taxon lfc_(Intercept) lfc_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER se_(Intercept) se_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER W_(Intercept) W_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER p_(Intercept) p_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER q_(Intercept) q_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER diff_(Intercept) diff_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER passed_ss_(Intercept) passed_ss_Age_HIV_Shedding_AgeADULT HIV-Pos SHEDDER Capnocytophaga sp._HMT_901 (SP1) -1.58986689268691 1.65951838146897 NA 0.467196341837653 NA 3.55207914287489 1 0.0380342445736153 1 1 FALSE FALSE TRUE FALSE Prevotella micans (SP101) -0.174935858336451 0.455132204159977 0.257131861116938 0.515952278374688 -0.680335208466809 0.882120737200149 0.510357895717219 0.396578636419464 1 1 FALSE FALSE TRUE TRUE Schaalia lingnae (SP114) -0.480549530434372 0.702624291730984 0.429281978610348 0.676798961270091 -1.11942628476971 1.03815805274351 0.279482409944911 0.314632033631497 1 1 FALSE FALSE TRUE FALSE Treponema sp._HMT_257 (SP12) 0.0209872829637743 0.218132648598704 0.356599901257274 0.533850780013667 0.0588538664474634 0.408602285067598 0.954512075520541 0.693550339295164 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP122) -0.680742735053839 1.21781798580233 0.328811115491138 0.591091062300322 -2.07031545766641 2.06028827616342 0.0560957221966432 0.057158355493322 1 1 FALSE FALSE TRUE TRUE Oribacterium sp._HMT_078 (SP123) -0.879542591131645 1.33267391471369 0.436903550218081 0.666756474679084 -2.01312759004275 1.99874161755252 0.0612417037821184 0.0629204547107088 1 1 FALSE FALSE FALSE FALSE Prevotella pleuritidis (SP125) -0.0242060658589286 0.0937152740072306 0.444751099092888 0.826947701908891 -0.0544260956483283 0.113326724036964 0.957269493890371 0.911181307855392 1 1 FALSE FALSE TRUE TRUE Butyrivibrio sp._HMT_455 (SP126) -0.809414429385734 0.806055147318865 0.0782629495851739 0.427981499780076 -10.3422428323487 1.88338782805581 2.70222766807138e-06 0.0923057981920973 0.000721494787375058 1 TRUE FALSE FALSE FALSE Oribacterium sinus (SP127) -0.813364877077086 1.5097809243151 0.365484656823545 0.749286368851622 -2.22544192181992 2.01495848193399 0.0383577464005781 0.0582812475835666 1 1 FALSE FALSE FALSE TRUE Lancefieldella sp._HMT_199 (SP129) -0.732808010204093 1.02604928903373 0.354535093962175 0.588751482757992 -2.06695478863448 1.74275448823878 0.0564498354396853 0.101833548330284 1 1 FALSE FALSE FALSE FALSE Selenomonas dianae (SP130) -0.114317448167509 0.212394721581288 0.270700825299146 0.581156775068956 -0.422301808800098 0.365468890139131 0.68094097220888 0.721691868183824 1 1 FALSE FALSE TRUE TRUE Leptotrichia buccalis (SP132) 0.557940949291504 -0.984803394671837 0.252565914879308 0.55150088418759 2.2090904449958 -1.78567872311309 0.0403700681105664 0.091010364549678 1 1 FALSE FALSE FALSE FALSE Cardiobacterium valvarum (SP137) 0.130523130964136 -0.110829549212058 0.420214022705704 0.604557210215317 0.310611078906208 -0.183323509073005 0.760672504973534 0.857172681824908 1 1 FALSE FALSE TRUE TRUE Fusobacterium periodonticum (SP138) -0.591320134516315 1.12120262483375 0.603328737522375 0.765246340272853 -0.980096086496104 1.46515254739275 0.339354569307878 0.159231991563835 1 1 FALSE FALSE TRUE TRUE Treponema denticola (SP148) -0.443353091538367 0.738399870296931 0.29951433795073 0.523526474432836 -1.48023995970202 1.41043463197707 0.160959542734871 0.180242406744003 1 1 FALSE FALSE TRUE TRUE Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP151) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Peptidiphaga sp._HMT_183 (SP152) -0.0197690556458809 0.0320367078130854 0.441638090596259 0.6641933187292 -0.0447630221822364 0.0482340109569021 0.964976490472929 0.962262902980341 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP157) -1.38564161994686 2.25466264957485 0.385020687425996 0.625236200312922 -3.59887576226198 3.60609742117686 0.00221430076711407 0.00217986367009385 0.558003793312745 0.558045099544025 FALSE FALSE TRUE TRUE Romboutsia timonensis (SP158) -0.653942169141607 0.644119788870951 NA 0.360063106947598 NA 1.78890804540187 1 0.101169603743536 1 1 FALSE FALSE FALSE FALSE Prevotella veroralis (SP159) -0.280427266579218 0.478957541443944 0.361524306809185 0.641117643046227 -0.775680255234483 0.747066543307419 0.448594849709962 0.46523148832292 1 1 FALSE FALSE TRUE TRUE Eikenella halliae (SP161) 0.328218600858061 -0.483188170609322 0.389160913188346 0.608694014229572 0.843400736649033 -0.79381127350315 0.41007281485365 0.437645669257949 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_217 (SP162) -0.361865184628034 0.906348838152635 0.067556425348199 0.352457511733904 -5.3564880433343 2.57151233263232 0.0127308121914947 0.0823847626820016 1 1 FALSE FALSE FALSE TRUE Leptotrichia sp._HMT_212 (SP163) 0.116558185063072 -0.0983510509820678 0.444937590644597 0.652160924127438 0.261965245270039 -0.150807948381233 0.796322588099871 0.881804402685407 1 1 FALSE FALSE TRUE TRUE Treponema socranskii (SP171) -0.686824510855566 1.20564448741785 0.483328077428972 0.610123134720383 -1.42103168205969 1.97606748344396 0.172400627109386 0.0636787747724389 1 1 FALSE FALSE TRUE FALSE Tannerella forsythia (SP172) -0.365265589499018 0.688451385063118 0.317348211552799 0.522456235745829 -1.1509930612552 1.3177206777527 0.272153731092469 0.212200413911866 1 1 FALSE FALSE TRUE TRUE Prevotella oris (SP176) -0.307841807290197 0.625115552188041 0.462135878341536 0.590603324965628 -0.666128343886536 1.05843554508336 0.513336501781327 0.30312851513473 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-5] bacterium_HMT_505 (SP177) 0.439998946546351 -0.653271021203127 0.273587506646799 0.400462505362758 1.60825672173104 -1.63129135051323 0.158903597716399 0.153949920544516 1 1 FALSE FALSE FALSE FALSE Granulicatella elegans (SP185) 0.881399484104489 -1.52470070199056 0.295460485120968 0.64681001754187 2.98313828241237 -2.35726204084627 0.00797228796610675 0.0299338388515677 1 1 FALSE FALSE FALSE FALSE Tannerella serpentiformis (SP188) -0.0738532956180018 0.119713508729696 0.310247999412674 0.569778559831168 -0.238046001127525 0.210105323663229 0.815294138066643 0.836612473868942 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_392 (SP193) -0.371322779511475 0.704767021333579 0.471464806368997 0.678655435232813 -0.787593844747884 1.03847546891275 0.441182785880642 0.312798422339466 1 1 FALSE FALSE TRUE TRUE Prevotella melaninogenica (SP194) -0.215654436115696 0.463787652632665 0.473261350211893 0.736488773472566 -0.455677261663438 0.629728068285268 0.653786972497285 0.536372447265378 1 1 FALSE FALSE TRUE TRUE Prevotella histicola (SP195) -0.186164797211624 0.412180784550538 0.533183334058254 0.802209494025986 -0.349157194758237 0.513806914054281 0.730811071324494 0.613310813021988 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP201) -0.720988617879136 1.33218564449569 0.299519156897163 0.441003405646688 -2.40715360362303 3.0208057975021 0.137790546103749 0.0943350264199959 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP202) -0.0544887850114786 0.181747763200284 0.396077517795508 0.561727376890137 -0.13757101214619 0.323551549519421 0.892026899657258 0.749811794014693 1 1 FALSE FALSE TRUE TRUE Centipeda periodontii (SP203) -0.382749911630283 0.669697671598949 0.32193838882372 0.539814208001769 -1.18889180326942 1.24060771589909 0.252963638572701 0.233805351094144 1 1 FALSE FALSE TRUE TRUE Aggregatibacter actinomycetemcomitans (SP204) 0.143691587988095 0.258630465895262 0.251094428516354 0.404105323879409 0.57226115623962 0.640007568849654 0.587929470677073 0.545815107557401 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_246 (SP205) 0.0534301944118549 0.0353878095628967 0.395706906588644 0.517764988007358 0.135024669830689 0.0683472432137373 0.897008174789962 0.947730011203201 1 1 FALSE FALSE TRUE FALSE Prevotella denticola (SP208) 0.0091258466847776 0.0112106066880208 0.62381216199863 0.785265741075284 0.0146291580073388 0.0142761947982983 0.988498354572359 0.988775838898885 1 1 FALSE FALSE TRUE TRUE Alloprevotella tannerae (SP209) -0.491649794590762 1.06626214516443 0.544552783698425 0.660843879782551 -0.90285057630527 1.61348569274074 0.379220534354632 0.125046404010604 1 1 FALSE FALSE TRUE TRUE Eikenella corrodens (SP210) -0.205049695706028 0.445229356915745 0.288113503278528 0.522436812966786 -0.711697623931912 0.852216662121109 0.485299416767185 0.404708457422963 1 1 FALSE FALSE TRUE TRUE Capnocytophaga sputigena (SP216) 0.565687224244315 -0.914949304038874 0.500154996606831 0.615024656329805 1.13102383877412 -1.48766280281979 0.272889939650653 0.154148954169111 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] sp._HMT_907 (SP217) 0.100243386086555 -0.200931994667506 0.290026353927664 0.473367119121177 0.345635438742084 -0.424473915806707 0.736136253737856 0.679403374421652 1 1 FALSE FALSE TRUE TRUE Streptococcus sanguinis (SP22) 0.643832684524701 -1.04031480848803 0.281525640472822 0.632304809020605 2.28694154977637 -1.64527423110921 0.033845386397523 0.116356090585209 1 1 FALSE FALSE FALSE TRUE Treponema sp._HMT_256 (SP235) -0.155055780124393 1.67857294550503 0.208933551555325 0.358564990162964 -0.742129633896234 4.68136318814096 0.51183094280461 0.0184181139584104 1 1 FALSE FALSE TRUE FALSE Prevotella fusca (SP236) 0.00456860009301096 0.00360996108437698 0.369436620039077 0.482348524761866 0.0123663974960785 0.0074841341873269 0.990436126624231 0.994211846062897 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_912 (SP238) 0.297437271867544 -0.579771793621451 0.341977603091351 0.519991087771327 0.869756583995035 -1.11496486623712 0.401496369191768 0.286697339283873 1 1 FALSE FALSE FALSE FALSE Prevotella shahii (SP239) -0.177279331095318 0.598756174088527 0.220096756096284 0.518540702792263 -0.805460899286335 1.15469464762229 0.437618732810385 0.272683998706849 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_309 (SP240) 0.103205359704782 0.0336484847205219 0.413353815459929 0.608413717346881 0.249678013955062 0.0553052696892722 0.807059173698103 0.956805406784742 1 1 FALSE FALSE TRUE TRUE Treponema amylovorum (SP26) -0.0421500014178506 1.10235852271912 0.332667331137686 0.4712625785948 -0.126703157997818 2.33915989257222 0.90411293783784 0.0664495703273675 1 1 FALSE FALSE TRUE TRUE Veillonella dispar (SP268) -0.0184949723213979 0.118758590992642 0.336159132723515 0.534212578270221 -0.0550185032057711 0.222305868156797 0.956698146626153 0.826447946079948 1 1 FALSE FALSE TRUE TRUE Streptococcus mutans (SP270) -0.239063280104013 0.368087202744573 0.611972562746082 0.792965710193907 -0.390643788066695 0.464190567148942 0.701212763760411 0.648764475607449 1 1 FALSE FALSE TRUE FALSE Streptococcus anginosus (SP272) -0.740484671222331 1.12021928942205 0.380292943290866 0.587286392771655 -1.94714281262898 1.90744976081475 0.0692894391397305 0.0745773336839453 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_942 (SP273) 0.292897012980421 -0.654932680248857 0.395493713708074 0.649099366626392 0.740585761109258 -1.00898678064159 0.480113848806779 0.342520957920918 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_317 (SP274) 0.73028436093252 -1.19160524220171 0.246496216093294 0.502452319067373 2.96265951870078 -2.37157874883235 0.00799534339634438 0.0284339607191498 1 1 FALSE FALSE TRUE TRUE Bulleidia extructa (SP276) -0.415200654847433 0.53842670931965 0.104500015852376 0.403605911955445 -3.97321140538367 1.33404069011528 0.00733996038167843 0.230591178635804 1 1 FALSE FALSE FALSE TRUE Leptotrichia sp._HMT_215 (SP29) -0.836788117155783 1.46409917200986 0.563525460005992 0.672665090663698 -1.48491625763792 2.17656482004333 0.15486856819904 0.0430700618653099 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP3) 0.335242176945949 -0.774710387283213 0.307564016629231 0.528731333657856 1.08999154263902 -1.46522503579205 0.301284925841187 0.173580911570057 1 1 FALSE FALSE TRUE FALSE Haemophilus parahaemolyticus (SP30) 1.42470749239331 -2.48263725995155 0.128491872726677 0.534247307522437 11.0879191201758 -4.64698132305943 3.9066286612287e-06 0.00165114715325817 0.00103916322388684 0.427647112693866 TRUE FALSE FALSE FALSE Campylobacter gracilis (SP300) -0.723291723825824 1.35215290612539 0.298736538152027 0.494878748095767 -2.42116926272253 2.73229131646551 0.0256487646453099 0.0132329779973341 1 1 FALSE FALSE TRUE TRUE Prevotella salivae (SP301) -0.474898230695296 0.917464293146965 0.409731441836795 0.627806675564249 -1.15904756678268 1.46138027653558 0.260796897250361 0.160253123079103 1 1 FALSE FALSE TRUE TRUE Shuttleworthia satelles (SP303) -0.439985044957132 0.611216754933865 0.362798849444699 0.595138029625755 -1.21275204050557 1.02701680031811 0.243979296536407 0.320690208208373 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_443 (SP304) 0.135722828947816 -0.311531373878358 0.0927346474961004 0.534730642140452 1.46356116739996 -0.582594954033944 0.174025688233389 0.573067239997668 1 1 FALSE FALSE TRUE TRUE Leptotrichia hofstadii (SP309) -0.0991491229614266 0.209905827606219 0.472606606681047 0.598176019896354 -0.209792079839333 0.350909800166496 0.836186200765832 0.729729545222473 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-2] bacterium_HMT_091 (SP31) -1.74469282292386 1.92950662353598 0.0655673090567315 0.42201131114638 -26.6091875360369 4.57216802624208 2.4530437080534e-11 0.000800532637916065 6.67227888590524e-09 0.209739551134009 TRUE FALSE TRUE TRUE Treponema sp._HMT_231 (SP312) -0.335402295927478 0.434748389541768 0.416115351382087 0.536718140025106 -0.806032016875782 0.810012476048289 0.446737849102096 0.444592478978428 1 1 FALSE FALSE TRUE TRUE Cardiobacterium hominis (SP315) 0.264430702921899 -0.330988782083124 0.540574521849113 0.668906000971065 0.489166048775987 -0.494821068435057 0.630975549426195 0.627060572699851 1 1 FALSE FALSE TRUE TRUE Filifactor alocis (SP325) -0.415836444076159 0.736850714130566 0.258466272313636 0.658778760789039 -1.60886153676393 1.11851012508056 0.133622603198281 0.285240395048454 1 1 FALSE FALSE TRUE TRUE Schaalia sp._HMT_172 (SP326) -0.767390684776508 1.13288602324419 0.320692736999265 0.59801484488792 -2.39291569855 1.89441120555546 0.0293297401355556 0.0763915511487662 1 1 FALSE FALSE TRUE FALSE Selenomonas noxia (SP329) -0.0600091538141559 0.178205793807913 0.620359444660204 0.796278636779266 -0.0967328769323813 0.223798285646225 0.924007445574166 0.825434693680007 1 1 FALSE FALSE TRUE TRUE Fusobacterium sp._HMT_248 (SP330) -0.318843834755407 0.831253584955993 0.361074144502202 0.543228813536573 -0.883042554029959 1.53020893634912 0.400185044144137 0.160321704205803 1 1 FALSE FALSE TRUE TRUE Prevotella koreensis (SP331) -0.619899686167203 1.25004750829776 0.213512841568067 0.410219357008241 -2.90333678112556 3.04726602229218 0.027215778541807 0.0225910664172099 1 1 FALSE FALSE FALSE FALSE Clostridioides difficile (SP335) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_472 (SP337) 0.195477101811553 -0.162689141209256 0.2682271084864 0.40820599171886 0.728774592973196 -0.398546676211708 0.484670409164521 0.699517176564706 1 1 FALSE FALSE TRUE TRUE Veillonellaceae_[G-1] bacterium_HMT_155 (SP34) -0.178530864635059 0.218508560420114 0.278186822025844 0.606220129087203 -0.641766074089854 0.360444251082733 0.532178495606373 0.72430386013977 1 1 FALSE FALSE FALSE FALSE Campylobacter concisus (SP340) -0.294612026676598 0.601963436114242 0.213530214884698 0.41234424490462 -1.37972055540562 1.45985652413673 0.183695060501525 0.160667107275697 1 1 FALSE FALSE TRUE TRUE Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP342) 0.623745676428442 -0.964294681002494 0.429850750566758 0.623298294018346 1.45107499662623 -1.54708378036105 0.184813648369217 0.160430215584772 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_909 (SP350) 0.181452677315606 -0.590257295824948 0.259944400871689 0.506157522869846 0.698044184476098 -1.16615335968587 0.501058348853373 0.27061135490923 1 1 FALSE FALSE TRUE TRUE Stomatobaculum longum (SP352) -0.678357676533948 1.27351832336461 0.606081614016122 0.778795000572542 -1.11925136952909 1.63524203728627 0.276983559038891 0.118457342617206 1 1 FALSE FALSE TRUE TRUE Dialister invisus (SP354) -0.966875006018614 1.77842364996277 0.674732100651311 0.816313196979343 -1.43297614725207 2.17860455587829 0.168114631581018 0.042157782157448 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP357) -0.158438594120688 0.215120524224344 0.259377423309803 0.570134036583197 -0.61084188476746 0.377315701959416 0.554933377000022 0.713823133528056 1 1 FALSE FALSE TRUE TRUE Streptococcus hongkongensis (SP397) -0.104453719709546 0.182285207060156 0.463934788618577 0.676193257491732 -0.225147417852776 0.269575605850203 0.824548803953643 0.790731606943284 1 1 FALSE FALSE TRUE TRUE Lautropia mirabilis (SP399) 0.661570895804945 -1.07135667822846 0.524532405814297 0.926817877944537 1.26125838646309 -1.15595167478262 0.222482490744453 0.262030235637079 1 1 FALSE FALSE TRUE TRUE Mogibacterium timidum (SP401) -1.25870943973144 1.36921520540951 0.064992942831607 0.469545434242499 -19.3668633068776 2.91604412599266 1.22702124065164e-06 0.0267688224181536 0.00032884169249464 1 TRUE FALSE FALSE FALSE Veillonella sp._HMT_780 (SP402) 0.584913660749179 -1.05616128397089 0.421489061757243 0.661499448024428 1.38773153047103 -1.59661702987829 0.183141047257039 0.128771454859546 1 1 FALSE FALSE TRUE FALSE Bacteroidetes_[G-5] bacterium_HMT_507 (SP403) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptidiphaga gingivicola (SP409) -0.930167190061703 1.97263947257562 0.375043817981436 0.516858517442122 -2.48015603901447 3.81659468888701 0.0238979206270258 0.00138021634875725 1 0.358856250676885 FALSE FALSE FALSE FALSE Alloprevotella sp._HMT_308 (SP411) -0.308130245193303 0.625620318518478 0.401261250389733 0.671280633195536 -0.767904313945155 0.931980288989272 0.45198280354764 0.36303913366381 1 1 FALSE FALSE TRUE TRUE Mitsuokella sp._HMT_521 (SP415) 0.0426848335014739 0.0519379221912302 0.244701753183626 0.396689531392901 0.174436157265464 0.130928391301026 0.86500365993259 0.898428479717707 1 1 FALSE FALSE TRUE TRUE Butyrivibrio sp._HMT_080 (SP417) -0.0767671518053455 0.100716459935942 0.234173618240527 0.42822141935562 -0.327821521408512 0.235197155918772 0.750544047881462 0.819319943758961 1 1 FALSE FALSE TRUE TRUE Cryptobacterium curtum (SP423) 2.84181118031814 -3.25626645953287 NA 0.387328952392889 NA -8.40697923410038 1 1.48586375317524e-05 1 0.00404154940863666 FALSE TRUE FALSE FALSE Johnsonella sp._HMT_166 (SP424) -0.651797350145931 0.790658592317937 0.064992942831607 0.309074650889351 -10.0287403793163 2.55814765152317 0.000555793130025215 0.0627610825026625 0.143394627546505 1 FALSE FALSE FALSE TRUE Prevotella saccharolytica (SP429) -0.038019113187785 0.122800007194956 0.221749252143177 0.396389910231241 -0.17145091954239 0.309795996379723 0.866160754992613 0.760978290305218 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-3] bacterium_HMT_280 (SP430) -0.322280112838622 0.174618298323891 0.0933476935411064 0.381386334584244 -3.45247001412738 0.457851481527898 0.0135918532621234 0.663171682309915 1 1 FALSE FALSE FALSE TRUE Leptotrichia trevisanii (SP464) -0.0630010559626572 0.266702738637383 0.284106635321364 0.600308621897246 -0.221751441642305 0.444276042203896 0.82731290286062 0.662793369196708 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum orale (SP468) -0.513191894085572 0.984478204079948 0.33114260639646 0.562803939858507 -1.54976099170746 1.74923829482689 0.137695638787249 0.0963860749902084 1 1 FALSE FALSE TRUE TRUE Corynebacterium matruchotii (SP469) 0.512057651579291 -0.809708500833562 0.465238292946947 0.622554286474299 1.10063522143841 -1.300623123839 0.284804763189729 0.208942299318891 1 1 FALSE FALSE TRUE TRUE Scardovia wiggsiae (SP482) -0.05091117034864 0.180220991669209 0.168636295670959 0.399537331904039 -0.301899245035465 0.451074223303103 0.767504379253448 0.659368347284717 1 1 FALSE FALSE TRUE TRUE Leptotrichia shahii (SP483) 0.536353130373322 -0.945552814820596 0.347420638262169 0.650409809115273 1.54381482072053 -1.45378006538185 0.14003196636258 0.163221407941209 1 1 FALSE FALSE TRUE TRUE Haemophilus parainfluenzae (SP484) 0.0469921569486327 0.0041561147700893 0.329844083011488 0.533725116335819 0.142467788173105 0.00778699492094781 0.88821045417707 0.993868121212449 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] sp._HMT_931 (SP486) -0.0797848022554411 0.147588133317555 0.362627255020881 0.547659285477709 -0.220018768999718 0.269488963724622 0.829554999794005 0.792131443887673 1 1 FALSE FALSE TRUE TRUE Abiotrophia defectiva (SP487) 0.264272666514882 -0.357928313157087 0.448619359194706 0.624370196204447 0.589079942937071 -0.573262970162472 0.563554469173165 0.573972386236523 1 1 FALSE FALSE TRUE TRUE Kingella sp._HMT_012 (SP488) 1.06518304325517 -2.53007022122085 0.352169905783182 0.497526936076007 3.02462824268398 -5.0852929515244 0.0115597243839369 0.000352051999748673 1 0.0943499359326444 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP489) -1.1129048244235 1.74689013500417 0.368137134144844 0.585695708561292 -3.02307135358321 2.98258995152149 0.00856079854335972 0.00929642546860153 1 1 FALSE FALSE FALSE TRUE Treponema lecithinolyticum (SP490) -1.02243882087429 1.79011348513711 0.403271021497691 0.646876484721609 -2.5353639770026 2.76731884280429 0.0295974745257155 0.0198785500446259 1 1 FALSE FALSE FALSE FALSE Capnocytophaga granulosa (SP491) 0.264211598268247 -0.375977907539237 0.478780940378648 0.699218252646637 0.551842347899842 -0.537711803311926 0.587489094671728 0.597018631701573 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum (SP51) 0.0676063033827726 -0.0319186414896556 0.220176592284023 0.391910608024926 0.3070549084326 -0.0814436783186677 0.762141546242327 0.935940938650697 1 1 FALSE FALSE TRUE TRUE Lancefieldella parvula (SP515) -1.36091385097428 2.32912672094903 0.492224287008845 0.670287655863663 -2.76482466812902 3.47481667098279 0.0127619619152405 0.00270371933569819 1 0.686744711267341 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_218 (SP517) -0.187266639885146 0.358391151286619 0.540379810961117 0.717042537715002 -0.346546329242158 0.499818535771536 0.733447740164407 0.624006505366336 1 1 FALSE FALSE TRUE TRUE Streptococcus intermedius (SP518) -0.182440246687389 0.409553353994676 0.352357485627247 0.591559597336292 -0.517770316026122 0.692328137078387 0.61092380349 0.497566309840743 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_300 (SP52) 0.205489976662659 -0.172101077423655 0.359975667078101 0.571025951301011 0.570844074908196 -0.301389239896267 0.577840193326065 0.767884539914603 1 1 FALSE FALSE TRUE TRUE Oribacterium parvum (SP521) -0.529978397919135 0.627455141901951 0.140688445705461 0.571607776142086 -3.7670357026239 1.0977022498483 0.00311637497862464 0.295781805586588 0.775977369677535 1 FALSE FALSE FALSE TRUE Prevotella nigrescens (SP527) 0.0331265173393428 0.0284209840863462 0.77052955064753 0.978163903285002 0.0429918843625196 0.0290554415174175 0.966156601524889 0.977123401445727 1 1 FALSE FALSE TRUE TRUE Prevotella pallens (SP530) -0.456003557316147 0.8294582389438 0.381086245238374 0.637839166582847 -1.19658886410584 1.30041910625767 0.246990447351268 0.209861854537588 1 1 FALSE FALSE TRUE TRUE Rothia aeria (SP532) 0.117527629217443 -0.101931683584843 0.205952102816557 0.640205568452033 0.570655155301451 -0.15921711495154 0.575288917802049 0.875270706773764 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_847 (SP538) 0.464390173914852 -0.629038558768315 0.391368182798945 0.528670481318321 1.18658131735103 -1.18984997459989 0.256625488719263 0.255382320521682 1 1 FALSE FALSE TRUE TRUE Corynebacterium durum (SP55) 0.247104375581701 -0.335707761015939 0.368601670973875 0.619061458718286 0.670383221347944 -0.542285028874182 0.511123818136743 0.594272981596638 1 1 FALSE FALSE TRUE TRUE Leptotrichia wadei (SP550) -0.23241025310514 0.493110332364191 0.353833236534163 0.59025260090947 -0.656835562938138 0.83542254892973 0.519164133272146 0.413862363696815 1 1 FALSE FALSE TRUE TRUE Prevotella intermedia (SP551) -0.225659279968609 0.614450476918709 0.20352556781658 0.596595784976694 -1.10875150670002 1.02992761999268 0.296285123245745 0.329926506379129 1 1 FALSE FALSE TRUE TRUE Porphyromonas gingivalis (SP553) -0.712808744366306 0.954355164094274 0.359779583669771 0.658978277738296 -1.98123733730419 1.44823463281635 0.0880210990751315 0.190816744207725 1 1 FALSE FALSE TRUE TRUE Kingella oralis (SP564) 0.818521865131347 -1.34602087454966 0.3908442002923 0.641182820388696 2.09424078576374 -2.09927782178206 0.0498798007752588 0.0493849773094257 1 1 FALSE FALSE FALSE TRUE Prevotella oulorum (SP567) -0.0703933642034174 0.209580776786177 0.347193939840954 0.483486921999025 -0.202749403505326 0.433477654203436 0.841486278457559 0.669549356813607 1 1 FALSE FALSE TRUE TRUE Neisseria sp._HMT_018 (SP568) 0.00979686979060814 0.596628150430476 0.390858727564701 0.525018356305731 0.0250649892140029 1.13639483889406 0.980617069656189 0.288684278334248 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia goodfellowii (SP569) -0.387843799958565 0.74500082500324 0.24216163841113 0.578146539146215 -1.60159058430264 1.28860206636094 0.127663509920002 0.214798039308586 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_subsp._vincentii (SP585) -0.484117800024364 0.933598539472833 0.375057962421319 0.666963400059621 -1.29078128857463 1.39977476933424 0.212265672498145 0.177697223886849 1 1 FALSE FALSE TRUE TRUE Prevotella aurantiaca (SP588) -1.64578552859688 2.80555463060431 0.217204315592695 0.553726596408191 -7.57713088759751 5.06667848140734 3.40673438802481e-05 0.000674901675954098 0.00895971144050525 0.178848944127836 TRUE FALSE FALSE FALSE Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP589) -0.856122126845159 0.772860053345239 0.107547832210002 0.363493771626091 -7.96038478184722 2.12619888887737 0.000504510324518146 0.0868210695819341 0.1306681740502 1 FALSE FALSE FALSE TRUE Prevotella jejuni (SP60) -0.046845419521238 0.139012668527298 0.506265411772241 0.752093142313706 -0.0925313450848838 0.184834378491533 0.927297980337975 0.855425551541336 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_225 (SP609) 0.507154624850957 -0.762566100025249 0.390084874713603 0.66688769590705 1.30011353355678 -1.1434700395665 0.211979838795555 0.269664347322795 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_417 (SP61) -0.0766334672660508 0.220500957145785 0.373301214595908 0.548281905975026 -0.205285877114022 0.402167123778527 0.839532142115006 0.692049347380497 1 1 FALSE FALSE TRUE TRUE Stomatobaculum sp._HMT_097 (SP610) -1.51219383955164 2.29886295782576 0.406603333465973 0.584980279275192 -3.71908864263698 3.92981274629313 0.00257465201799808 0.00172609871940129 0.643663004499521 0.445333469605533 FALSE FALSE FALSE TRUE Prevotella baroniae (SP614) 0.0178437494855092 -0.081858767260601 0.124025274381535 0.488781935268131 0.143871880747605 -0.167475025883875 0.888203543873784 0.870035508885608 1 1 FALSE FALSE TRUE TRUE Fannyhessea sp._HMT_416 (SP615) 4.29234421863272 -5.64307188148401 0.064992942831607 0.399358973351621 66.0432353363954 -14.130324490081 7.64940032044374e-06 0.000767783715331936 0.00202709108491759 0.201927117132299 TRUE FALSE FALSE FALSE Neisseria oralis (SP62) 1.00763649717048 -1.77031959140272 0.41232262589388 0.936304962758899 2.44380597592967 -1.89075104994245 0.0257353866502051 0.0758267818586459 1 1 FALSE FALSE FALSE FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP629) -0.486502145362926 1.09902864527053 0.272112158856711 0.451421603134784 -1.78787360111721 2.4345947062316 0.101344073717997 0.0331387367456481 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP63) -1.0500711902069 1.72792391169716 0.248905553029679 0.465250689193187 -4.21875356907642 3.71396314252351 0.00556893428973086 0.00992295516413694 1 1 FALSE FALSE FALSE FALSE Fretibacterium sp._HMT_360 (SP637) -0.00114202329150007 -0.0238254392956547 0.0706938049199639 0.401080109593657 -0.0161545031108881 -0.0594031933415815 0.987463583565093 0.953929078971661 1 1 FALSE FALSE TRUE FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP643) -0.747489673958169 1.30675309258885 0.435302292729437 0.621383531328294 -1.71717375819744 2.10297348852404 0.103104013207277 0.0497993880932989 1 1 FALSE FALSE TRUE TRUE Desulfobulbus sp._HMT_041 (SP645) 0.037798844585115 0.0565535338141702 0.0898673282985778 0.462245413262947 0.420607191743044 0.122345256851689 0.685112881942345 0.905643162321037 1 1 FALSE FALSE TRUE TRUE Fretibacterium fastidiosum (SP649) -1.37503451447873 1.88488585466198 0.136832721321346 0.394635848079472 -10.0490182552865 4.77626618016314 7.0402828758908e-07 0.000574855573092655 0.000190087637649052 0.152911582442646 TRUE FALSE FALSE FALSE Pseudoleptotrichia sp._HMT_221 (SP650) -0.18368336418877 0.407838276760544 0.385646918089232 0.657284249496951 -0.476299318295781 0.62048995860266 0.639292528301102 0.542307135776922 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia sp._HMT_219 (SP651) 0.0431158710010282 0.109472053325583 0.283132348065144 0.501240123971065 0.152281684857528 0.218402414512016 0.881495182387067 0.830785715077321 1 1 FALSE FALSE TRUE TRUE Capnocytophaga leadbetteri (SP652) 0.0166623328365068 0.0572333069663095 0.311051643038686 0.53168816884687 0.0535677377355453 0.10764449976466 0.957838794851671 0.915406274844954 1 1 FALSE FALSE TRUE TRUE Prevotella multiformis (SP660) -0.861665953037579 1.62815591177723 0.404855146924063 0.53494860113271 -2.12833147752769 3.04357448235165 0.056743702498787 0.0111750170090272 1 1 FALSE FALSE TRUE FALSE Prevotella nanceiensis (SP661) 0.147751795584339 -0.176800682557008 0.434450310358276 0.697155978775944 0.340089055207471 -0.253602763139795 0.737725972200275 0.802676506649062 1 1 FALSE FALSE TRUE TRUE Rothia dentocariosa (SP662) -0.0680045698272212 0.205400386627832 0.210500200613852 0.528229683005497 -0.323061781551319 0.388846733222478 0.750176877116127 0.701712830807837 1 1 FALSE FALSE TRUE TRUE Parvimonas micra (SP663) -1.01543762396809 1.62241313546449 0.355041945904581 0.686280435149988 -2.86004973688658 2.3640673001408 0.0108415740563455 0.0302418924359602 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP664) 0.436641295766847 -0.853202748138374 0.120337981154966 0.408026545336983 3.62845787818694 -2.09104715830125 0.0150849512735579 0.0907790704387733 1 1 FALSE FALSE FALSE TRUE Solobacterium moorei (SP674) -0.889099098230723 1.50602732591556 0.440222076569712 0.646517500589774 -2.01966040676274 2.32944556727655 0.0585609438302462 0.031678568720779 1 1 FALSE FALSE TRUE TRUE Prevotella multisaccharivorax (SP676) 0.0753899220636419 -0.248484512412403 0.526629733438253 0.655377207660119 0.143155460614495 -0.379147320822405 0.889707485957953 0.714443880177491 1 1 FALSE FALSE TRUE TRUE Ottowia sp._HMT_894 (SP682) -0.405114754901213 0.36496403155126 0.0863908583763462 0.448275391467448 -4.68932433957773 0.814151386620923 0.00223627265777056 0.442369359728046 0.561304437100411 1 FALSE FALSE FALSE TRUE Prevotella maculosa (SP683) 0.0528669876986583 -0.00612483904245578 0.263865185653676 0.487674558619488 0.20035605518663 -0.0125592753080948 0.843331117359312 0.990110351581514 1 1 FALSE FALSE TRUE TRUE Campylobacter sp._HMT_044 (SP684) 0.025473090994673 -0.0788497725908446 0.405066012613635 0.539327366325996 0.0628862708828895 -0.146200206987427 0.950985238968108 0.886408195887608 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_238 (SP687) -0.0770624488316165 -0.151728631593855 0.119616255992989 0.312391429537973 -0.644247290570051 -0.485700365782318 0.635649453354104 0.712157081292655 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP688) -0.726110405096427 1.06590961946796 0.36112279868506 0.661517498799576 -2.0107021980899 1.61130978606343 0.0626890662744876 0.127949768955712 1 1 FALSE FALSE TRUE TRUE Anaeroglobus geminatus (SP691) -0.0782016077112548 -0.00538984297255508 0.796233344719085 0.904618704444232 -0.0982144345372081 -0.00595813788292873 0.923260225744118 0.995336583491225 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-2] bacterium_HMT_088 (SP694) 0.186040531134348 -1.06844028418428 0.271469572154683 0.497566535559953 0.685308963570849 -2.14733147795375 0.54235379981675 0.121012256324515 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] bacterium_HMT_274 (SP696) -0.79651035048959 1.2097293851099 0.198646369719963 0.534331598980724 -4.0096899410367 2.26400495014246 0.00101121537076263 0.0378237449232681 0.258871134915234 1 FALSE FALSE TRUE TRUE Actinomyces graevenitzii (SP701) -0.105638348469128 0.17451613459384 0.588862284631814 0.873977610107263 -0.17939397924793 0.199680326561709 0.859749167967941 0.844099600574438 1 1 FALSE FALSE TRUE TRUE Oribacterium asaccharolyticum (SP702) -1.21266872276321 1.92731422722614 0.313995137080836 0.500350630875253 -3.86206211356393 3.85192724520949 0.00125051135293302 0.00127832127745948 0.318880394997919 0.333641853416925 FALSE FALSE TRUE TRUE Limosilactobacillus mucosae (SP709) -0.854894312687283 1.24625858779561 0.56933813819921 0.727896854389045 -1.50155813448801 1.71213624606421 0.167454829866015 0.121027483836624 1 1 FALSE FALSE TRUE TRUE Selenomonas flueggei (SP718) -0.70735224449786 0.970007015985157 0.207991445293742 0.452100451066429 -3.40087181710229 2.14555639946183 0.00526122901063756 0.053062465793974 1 1 FALSE FALSE FALSE TRUE Treponema sp._HMT_262 (SP72) 0.0472069768949371 0.826902977708176 0.462154154223439 0.556819601201921 0.102145521063766 1.48504646015203 0.923556928839091 0.211708121049322 1 1 FALSE FALSE TRUE FALSE Alloprevotella sp._HMT_473 (SP725) 0.371212931275157 -0.652014710791875 0.771748210658485 0.958155875856848 0.481002645873871 -0.680489184715169 0.637026264816486 0.505923462219841 1 1 FALSE FALSE TRUE TRUE Mycoplasma faucium (SP728) -0.502631895948771 0.955649282637084 0.247926499259938 0.451773245701248 -2.02734236739167 2.11532951924524 0.0732482558239672 0.0635176511425769 1 1 FALSE FALSE TRUE TRUE Rothia mucilaginosa (SP73) -0.229094327369168 0.48730746232624 0.474427287842156 0.620907204601487 -0.482886067559817 0.784831386582163 0.634693777036077 0.442228975630882 1 1 FALSE FALSE TRUE TRUE Pseudoramibacter alactolyticus (SP731) -0.385387616743205 0.288885100190581 0.265990258042167 0.53382944712811 -1.44887869044478 0.541156172153338 0.177993274734956 0.600246885172741 1 1 FALSE FALSE TRUE TRUE Leptotrichia hongkongensis (SP739) 0.590247281448143 -0.946540353104056 0.347581200767008 0.526834961343241 1.69815651751488 -1.79665440328925 0.105796098166517 0.0883074552579831 1 1 FALSE FALSE TRUE FALSE Dialister pneumosintes (SP757) -0.240237159302325 0.349244776549749 0.502689536122571 0.650421689485946 -0.47790364039674 0.53695130742914 0.640094823434031 0.599731493845762 1 1 FALSE FALSE TRUE TRUE Streptobacillus felis (SP758) -1.56709714559607 2.96047820438855 0.424541097797379 0.52591745923245 -3.69127312697533 5.62916889792786 0.0661884163628138 0.030138735364331 1 1 FALSE FALSE TRUE FALSE Lachnoanaerobaculum saburreum (SP76) -0.283096335260632 0.472012952604236 0.342280807931211 0.531716242986796 -0.827087960238561 0.887715880095763 0.41964582347134 0.387081107310402 1 1 FALSE FALSE TRUE TRUE Lancefieldella rimae (SP771) -0.942316218512883 1.63568074767382 0.399641382854224 0.555028733154446 -2.35790450874456 2.94701994683699 0.0314399643798322 0.00946905641730761 1 1 FALSE FALSE FALSE FALSE Oribacterium sp._HMT_102 (SP773) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Granulicatella adiacens (SP776) -0.388582038877894 0.766410957466511 0.35504360846017 0.534013647837689 -1.09446284799544 1.43518983188882 0.287433282383239 0.167490898312841 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_304 (SP779) -0.318101350517345 0.402244498978941 0.196261961227907 0.541912075047447 -1.62079981534452 0.742268935313394 0.165986677472737 0.491300449818221 1 1 FALSE FALSE TRUE TRUE Treponema sp._HMT_951 (SP780) -0.92733176739308 1.5957562873218 0.0675384594063616 0.297028618187158 -13.730425235399 5.37239912120626 0.00526251370640222 0.0329442634336604 1 1 FALSE FALSE FALSE FALSE Capnocytophaga sp._HMT_332 (SP787) 0.0717803214306447 -0.158780714230113 0.365816047260644 0.507438442426918 0.196219717445859 -0.312906356622716 0.847257919309055 0.758964489427148 1 1 FALSE FALSE TRUE TRUE Porphyromonas sp._HMT_930 (SP8) 1.88088801622853 -4.02127709926296 0.434643623951637 0.633906927169483 4.32742576349818 -6.34363962106983 0.000820533603803811 2.56124326592365e-05 0.210877136177579 0.0069409692506531 FALSE TRUE TRUE TRUE Veillonella sp._HMT_917 (SP803) -0.569161802838272 1.51442821287528 0.621872608602687 0.787684146079425 -0.915238579356545 1.92263386334879 0.37809110924977 0.07858051425461 1 1 FALSE FALSE TRUE TRUE Cloacibacterium sp._HMT_206 (SP809) 0.265729636076983 -0.554199690822174 0.520632565747208 0.663226072510126 0.510397646170309 -0.835612039081459 0.623554373375247 0.427622921530755 1 1 FALSE FALSE FALSE FALSE Pseudostreptobacillus hongkongensis (SP819) 0.264489206688342 -0.07315674553765 0.326596501107448 0.512653733968527 0.809834783261586 -0.142702063186652 0.477309355785634 0.895570800013859 1 1 FALSE FALSE TRUE TRUE Phocaeicola abscessus (SP820) -0.290914314864383 0.129755657192801 0.0742295146843349 0.362480923489787 -3.9191191819253 0.357965478413534 0.00442387766476568 0.729630289415593 1 1 FALSE FALSE FALSE FALSE Peptostreptococcus stomatis (SP833) -1.17584083435863 1.86900340391889 0.423034918924843 0.659850103584684 -2.7795361133475 2.83246663714288 0.0128464767565317 0.0114917728140335 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_914 (SP836) -0.681685435784756 1.52108300951978 0.406482731649502 0.532242029498288 -1.67703418302294 2.8578784184962 0.121690418608722 0.0155756474570047 1 1 FALSE FALSE TRUE FALSE Catonella morbi (SP84) -1.08737578215868 1.72893373793563 0.144751907663281 0.418647030706446 -7.51199621277609 4.12981249387614 8.50633206020128e-07 0.000700102789940343 0.000228820332419414 0.184827136544251 TRUE FALSE TRUE TRUE Megasphaera micronuciformis (SP851) -1.0240663749747 1.78444745563012 0.515259261849284 0.704905025377272 -1.98747785978517 2.53147217197816 0.0623018076997758 0.0208928098277463 1 1 FALSE FALSE FALSE TRUE Lachnospiraceae_[G-2] bacterium_HMT_096 (SP852) -0.43232846269691 0.690831634505913 0.338034027993256 0.61414659582422 -1.27894953435142 1.12486438775872 0.219153766965297 0.277238795135616 1 1 FALSE FALSE TRUE TRUE Capnocytophaga gingivalis (SP860) 0.253765930036881 -0.353490906644578 0.244641853040964 0.487499082606862 1.03729565028429 -0.725110916628425 0.313332894310309 0.477705513641855 1 1 FALSE FALSE TRUE TRUE Alloprevotella rava (SP870) -0.343285395983435 0.633079295964294 0.598331292857195 0.785809992969091 -0.573737994454801 0.805639151485308 0.573244871760021 0.430965809092012 1 1 FALSE FALSE TRUE TRUE Riemerella sp._HMT_322 (SP876) 0.279691155586551 -0.396699615894028 0.328596553584624 0.51511801224808 0.851168865088299 -0.770114044668618 0.405857058864465 0.451221892693622 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP89) -0.713072843594973 1.1271743196265 0.301666884736844 0.614227480510579 -2.36377567334583 1.83510890572582 0.0375625907807949 0.0936503218739884 1 1 FALSE FALSE FALSE TRUE Leptotrichia sp._HMT_498 (SP91) -0.178920902709722 0.354945427148574 0.449035160096795 0.624222268551226 -0.398456331729464 0.568620257608522 0.694980670371986 0.576640181930631 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_396 (SP96) -0.421981393783253 0.653903562425002 0.211243086176788 0.457374797314556 -1.99761043743747 1.42968866291792 0.0671269275552205 0.176396844841318 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_305 (SP99) -0.120775312357602 0.252843717262348 0.286557702891053 0.467282047891407 -0.421469432296222 0.54109443836607 0.684508657701755 0.603179235903768 1 1 FALSE FALSE TRUE TRUE Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP10) 0.158026588913477 -0.190154141168388 0.191062803716389 0.352628892840489 0.827092379257917 -0.539247194512799 0.418451622679277 0.595979501403073 1 1 FALSE FALSE TRUE TRUE Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP100) -0.302114154893155 0.627142278005159 0.304960844260166 0.709835785946442 -0.990665393867475 0.883503326292537 0.334980226756745 0.388612554287973 1 1 FALSE FALSE TRUE TRUE Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP101) 0.0320075269926054 0.00759109100422572 0.279886527473744 0.585016046699716 0.114358941394948 0.0129758680074671 0.910219226368138 0.989789786107809 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP102) -0.316836814628721 0.640856815030458 0.338641033216333 0.598644505396187 -0.935612591361063 1.07051314971368 0.361212986424394 0.297799609740652 1 1 FALSE FALSE TRUE TRUE Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP103) -0.0884026039466843 0.241096946336894 0.340632046275135 0.596116141439199 -0.259525211774349 0.404446264036426 0.798021271558998 0.690401267822793 1 1 FALSE FALSE TRUE TRUE Treponema medium_sp._HMT_237 (SPP105) -0.6774008548629 1.37937168865723 0.284696664174168 0.534088741895688 -2.37937756252911 2.58266385425258 0.0348022336489596 0.0239798099242209 1 1 FALSE FALSE FALSE FALSE Fusobacterium nucleatum_subsp._animalis_simiae (SPP106) -0.125126455722188 0.269481062195548 0.40135328775648 0.599565939640301 -0.311761382151946 0.449460258461678 0.758804095464435 0.658464794135247 1 1 FALSE FALSE TRUE TRUE Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP107) 0.504038928678244 -0.79567573575673 0.442677301935255 0.701982173934102 1.13861480241868 -1.1334700015209 0.2690173838796 0.271117221950914 1 1 FALSE FALSE TRUE TRUE Kingella_Neisseria denitrificans_elongata (SPP110) 0.365061326245798 -0.55246493149995 0.466634583980668 0.789592732459403 0.782328054495254 -0.699683404860055 0.443663215016983 0.492603373837741 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter_Peptostreptococcaceae_[G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP112) 0.306799733020897 -0.5869457225878 0.286923381954316 0.591914605808794 1.06927407216239 -0.991605405286115 0.304399063586266 0.339488840560567 1 1 FALSE FALSE TRUE TRUE Prevotella scopos_sp._HMT_314 (SPP114) 1.00449864394965 -1.48623960097639 0.252146884586845 0.612181145521543 3.98378368067316 -2.4277774835914 0.00135858521131657 0.029267593115415 0.343722058463092 1 FALSE FALSE FALSE FALSE Prevotella jejuni_scopos_sp._HMT_314 (SPP115) -0.34513651485209 0.657155631043788 0.469533282712509 0.706547419417589 -0.735062939219612 0.930094163510617 0.471770519136885 0.364629180802097 1 1 FALSE FALSE TRUE TRUE Fusobacterium hwasookii_sp._HMT_370 (SPP118) 0.790422665824616 -1.29684727576288 0.38894039880654 0.65225475492554 2.03224624711144 -1.98825269723166 0.0563477511828441 0.061385164116159 1 1 FALSE FALSE TRUE FALSE Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP119) 0.677601085195134 -1.09940950966129 0.466657832949133 0.668382785995213 1.45202981146358 -1.64488004882454 0.162807300628631 0.116438051658749 1 1 FALSE FALSE TRUE TRUE Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP12) 0.722057666281166 -1.57149487079487 0.588548526070345 0.746263833544456 1.22684474482035 -2.10581673686489 0.240113882477626 0.0537513546938201 1 1 FALSE FALSE FALSE FALSE Mogibacterium diversum_neglectum_pumilum_vescum (SPP120) -1.08289686558736 1.71332677927272 0.235935375758666 0.543200371611964 -4.58980287337256 3.15413403379745 0.000260662188180187 0.00579134300034332 0.0680328311150288 1 FALSE FALSE TRUE TRUE Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP121) 0.491298675119981 -2.08147660129951 0.161536401593271 0.323630080553014 3.04141153494932 -6.4316536885036 0.0160288610508739 0.000202208121272413 1 0.0543939846222792 FALSE FALSE TRUE TRUE Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP124) 0.157436739186744 -0.189121904146605 0.310017044435099 0.524869036304324 0.507832527316745 -0.360322082396476 0.617415528903161 0.722580852016073 1 1 FALSE FALSE TRUE TRUE Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP125) -0.115308683075272 0.253118107784022 0.478769866411144 0.656913145958559 -0.240843651960859 0.385314419937015 0.812398231850071 0.704519949991 1 1 FALSE FALSE TRUE TRUE Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP127) -0.685526260944493 0.989557522001792 0.315440043468184 0.602446174652496 -2.17323791046725 1.6425658650295 0.0488364080096679 0.124428522718431 1 1 FALSE FALSE FALSE TRUE Porphyromonas pasteri_sp._HMT_278 (SPP13) 0.0564754414386482 -0.0124396330874381 0.442038137872424 0.697059075004251 0.127761468072575 -0.0178458806914783 0.899680295336615 0.985947874802001 1 1 FALSE FALSE TRUE TRUE Porphyromonas endodontalis_sp._HMT_285 (SPP130) -0.8897140583319 1.54664241769259 0.643348744491998 0.849698035727275 -1.38294209159363 1.82022595399881 0.189975920997905 0.0918165123332116 1 1 FALSE FALSE TRUE TRUE Treponema maltophilum_sp._HMT_260 (SPP131) -0.874701811153672 1.25448966711749 0.0921910741630456 0.344350506351277 -9.48792298055566 3.64306032365108 1.2549948655281e-05 0.00655985892430561 0.00331318644499417 1 TRUE FALSE FALSE FALSE Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP132) 0.913654679061947 -1.52071676430628 0.701295986754536 0.826449337352197 1.3028089370512 -1.840060479906 0.211079672804418 0.0843851955601449 1 1 FALSE FALSE TRUE TRUE Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP133) 0.109569465083257 -0.105354174465503 0.319524760174649 0.655718592907877 0.342913848126722 -0.160669798912206 0.735428084953476 0.874049464950178 1 1 FALSE FALSE TRUE TRUE Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP143) -0.423116162477172 0.766130573453855 0.418231988480571 0.611609025078261 -1.01167814545785 1.25264759354364 0.325098894524002 0.226364484699848 1 1 FALSE FALSE TRUE TRUE Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP146) -0.677303528399571 0.66595800499497 0.0870445864314368 0.490604052602839 -7.78111030412063 1.35742459007791 0.000237249203706882 0.223480532220961 0.062159291371203 1 FALSE FALSE FALSE TRUE Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP15) 0.622788935714542 -1.11473624159057 0.558744025338763 0.712321644405694 1.11462298918892 -1.56493383339575 0.283781382189642 0.139916121629186 1 1 FALSE FALSE TRUE TRUE Catonella morbi_sp._HMT_164 (SPP155) -0.318175040704168 0.481894164318027 0.339581636706371 0.518157012411734 -0.936961856330552 0.930015714879697 0.363619910029659 0.367089344222671 1 1 FALSE FALSE TRUE TRUE Schaalia odontolytica_sp._HMT_180 (SPP158) -0.942537646450009 1.73583327071771 0.551921729975496 0.714500504925766 -1.70773788249261 2.42943603083676 0.103973261929103 0.0252099964361177 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum gingivalis_umeaense (SPP160) -0.472606904185606 0.913454471755007 0.45687485117466 0.660933797569914 -1.03443405337479 1.3820665172723 0.313920937109091 0.182985162771072 1 1 FALSE FALSE TRUE TRUE Campylobacter rectus_showae (SPP163) -0.22377467517122 0.477998070979832 0.256466563659615 0.569305635967027 -0.872529627168931 0.839615912405119 0.393812794646059 0.411564377726889 1 1 FALSE FALSE TRUE TRUE Prevotella jejuni_veroralis (SPP19) 0.198595633551329 -0.332624682348951 0.337177304159196 0.597411496013132 0.588994665719149 -0.556776500902219 0.564088899098284 0.585384603113645 1 1 FALSE FALSE TRUE TRUE Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP2) -0.00776921167949905 0.0878827732344486 0.240588747513633 0.561947446796101 -0.0322924981313135 0.15638966550254 0.974594177395952 0.877466554092582 1 1 FALSE FALSE TRUE TRUE Eikenella_Neisseria canis_halliae (SPP20) 0.388930233589162 -0.74138604216289 0.315680900882363 0.512778216589053 1.23203599743304 -1.44582203022296 0.239755588856653 0.171902004315798 1 1 FALSE FALSE TRUE TRUE Eikenella_Kingella halliae_sp._HMT_012 (SPP21) 0.269864758621946 -0.546195199173815 0.387307298164065 0.513777567492133 0.696771684657567 -1.06309662728157 0.501820986154727 0.312736035295749 1 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_212_sp._HMT_215_sp._HMT_217 (SPP22) 2.1367901100442 -2.69389921387043 NA 0.405066416165205 NA -6.65051237615248 1 0.0026542952624313 1 0.676845291919981 FALSE FALSE TRUE FALSE Leptotrichia sp._HMT_215_sp._HMT_217 (SPP23) 0.233353574060638 -0.635350412124111 0.176747763452048 0.383929658863772 1.32026323560212 -1.6548615025065 0.219336229106659 0.132337982011816 1 1 FALSE FALSE TRUE TRUE Veillonella parvula_rogosae_tobetsuensis (SPP24) -0.48741454412192 0.939367841643556 0.282449647246338 0.492237478016226 -1.72566880105473 1.90836310438879 0.100634298687456 0.0715700492460074 1 1 FALSE FALSE TRUE FALSE Kingella sp._HMT_459_sp._HMT_932 (SPP27) -0.145461231086697 0.297377474811086 0.270339940241387 0.466813081967876 -0.538067852485333 0.637037577347823 0.598980678545859 0.534379448743774 1 1 FALSE FALSE TRUE TRUE Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP3) -0.371255579112783 0.494638898765695 0.232331187252593 0.466640586881565 -1.59795842952909 1.05999973570931 0.138358035622031 0.311865174290818 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP30) 0.548600656105059 -0.839508316551557 0.464953263858627 0.642506623595045 1.17990494690208 -1.30661426002773 0.260900216215198 0.215831093833253 1 1 FALSE FALSE TRUE TRUE Tannerella sp._HMT_286_sp._HMT_808 (SPP33) 0.0837138233626003 -0.0601068014543542 0.28546381433857 0.586362072051033 0.293255464117469 -0.102507996883405 0.772505899102631 0.919427629263418 1 1 FALSE FALSE TRUE TRUE Prevotella histicola_melaninogenica (SPP34) -0.0957523971744065 0.167255649954006 0.367382945485528 0.673506450296552 -0.260633756550298 0.248335631945858 0.797505796869974 0.806849764686622 1 1 FALSE FALSE TRUE TRUE Prevotella fusca_histicola_jejuni_melaninogenica_scopos_sp._H ...(6 species) (SPP35) 1.41882736127723 -1.54992969297202 NA 0.506451298675218 NA -3.06037263015486 1 0.0280900835368044 1 1 FALSE FALSE TRUE FALSE Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_314 (SPP36) -0.0857911424958129 0.236526888797869 0.544366883555712 0.776635969823505 -0.157598019070226 0.304553095643536 0.876436361997757 0.764017231164044 1 1 FALSE FALSE TRUE TRUE Prevotella melaninogenica_scopos_sp._HMT_314 (SPP37) 0.0664886327521192 -0.0299627178860118 0.493580064614694 0.693073943976834 0.134706884493041 -0.0432316322758966 0.894260400839969 0.965967994307056 1 1 FALSE FALSE TRUE TRUE Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_314_ve ...(6 species) (SPP38) -0.0865405530475422 0.147178377610801 0.459744377507156 0.708802875068905 -0.188236240140197 0.207643595684475 0.853214383292488 0.838300066283329 1 1 FALSE FALSE TRUE TRUE Hallella_Prevotella dentalis_seregens (SPP39) -0.274460001148092 0.280288248941141 0.175507907267692 0.508370372820366 -1.56380419219217 0.551346545602455 0.148929325299245 0.593500704528863 1 1 FALSE FALSE TRUE TRUE Lactobacillus delbrueckii_equicursoris_leichmannii (SPP4) 1.76756841641425 -2.61988801614085 0.064992942831607 0.357301567751485 27.1963130057661 -7.3324279896893 0.00134927437399382 0.0180962935054611 0.34271569099443 1 FALSE FALSE FALSE FALSE Selenomonas sp._HMT_442_sputigena (SPP41) -0.546905128137513 1.04347636367084 0.347633380702706 0.612959212044862 -1.57322385736375 1.70235856345116 0.132171504067203 0.104993322313372 1 1 FALSE FALSE TRUE TRUE Prevotella sp._HMT_306_vespertina (SPP46) -0.337992467257948 0.58567031646194 0.522738323804858 0.747765539993699 -0.64658061570424 0.783227208446749 0.526537397140523 0.444268927417771 1 1 FALSE FALSE TRUE TRUE Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP5) 0.206738305274195 -0.275399644799645 0.390044928301043 0.535024023047152 0.530037157962047 -0.514742577783977 0.602226026338876 0.612669143354291 1 1 FALSE FALSE TRUE TRUE Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP50) 0.0470380526443279 0.00407579730262162 0.482605572080946 0.656131838207127 0.0974668660403248 0.00621185722942311 0.92337648435093 0.99510844641451 1 1 FALSE FALSE TRUE TRUE Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP51) -0.48588249955813 0.936686763656924 0.574746714654776 0.748876355396924 -0.845385431824482 1.25078960886735 0.408416049441947 0.226195407156553 1 1 FALSE FALSE TRUE TRUE Streptococcus lactarius_peroris_sp._HMT_074 (SPP52) 0.402040455959332 -0.592567165290348 0.363556059456806 0.543095669008329 1.10585546713216 -1.09109167887925 0.28419384223395 0.290456047093797 1 1 FALSE FALSE TRUE TRUE Alloprevotella sp._HMT_912_sp._HMT_913 (SPP54) 0.168800543807861 -0.368777443962729 0.186815595568224 0.435040875906395 0.903567731026053 -0.847684584108083 0.384004912478258 0.413202028973888 1 1 FALSE FALSE TRUE TRUE Prevotella shahii_sp._HMT_317 (SPP55) 0.419710714442603 -0.850145229673168 0.326362147978915 0.474955126892664 1.28602755264902 -1.7899485267906 0.217931303916427 0.0936652051746254 1 1 FALSE FALSE FALSE FALSE Bifidobacterium dentium_moukalabense (SPP57) 2.10938876684938 -2.9450454098471 0.321601259499386 0.611103357627226 6.55901898560011 -4.81922636013985 0.000316152617478838 0.00192317065025662 0.082199680544498 0.494254857115952 FALSE FALSE FALSE FALSE Veillonella atypica_dispar (SPP59) -0.646813698095144 1.2183163610967 0.374639853134452 0.541733095043377 -1.7264946392743 2.24892363461594 0.100482764979478 0.0365732767049882 1 1 FALSE FALSE TRUE TRUE Streptococcus anginosus_constellatus (SPP60) -0.569583409120323 1.01024265119244 0.392952518263485 0.67800200957556 -1.44949677797561 1.4900289924286 0.164398814351135 0.153531208155688 1 1 FALSE FALSE TRUE TRUE Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP64) 0.445857398735652 -0.849232422347884 0.51000513083545 0.705273225514142 0.874221398528449 -1.20411833545616 0.395779249643761 0.247201329305182 1 1 FALSE FALSE TRUE TRUE Streptococcus dentirousetti_downei_sobrinus (SPP65) -0.746645442952702 1.63773052054921 0.416042111533656 0.628777978206788 -1.79463910564328 2.60462448958511 0.097922295439429 0.0230287445833715 1 1 FALSE FALSE TRUE FALSE Kocuria assamensis_palustris (SPP66) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella loescheii_sp._HMT_472 (SPP68) -0.16362523810743 0.502728596191241 0.480518916876216 0.630157358211008 -0.340517786835811 0.797782632608572 0.738906436582017 0.439326763516476 1 1 FALSE FALSE TRUE FALSE Centipeda_Selenomonas dianae_noxia_periodontii (SPP7) -0.3212718508489 0.543439109675016 0.265293703713514 0.513902467190776 -1.2110044315105 1.05747519105269 0.245940555249675 0.308200968329544 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter_Peptostreptococcaceae_[G-7] bacterium_HMT_081_stomatis (SPP72) -1.86852649872016 2.78558720778665 0.072156555987518 0.374672934901384 -25.8954501520747 7.43471691788956 3.27475112673526e-08 0.000145083833216951 8.87457555345256e-06 0.0391726349685768 TRUE TRUE FALSE FALSE Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP76) -0.291018118363861 0.422161364695449 0.241856320450579 0.476076448754407 -1.20326860932017 0.886751205189797 0.256584862699052 0.396037944059453 1 1 FALSE FALSE TRUE TRUE Aggregatibacter aphrophilus_paraphrophilus (SPP78) 1.10255751665862 -2.61798067641802 0.294571452511938 0.420738072898583 3.74292046040657 -6.22235268223296 0.00723499389207969 0.000435678107660317 1 0.116326054745305 FALSE FALSE TRUE TRUE Leptotrichia buccalis_sp._HMT_225 (SPP8) 0.248726332127313 -0.441856284032344 0.22190775195754 0.441983257098494 1.12085463411348 -0.999712719737431 0.279974507259849 0.333304674090471 1 1 FALSE FALSE TRUE TRUE Streptococcus salivarius_thermophilus_vestibularis (SPP80) -0.428603709178141 0.836448880491943 0.69720650483134 0.875847376580706 -0.614744277639555 0.955016710511169 0.546016014249757 0.351563148527315 1 1 FALSE FALSE TRUE TRUE Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP81) 0.370818157050169 -0.548577951666724 0.547265336210484 0.768109604973647 0.677583856521745 -0.714192282083942 0.506652312574494 0.484267666966661 1 1 FALSE FALSE TRUE TRUE Lautropia dentalis_mirabilis (SPP82) 1.14867905185143 -2.1571946793425 0.684608216923255 0.906249314025022 1.67786337273862 -2.3803545513999 0.112796260611766 0.0300710245015942 1 1 FALSE FALSE FALSE TRUE Neisseria cinerea_flavescens_perflava_subflava (SPP87) -0.116979366909686 0.291106281522147 0.394087736270966 0.601535788215946 -0.296835846800505 0.483938424321385 0.769812473550779 0.633960443160591 1 1 FALSE FALSE TRUE TRUE Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP89) 0.0334774490157197 0.0278068536526872 0.419237934862351 0.57835742977605 0.0798531006663589 0.0480790117340663 0.937189174573882 0.96215506773476 1 1 FALSE FALSE TRUE TRUE Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP9) -0.0456715026183294 0.166317519012272 0.204570682994256 0.397061247796498 -0.223255365577538 0.418871194142606 0.825719508487696 0.680007442762292 1 1 FALSE FALSE TRUE TRUE Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP96) 0.287823022255015 -0.597132954345901 0.318718489248499 0.542771725171608 0.903063461845808 -1.10015486557835 0.382920801689374 0.291219890773044 1 1 FALSE FALSE TRUE TRUE Peptococcus sp._HMT_167_sp._HMT_168 (SPP97) -0.170156596165568 0.296839934788847 0.312992996649402 0.549948393488218 -0.543643461633641 0.539759617999878 0.594181479901998 0.59679563412099 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP99) -0.153458707832616 0.354945128137275 0.452283450611886 0.564998264923638 -0.339297640948403 0.628223394960775 0.738107049364574 0.53733665800281 1 1 FALSE FALSE TRUE TRUE