
Leptotrichia sp._HMT_498 (SP91)	754	5	0	486	3	84	54	26	56	93	67	16	79	40	193	310	25	90	22	465	213
Prevotella sp._HMT_396 (SP96)	1	25	1	9	0	1	3	4	0	0	24	9	1	4	4	12	1	0	0	2	0
Prevotella sp._HMT_305 (SP99)	0	11	0	0	31	0	43	10	0	0	65	0	1	8	16	4	10	0	0	0	0
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP10)	15290	8487	6207	13666	7510	12245	11021	13211	8102	10059	6975	11673	6628	6321	6890	13183	8301	6933	2393	11128	20410
Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP100)	3590	2	265	287	22	79	496	0	100	251	148	12	27	193	409	246	45	3	95	32	254
Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP101)	134	4	3	278	6	0	21	1	9	61	127	36	27	16	172	47	11	10	4	47	51
Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP102)	116	42	328	163	2	27	4	10	26	49	153	13	17	22	20	259	13	48	91	41	230
Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP103)	303	69	148	1209	23	165	13	52	210	491	2561	52	126	48	293	212	89	799	30	374	564
Treponema medium_sp._HMT_237 (SPP105)	3	1	0	0	1	0	14	0	2	3	25	4	1	0	77	233	0	0	16	1	12
Fusobacterium nucleatum_subsp._animalis_simiae (SPP106)	222	24	14	490	11	0	46	7	11	33	42	10	5	12	211	48	16	33	458	14	5
Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP107)	2869	3158	181	1926	345	6855	10	562	4628	3655	5073	711	150	408	334	1278	495	895	313	2300	1223
Kingella_Neisseria denitrificans_elongata (SPP110)	7	235	25	456	6	263	1	178	187	872	190	34	19	386	12	147	90	247	28	72	16
Peptoanaerobacter_Peptostreptococcaceae_[G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP112)	1	0	13	116	1	0	2	0	6	19	1	0	0	0	18	8	4	52	26	16	2
Prevotella scopos_sp._HMT_314 (SPP114)	14	5	44	29	0	0	7	5	33	14	398	88	69	0	6	352	105	1	0	0	22
Prevotella jejuni_scopos_sp._HMT_314 (SPP115)	362	11	0	9	7	14	20	50	8	4	288	26	77	34	9	91	11	3	1	2	3
Fusobacterium hwasookii_sp._HMT_370 (SPP118)	135	11	28	1600	409	19	9	9	20	253	164	113	71	2	17	106	26	20	24	383	12
Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP119)	803	19	492	1391	1811	629	2783	617	3090	871	610	755	1468	126	151	608	487	48	31	801	599
Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP12)	52	0	1	274	370	113	57	0	42	6	4	40	24	0	0	40	463	4	3	94	0
Mogibacterium diversum_neglectum_pumilum_vescum (SPP120)	237	509	7	222	67	0	607	141	0	21	14	20	10	131	509	131	11	376	15	7	27
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP121)	0	0	0	0	5	14	0	0	10	11	0	11	6	1	0	0	4	0	9	7	0
Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP124)	726	225	78	39	85	168	51	127	79	656	36	47	44	89	58	77	89	571	17	165	150
Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP125)	75	22	22	4	1	0	9	10	28	85	5	1	4	2	9	26	22	82	11	4	31
Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP127)	33	187	2	323	0	1	0	2	0	18	31	23	9	16	26	269	0	272	0	39	0
Porphyromonas pasteri_sp._HMT_278 (SPP13)	44	609	153	2452	47	792	709	1103	51	194	626	978	109	274	17	364	183	49	13	439	41
Porphyromonas endodontalis_sp._HMT_285 (SPP130)	0	0	76	42	1	0	389	2	12	419	34	347	14	239	686	522	0	0	0	1	728
Treponema maltophilum_sp._HMT_260 (SPP131)	0	0	1	0	0	0	11	0	2	3	22	2	0	9	0	38	0	28	0	0	8
Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP132)	29	10	8	3	35	2	0	23	37	1	66	437	163	1	0	38	38	13	0	336	8
Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP133)	136	565	29	3337	32	255	113	705	349	557	2977	573	77	116	16	660	114	14	62	132	338
Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP143)	44	43	9	20	28	0	174	3	4	28	16	2	8	18	135	26	15	144	42	1	9
Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP146)	0	0	0	0	0	0	17	0	0	4	6	5	0	1	0	238	0	1	0	0	52
Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP15)	1	1	18	32	1	58	0	2	11	1	16	9	3	0	0	8	25	2	0	132	0
Catonella morbi_sp._HMT_164 (SPP155)	4	1	2	85	0	2	6	0	0	36	18	15	1	0	16	11	1	10	4	2	21
Schaalia odontolytica_sp._HMT_180 (SPP158)	164	1042	56	77	159	7	193	512	1	102	111	42	26	57	194	32	21	196	1	23	64
Lachnoanaerobaculum gingivalis_umeaense (SPP160)	38	419	25	236	2	69	13	107	3	81	86	46	28	69	28	153	10	260	3	87	5
Campylobacter rectus_showae (SPP163)	28	8	217	663	19	10	56	6	19	112	178	93	18	52	8	501	8	151	39	37	109
Prevotella jejuni_veroralis (SPP19)	12	44	0	9	18	0	46	65	4	13	295	51	29	19	3	13	61	6	3	0	6
Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP2)	5	2	2	180	7	3	47	6	10	45	103	0	24	3	18	126	9	182	21	13	50
Eikenella_Neisseria canis_halliae (SPP20)	7	2	0	2	12	32	0	11	6	23	27	4	1	0	0	33	0	1	0	5	6
Eikenella_Kingella halliae_sp._HMT_012 (SPP21)	0	12	0	28	0	4	0	0	19	93	8	1	0	5	0	14	10	2	0	8	0
Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 (SPP22)	0	9	1	75	0	0	0	0	0	0	1	58	0	0	0	6	0	0	0	0	0
Leptotrichia sp._HMT_215_sp._HMT_217 (SPP23)	4	5	0	12	0	0	2	0	0	6	1	10	1	0	0	2	0	5	0	4	0
Veillonella parvula_rogosae_tobetsuensis (SPP24)	298	1205	382	1175	23	120	69	601	57	43	1081	106	140	397	112	532	187	332	138	332	156
Kingella sp._HMT_459_sp._HMT_932 (SPP27)	0	3	2	80	0	3	12	23	0	4	0	2	2	0	2	23	3	4	17	19	10
Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP3)	8	0	1	31	4	1	19	0	0	4	1	0	1	0	0	41	0	3	11	0	20
Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP30)	1	0	12	7	0	0	0	0	8	0	19	0	9	3	36	7	4	2	227	1	19
Tannerella sp._HMT_286_sp._HMT_808 (SPP33)	204	13	1	582	7	15	7	8	12	102	114	17	12	6	34	114	3	10	15	46	6
Prevotella histicola_melaninogenica (SPP34)	9	91	0	11	7	0	86	256	5	11	359	40	62	49	11	25	82	2	5	9	9
Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(6 species) (SPP35)	0	72	3	0	0	0	0	7	0	0	0	26	0	26	1	1	0	0	0	0	0
Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_314 (SPP36)	35	96	2	34	1	1	27	44	6	22	141	94	12	1	98	50	84	1	3	42	23
Prevotella melaninogenica_scopos_sp._HMT_314 (SPP37)	133	88	34	1159	7	183	214	24	42	239	1886	562	93	29	28	548	991	101	18	157	1112
Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_314_ve ...(6 species) (SPP38)	17	29	0	5	5	0	53	38	1	4	128	21	41	21	1	14	42	1	1	0	0
Hallella_Prevotella dentalis_seregens (SPP39)	0	1	0	3	0	0	31	0	2	5	2	18	3	0	13	72	0	13	0	0	116
Lactobacillus delbrueckii_equicursoris_leichmannii (SPP4)	149	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	207	578	0	0
Selenomonas sp._HMT_442_sputigena (SPP41)	74	5	6	298	9	8	123	3	1	81	96	19	28	29	347	135	8	509	37	25	152
Prevotella sp._HMT_306_vespertina (SPP46)	37	264	0	26	1050	0	1114	778	15	22	1268	101	98	232	68	51	111	79	33	5	68
Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP5)	4305	1675	815	7439	2046	1772	2924	1350	545	5068	370	4994	2592	3812	2134	3857	5101	1292	130	4937	6225
Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP50)	353	211	3	345	120	7	147	587	86	344	75	513	161	216	180	280	292	210	11	266	268
Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP51)	346	1779	129	255	3526	104	1103	4565	58	136	311	876	393	2779	3786	1021	614	2789	9	505	431
Streptococcus lactarius_peroris_sp._HMT_074 (SPP52)	13	37	1	9	1	0	12	39	10	23	10	23	41	32	11	18	43	26	0	28	10
Alloprevotella sp._HMT_912_sp._HMT_913 (SPP54)	14	0	0	30	10	17	2	0	4	10	82	0	5	11	0	6	0	0	17	4	3
Prevotella shahii_sp._HMT_317 (SPP55)	0	5	0	8	2	19	6	0	14	7	27	4	13	0	2	26	15	19	37	27	4
Bifidobacterium dentium_moukalabense (SPP57)	9	18	0	27	0	0	46	0	0	95	0	0	0	0	2	0	0	192	2886	0	715
Veillonella atypica_dispar (SPP59)	1035	2299	222	958	1460	296	1969	4259	106	212	3606	313	778	3815	1115	1326	581	586	80	76	1031
Streptococcus anginosus_constellatus (SPP60)	42	5	1	283	16	0	134	12	1	91	14	55	13	12	215	180	3	262	14	5	487
Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP64)	292	40	0	15	33	0	6	423	152	6	11	150	129	0	0	93	54	99	11	653	19
Streptococcus dentirousetti_downei_sobrinus (SPP65)	82	8	0	0	0	1	7	0	3	3	0	2	0	192	6	0	73	402	3	11	18
Kocuria assamensis_palustris (SPP66)	0	0	0	0	1	0	0	0	660	1	0	0	0	0	0	0	29	0	0	2	0
Prevotella loescheii_sp._HMT_472 (SPP68)	54	0	0	16	10	1	0	0	12	23	131	1	2	0	3	0	5	4	1	55	8
Centipeda_Selenomonas dianae_noxia_periodontii (SPP7)	86	2	8	100	1	8	8	0	1	14	3	0	0	3	0	3	1	12	6	0	3
Peptoanaerobacter_Peptostreptococcaceae_[G-7] bacterium_HMT_081_stomatis (SPP72)	0	4	0	0	0	0	91	0	0	0	0	1	0	9	19	19	1	0	0	1	100
Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP76)	3	1	0	0	7	1	0	0	0	7	59	5	0	1	0	35	0	14	0	1	5
Aggregatibacter aphrophilus_paraphrophilus (SPP78)	0	5	0	0	25	0	0	0	161	0	0	65	8	2	0	6	34	0	0	23	0
Leptotrichia buccalis_sp._HMT_225 (SPP8)	13	19	0	23	0	0	0	5	4	19	26	19	16	14	1	28	5	26	7	47	11
Streptococcus salivarius_thermophilus_vestibularis (SPP80)	191	2028	175	168	4024	29	1365	7964	103	334	574	743	432	8135	2831	1797	2780	1084	6	1532	1042
Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP81)	32	192	2	30	139	2	161	869	51	94	60	239	131	506	123	187	811	77	0	432	137
Lautropia dentalis_mirabilis (SPP82)	99	10	176	1	120	8	0	0	1537	37	2	46	1	5	0	2	19	5	79	213	8
Neisseria cinerea_flavescens_perflava_subflava (SPP87)	449	5885	262	4952	140	764	1795	7513	422	1594	4337	2384	3883	1482	443	1920	656	3260	116	2042	267
Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP89)	932	499	36	1006	236	34	332	1733	375	1267	255	996	522	1324	434	1662	1645	1369	84	1059	1142
Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP9)	1518	328	136	1433	321	381	199	1151	121	858	185	650	196	622	694	1013	411	514	97	429	917
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP96)	6	18	0	84	0	45	4	11	18	5	3	5	6	0	0	1	3	0	5	7	0
Peptococcus sp._HMT_167_sp._HMT_168 (SPP97)	52	5	15	25	2	0	1	0	2	4	4	9	1	7	1	30	0	4	31	2	14
Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP99)	680	52	87	325	29	41	192	106	23	111	140	35	49	89	448	208	74	122	2779	46	61